Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2101:A2084
Extra
PDB:
ATOM 1 O3' G A2100 -6.519 168.884 110.840 1.00 0.79 O
ATOM 2 P G A2101 -7.617 169.822 110.175 1.00 2.78 P
ATOM 3 OP1 G A2101 -8.965 169.193 110.253 1.00 2.78 O
ATOM 4 OP2 G A2101 -7.056 170.211 108.861 1.00 2.78 O
ATOM 5 O5' G A2101 -7.635 171.091 111.132 1.00 0.79 O
ATOM 6 C5' G A2101 -8.149 170.972 112.458 1.00 0.79 C
ATOM 7 C4' G A2101 -8.158 172.306 113.151 1.00 0.79 C
ATOM 8 O4' G A2101 -6.813 172.775 113.411 1.00 0.79 O
ATOM 9 C3' G A2101 -8.801 173.432 112.397 1.00 0.79 C
ATOM 10 O3' G A2101 -10.203 173.346 112.515 1.00 0.79 O
ATOM 11 C2' G A2101 -8.198 174.654 113.078 1.00 0.79 C
ATOM 12 O2' G A2101 -8.826 174.908 114.325 1.00 0.79 O
ATOM 13 C1' G A2101 -6.772 174.185 113.354 1.00 0.79 C
ATOM 14 N9 G A2101 -5.794 174.549 112.337 1.00 26.96 N
ATOM 15 C8 G A2101 -5.407 173.776 111.276 1.00 26.96 C
ATOM 16 N7 G A2101 -4.498 174.339 110.531 1.00 26.96 N
ATOM 17 C5 G A2101 -4.275 175.559 111.135 1.00 26.96 C
ATOM 18 C6 G A2101 -3.401 176.596 110.772 1.00 26.96 C
ATOM 19 O6 G A2101 -2.615 176.645 109.815 1.00 26.96 O
ATOM 20 N1 G A2101 -3.495 177.664 111.649 1.00 26.96 N
ATOM 21 C2 G A2101 -4.324 177.719 112.735 1.00 26.96 C
ATOM 22 N2 G A2101 -4.271 178.845 113.448 1.00 26.96 N
ATOM 23 N3 G A2101 -5.145 176.747 113.090 1.00 26.96 N
ATOM 24 C4 G A2101 -5.071 175.706 112.250 1.00 26.96 C
ATOM 25 P A A2102 -11.106 174.282 111.593 1.00 2.65 P
ATOM 26 OP1 A A2102 -12.520 173.821 111.617 1.00 2.65 O
ATOM 27 OP2 A A2102 -10.401 174.448 110.283 1.00 2.65 O
ATOM 28 O5' A A2102 -10.980 175.668 112.358 1.00 11.02 O
TER
ATOM 1 O3' C B2083 -3.393 179.217 104.389 1.00 13.05 O
ATOM 2 P U B2084 -2.186 178.700 105.337 1.00 24.20 P
ATOM 3 OP1 U B2084 -0.866 179.133 104.760 1.00 39.78 O
ATOM 4 OP2 U B2084 -2.413 177.258 105.609 1.00 39.78 O
ATOM 5 O5' U B2084 -2.407 179.532 106.675 1.00 0.79 O
ATOM 6 C5' U B2084 -2.306 180.958 106.628 1.00 0.79 C
ATOM 7 C4' U B2084 -2.376 181.568 108.004 1.00 0.79 C
ATOM 8 O4' U B2084 -3.697 181.398 108.554 1.00 0.79 O
ATOM 9 C3' U B2084 -1.390 181.084 109.045 1.00 0.79 C
ATOM 10 O3' U B2084 -0.907 182.201 109.755 1.00 0.79 O
ATOM 11 C2' U B2084 -2.244 180.218 109.961 1.00 0.79 C
ATOM 12 O2' U B2084 -1.796 180.264 111.301 1.00 0.79 O
ATOM 13 C1' U B2084 -3.604 180.895 109.859 1.00 0.79 C
ATOM 14 N1 U B2084 -4.742 179.994 110.056 1.00 13.87 N
ATOM 15 C2 U B2084 -5.633 180.292 111.072 1.00 13.87 C
ATOM 16 O2 U B2084 -5.458 181.203 111.869 1.00 13.87 O
ATOM 17 N3 U B2084 -6.730 179.476 111.129 1.00 13.87 N
ATOM 18 C4 U B2084 -6.998 178.400 110.310 1.00 13.87 C
ATOM 19 O4 U B2084 -8.090 177.833 110.389 1.00 13.87 O
ATOM 20 C5 U B2084 -5.993 178.128 109.335 1.00 13.87 C
ATOM 21 C6 U B2084 -4.932 178.916 109.241 1.00 13.87 C
ATOM 22 P A B2085 0.647 182.560 109.676 1.00 59.97 P
ATOM 23 OP1 A B2085 0.745 183.909 109.087 1.00 57.74 O
ATOM 24 OP2 A B2085 1.389 181.431 109.058 1.00 57.74 O
ATOM 25 O5' A B2085 1.066 182.647 111.197 1.00 13.29 O
TER
ATOM 2 P G A2101 -7.617 169.822 110.175 1.00 2.78 P
ATOM 3 OP1 G A2101 -8.965 169.193 110.253 1.00 2.78 O
ATOM 4 OP2 G A2101 -7.056 170.211 108.861 1.00 2.78 O
ATOM 5 O5' G A2101 -7.635 171.091 111.132 1.00 0.79 O
ATOM 6 C5' G A2101 -8.149 170.972 112.458 1.00 0.79 C
ATOM 7 C4' G A2101 -8.158 172.306 113.151 1.00 0.79 C
ATOM 8 O4' G A2101 -6.813 172.775 113.411 1.00 0.79 O
ATOM 9 C3' G A2101 -8.801 173.432 112.397 1.00 0.79 C
ATOM 10 O3' G A2101 -10.203 173.346 112.515 1.00 0.79 O
ATOM 11 C2' G A2101 -8.198 174.654 113.078 1.00 0.79 C
ATOM 12 O2' G A2101 -8.826 174.908 114.325 1.00 0.79 O
ATOM 13 C1' G A2101 -6.772 174.185 113.354 1.00 0.79 C
ATOM 14 N9 G A2101 -5.794 174.549 112.337 1.00 26.96 N
ATOM 15 C8 G A2101 -5.407 173.776 111.276 1.00 26.96 C
ATOM 16 N7 G A2101 -4.498 174.339 110.531 1.00 26.96 N
ATOM 17 C5 G A2101 -4.275 175.559 111.135 1.00 26.96 C
ATOM 18 C6 G A2101 -3.401 176.596 110.772 1.00 26.96 C
ATOM 19 O6 G A2101 -2.615 176.645 109.815 1.00 26.96 O
ATOM 20 N1 G A2101 -3.495 177.664 111.649 1.00 26.96 N
ATOM 21 C2 G A2101 -4.324 177.719 112.735 1.00 26.96 C
ATOM 22 N2 G A2101 -4.271 178.845 113.448 1.00 26.96 N
ATOM 23 N3 G A2101 -5.145 176.747 113.090 1.00 26.96 N
ATOM 24 C4 G A2101 -5.071 175.706 112.250 1.00 26.96 C
ATOM 25 P A A2102 -11.106 174.282 111.593 1.00 2.65 P
ATOM 26 OP1 A A2102 -12.520 173.821 111.617 1.00 2.65 O
ATOM 27 OP2 A A2102 -10.401 174.448 110.283 1.00 2.65 O
ATOM 28 O5' A A2102 -10.980 175.668 112.358 1.00 11.02 O
TER
ATOM 1 O3' C B2083 -3.393 179.217 104.389 1.00 13.05 O
ATOM 2 P U B2084 -2.186 178.700 105.337 1.00 24.20 P
ATOM 3 OP1 U B2084 -0.866 179.133 104.760 1.00 39.78 O
ATOM 4 OP2 U B2084 -2.413 177.258 105.609 1.00 39.78 O
ATOM 5 O5' U B2084 -2.407 179.532 106.675 1.00 0.79 O
ATOM 6 C5' U B2084 -2.306 180.958 106.628 1.00 0.79 C
ATOM 7 C4' U B2084 -2.376 181.568 108.004 1.00 0.79 C
ATOM 8 O4' U B2084 -3.697 181.398 108.554 1.00 0.79 O
ATOM 9 C3' U B2084 -1.390 181.084 109.045 1.00 0.79 C
ATOM 10 O3' U B2084 -0.907 182.201 109.755 1.00 0.79 O
ATOM 11 C2' U B2084 -2.244 180.218 109.961 1.00 0.79 C
ATOM 12 O2' U B2084 -1.796 180.264 111.301 1.00 0.79 O
ATOM 13 C1' U B2084 -3.604 180.895 109.859 1.00 0.79 C
ATOM 14 N1 U B2084 -4.742 179.994 110.056 1.00 13.87 N
ATOM 15 C2 U B2084 -5.633 180.292 111.072 1.00 13.87 C
ATOM 16 O2 U B2084 -5.458 181.203 111.869 1.00 13.87 O
ATOM 17 N3 U B2084 -6.730 179.476 111.129 1.00 13.87 N
ATOM 18 C4 U B2084 -6.998 178.400 110.310 1.00 13.87 C
ATOM 19 O4 U B2084 -8.090 177.833 110.389 1.00 13.87 O
ATOM 20 C5 U B2084 -5.993 178.128 109.335 1.00 13.87 C
ATOM 21 C6 U B2084 -4.932 178.916 109.241 1.00 13.87 C
ATOM 22 P A B2085 0.647 182.560 109.676 1.00 59.97 P
ATOM 23 OP1 A B2085 0.745 183.909 109.087 1.00 57.74 O
ATOM 24 OP2 A B2085 1.389 181.431 109.058 1.00 57.74 O
ATOM 25 O5' A B2085 1.066 182.647 111.197 1.00 13.29 O
TER
Atoms:
OP1: (-8.965,169.193,110.253)
OP2: (-7.056,170.211,108.861)
C3': (-8.801,173.432,112.397)
C1': (-6.772,174.185,113.354)
C5': (-8.149,170.972,112.458)
O6: (-2.615,176.645,109.815)
O4': (-6.813,172.775,113.411)
C8: (-5.407,173.776,111.276)
C2: (-4.324,177.719,112.735)
C6: (-3.401,176.596,110.772)
C5: (-4.275,175.559,111.135)
C4: (-5.071,175.706,112.250)
P: (-7.617,169.822,110.175)
C4': (-8.158,172.306,113.151)
C2': (-8.198,174.654,113.078)
O2': (-8.826,174.908,114.325)
N1: (-3.495,177.664,111.649)
N2: (-4.271,178.845,113.448)
N3: (-5.145,176.747,113.090)
N7: (-4.498,174.339,110.531)
N9: (-5.794,174.549,112.337)
O5': (-7.635,171.091,111.132)
O3': (-10.203,173.346,112.515)
OP2: (-7.056,170.211,108.861)
C3': (-8.801,173.432,112.397)
C1': (-6.772,174.185,113.354)
C5': (-8.149,170.972,112.458)
O6: (-2.615,176.645,109.815)
O4': (-6.813,172.775,113.411)
C8: (-5.407,173.776,111.276)
C2: (-4.324,177.719,112.735)
C6: (-3.401,176.596,110.772)
C5: (-4.275,175.559,111.135)
C4: (-5.071,175.706,112.250)
P: (-7.617,169.822,110.175)
C4': (-8.158,172.306,113.151)
C2': (-8.198,174.654,113.078)
O2': (-8.826,174.908,114.325)
N1: (-3.495,177.664,111.649)
N2: (-4.271,178.845,113.448)
N3: (-5.145,176.747,113.090)
N7: (-4.498,174.339,110.531)
N9: (-5.794,174.549,112.337)
O5': (-7.635,171.091,111.132)
O3': (-10.203,173.346,112.515)
C4: (-6.998,178.400,110.310)
N3: (-6.730,179.476,111.129)
OP1: (-0.866,179.133,104.760)
OP2: (-2.413,177.258,105.609)
C2: (-5.633,180.292,111.072)
C1': (-3.604,180.895,109.859)
C3': (-1.390,181.084,109.045)
O5': (-2.407,179.532,106.675)
O4': (-3.697,181.398,108.554)
C5': (-2.306,180.958,106.628)
P: (-2.186,178.700,105.337)
C4': (-2.376,181.568,108.004)
C2': (-2.244,180.218,109.961)
O2': (-1.796,180.264,111.301)
N1: (-4.742,179.994,110.056)
O4: (-8.090,177.833,110.389)
O2: (-5.458,181.203,111.869)
C6: (-4.932,178.916,109.241)
C5: (-5.993,178.128,109.335)
O3': (-0.907,182.201,109.755)
N3: (-6.730,179.476,111.129)
OP1: (-0.866,179.133,104.760)
OP2: (-2.413,177.258,105.609)
C2: (-5.633,180.292,111.072)
C1': (-3.604,180.895,109.859)
C3': (-1.390,181.084,109.045)
O5': (-2.407,179.532,106.675)
O4': (-3.697,181.398,108.554)
C5': (-2.306,180.958,106.628)
P: (-2.186,178.700,105.337)
C4': (-2.376,181.568,108.004)
C2': (-2.244,180.218,109.961)
O2': (-1.796,180.264,111.301)
N1: (-4.742,179.994,110.056)
O4: (-8.090,177.833,110.389)
O2: (-5.458,181.203,111.869)
C6: (-4.932,178.916,109.241)
C5: (-5.993,178.128,109.335)
O3': (-0.907,182.201,109.755)
Image (generated by PyMOL):