Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2101:A2084
Extra
PDB:
ATOM 1 O3' G A2100 -60.004 -0.499 56.412 1.00 5.87 O
ATOM 2 P G A2101 -61.115 0.134 57.365 1.00 25.68 P
ATOM 3 OP1 G A2101 -62.442 0.080 56.724 1.00 25.68 O
ATOM 4 OP2 G A2101 -60.558 1.436 57.805 1.00 25.68 O
ATOM 5 O5' G A2101 -61.162 -0.860 58.601 1.00 5.75 O
ATOM 6 C5' G A2101 -61.679 -2.174 58.437 1.00 5.75 C
ATOM 7 C4' G A2101 -61.694 -2.910 59.749 1.00 5.75 C
ATOM 8 O4' G A2101 -60.348 -3.173 60.204 1.00 5.75 O
ATOM 9 C3' G A2101 -62.325 -2.181 60.898 1.00 5.75 C
ATOM 10 O3' G A2101 -63.730 -2.273 60.827 1.00 5.75 O
ATOM 11 C2' G A2101 -61.717 -2.886 62.108 1.00 5.75 C
ATOM 12 O2' G A2101 -62.355 -4.125 62.408 1.00 5.75 O
ATOM 13 C1' G A2101 -60.300 -3.166 61.617 1.00 5.75 C
ATOM 14 N9 G A2101 -59.306 -2.176 62.012 1.00 39.07 N
ATOM 15 C8 G A2101 -58.887 -1.105 61.264 1.00 39.07 C
ATOM 16 N7 G A2101 -57.966 -0.397 61.851 1.00 39.07 N
ATOM 17 C5 G A2101 -57.767 -1.034 63.063 1.00 39.07 C
ATOM 18 C6 G A2101 -56.880 -0.723 64.116 1.00 39.07 C
ATOM 19 O6 G A2101 -56.066 0.209 64.190 1.00 39.07 O
ATOM 20 N1 G A2101 -57.000 -1.627 65.163 1.00 39.07 N
ATOM 21 C2 G A2101 -57.863 -2.696 65.188 1.00 39.07 C
ATOM 22 N2 G A2101 -57.831 -3.445 66.296 1.00 39.07 N
ATOM 23 N3 G A2101 -58.693 -3.002 64.204 1.00 39.07 N
ATOM 24 C4 G A2101 -58.593 -2.133 63.181 1.00 39.07 C
ATOM 25 P A A2102 -64.617 -1.350 61.791 1.00 14.37 P
ATOM 26 OP1 A A2102 -66.043 -1.355 61.332 1.00 14.37 O
ATOM 27 OP2 A A2102 -63.896 -0.053 61.975 1.00 14.37 O
ATOM 28 O5' A A2102 -64.515 -2.137 63.162 1.00 8.04 O
TER
ATOM 1 O3' C B2083 -56.681 5.655 66.868 1.00 16.69 O
ATOM 2 P U B2084 -55.550 4.649 66.357 1.00 37.59 P
ATOM 3 OP1 U B2084 -54.240 5.178 66.806 1.00 53.17 O
ATOM 4 OP2 U B2084 -55.791 4.425 64.909 1.00 53.17 O
ATOM 5 O5' U B2084 -55.855 3.310 67.179 1.00 26.88 O
ATOM 6 C5' U B2084 -55.759 3.300 68.624 1.00 26.88 C
ATOM 7 C4' U B2084 -55.829 1.887 69.180 1.00 26.88 C
ATOM 8 O4' U B2084 -57.159 1.341 69.022 1.00 26.88 O
ATOM 9 C3' U B2084 -54.859 0.843 68.648 1.00 26.88 C
ATOM 10 O3' U B2084 -54.376 0.108 69.747 1.00 26.88 O
ATOM 11 C2' U B2084 -55.730 -0.041 67.757 1.00 26.88 C
ATOM 12 O2' U B2084 -55.319 -1.392 67.719 1.00 26.88 O
ATOM 13 C1' U B2084 -57.086 0.054 68.449 1.00 26.88 C
ATOM 14 N1 U B2084 -58.234 -0.089 67.544 1.00 25.63 N
ATOM 15 C2 U B2084 -59.151 -1.082 67.823 1.00 25.63 C
ATOM 16 O2 U B2084 -59.007 -1.877 68.735 1.00 25.63 O
ATOM 17 N3 U B2084 -60.238 -1.116 66.986 1.00 25.63 N
ATOM 18 C4 U B2084 -60.484 -0.284 65.915 1.00 25.63 C
ATOM 19 O4 U B2084 -61.569 -0.353 65.328 1.00 25.63 O
ATOM 20 C5 U B2084 -59.465 0.686 65.669 1.00 25.63 C
ATOM 21 C6 U B2084 -58.405 0.752 66.471 1.00 25.63 C
ATOM 22 P A B2085 -52.814 0.148 70.089 1.00 55.18 P
ATOM 23 OP1 A B2085 -52.701 0.696 71.463 1.00 52.95 O
ATOM 24 OP2 A B2085 -52.063 0.777 68.979 1.00 52.95 O
ATOM 25 O5' A B2085 -52.408 -1.382 70.119 1.00 29.78 O
TER
ATOM 2 P G A2101 -61.115 0.134 57.365 1.00 25.68 P
ATOM 3 OP1 G A2101 -62.442 0.080 56.724 1.00 25.68 O
ATOM 4 OP2 G A2101 -60.558 1.436 57.805 1.00 25.68 O
ATOM 5 O5' G A2101 -61.162 -0.860 58.601 1.00 5.75 O
ATOM 6 C5' G A2101 -61.679 -2.174 58.437 1.00 5.75 C
ATOM 7 C4' G A2101 -61.694 -2.910 59.749 1.00 5.75 C
ATOM 8 O4' G A2101 -60.348 -3.173 60.204 1.00 5.75 O
ATOM 9 C3' G A2101 -62.325 -2.181 60.898 1.00 5.75 C
ATOM 10 O3' G A2101 -63.730 -2.273 60.827 1.00 5.75 O
ATOM 11 C2' G A2101 -61.717 -2.886 62.108 1.00 5.75 C
ATOM 12 O2' G A2101 -62.355 -4.125 62.408 1.00 5.75 O
ATOM 13 C1' G A2101 -60.300 -3.166 61.617 1.00 5.75 C
ATOM 14 N9 G A2101 -59.306 -2.176 62.012 1.00 39.07 N
ATOM 15 C8 G A2101 -58.887 -1.105 61.264 1.00 39.07 C
ATOM 16 N7 G A2101 -57.966 -0.397 61.851 1.00 39.07 N
ATOM 17 C5 G A2101 -57.767 -1.034 63.063 1.00 39.07 C
ATOM 18 C6 G A2101 -56.880 -0.723 64.116 1.00 39.07 C
ATOM 19 O6 G A2101 -56.066 0.209 64.190 1.00 39.07 O
ATOM 20 N1 G A2101 -57.000 -1.627 65.163 1.00 39.07 N
ATOM 21 C2 G A2101 -57.863 -2.696 65.188 1.00 39.07 C
ATOM 22 N2 G A2101 -57.831 -3.445 66.296 1.00 39.07 N
ATOM 23 N3 G A2101 -58.693 -3.002 64.204 1.00 39.07 N
ATOM 24 C4 G A2101 -58.593 -2.133 63.181 1.00 39.07 C
ATOM 25 P A A2102 -64.617 -1.350 61.791 1.00 14.37 P
ATOM 26 OP1 A A2102 -66.043 -1.355 61.332 1.00 14.37 O
ATOM 27 OP2 A A2102 -63.896 -0.053 61.975 1.00 14.37 O
ATOM 28 O5' A A2102 -64.515 -2.137 63.162 1.00 8.04 O
TER
ATOM 1 O3' C B2083 -56.681 5.655 66.868 1.00 16.69 O
ATOM 2 P U B2084 -55.550 4.649 66.357 1.00 37.59 P
ATOM 3 OP1 U B2084 -54.240 5.178 66.806 1.00 53.17 O
ATOM 4 OP2 U B2084 -55.791 4.425 64.909 1.00 53.17 O
ATOM 5 O5' U B2084 -55.855 3.310 67.179 1.00 26.88 O
ATOM 6 C5' U B2084 -55.759 3.300 68.624 1.00 26.88 C
ATOM 7 C4' U B2084 -55.829 1.887 69.180 1.00 26.88 C
ATOM 8 O4' U B2084 -57.159 1.341 69.022 1.00 26.88 O
ATOM 9 C3' U B2084 -54.859 0.843 68.648 1.00 26.88 C
ATOM 10 O3' U B2084 -54.376 0.108 69.747 1.00 26.88 O
ATOM 11 C2' U B2084 -55.730 -0.041 67.757 1.00 26.88 C
ATOM 12 O2' U B2084 -55.319 -1.392 67.719 1.00 26.88 O
ATOM 13 C1' U B2084 -57.086 0.054 68.449 1.00 26.88 C
ATOM 14 N1 U B2084 -58.234 -0.089 67.544 1.00 25.63 N
ATOM 15 C2 U B2084 -59.151 -1.082 67.823 1.00 25.63 C
ATOM 16 O2 U B2084 -59.007 -1.877 68.735 1.00 25.63 O
ATOM 17 N3 U B2084 -60.238 -1.116 66.986 1.00 25.63 N
ATOM 18 C4 U B2084 -60.484 -0.284 65.915 1.00 25.63 C
ATOM 19 O4 U B2084 -61.569 -0.353 65.328 1.00 25.63 O
ATOM 20 C5 U B2084 -59.465 0.686 65.669 1.00 25.63 C
ATOM 21 C6 U B2084 -58.405 0.752 66.471 1.00 25.63 C
ATOM 22 P A B2085 -52.814 0.148 70.089 1.00 55.18 P
ATOM 23 OP1 A B2085 -52.701 0.696 71.463 1.00 52.95 O
ATOM 24 OP2 A B2085 -52.063 0.777 68.979 1.00 52.95 O
ATOM 25 O5' A B2085 -52.408 -1.382 70.119 1.00 29.78 O
TER
Atoms:
OP1: (-62.442,0.080,56.724)
OP2: (-60.558,1.436,57.805)
C3': (-62.325,-2.181,60.898)
C1': (-60.300,-3.166,61.617)
C5': (-61.679,-2.174,58.437)
O6: (-56.066,0.209,64.190)
O4': (-60.348,-3.173,60.204)
C8: (-58.887,-1.105,61.264)
C2: (-57.863,-2.696,65.188)
C6: (-56.880,-0.723,64.116)
C5: (-57.767,-1.034,63.063)
C4: (-58.593,-2.133,63.181)
P: (-61.115,0.134,57.365)
C4': (-61.694,-2.910,59.749)
C2': (-61.717,-2.886,62.108)
O2': (-62.355,-4.125,62.408)
N1: (-57.000,-1.627,65.163)
N2: (-57.831,-3.445,66.296)
N3: (-58.693,-3.002,64.204)
N7: (-57.966,-0.397,61.851)
N9: (-59.306,-2.176,62.012)
O5': (-61.162,-0.860,58.601)
O3': (-63.730,-2.273,60.827)
OP2: (-60.558,1.436,57.805)
C3': (-62.325,-2.181,60.898)
C1': (-60.300,-3.166,61.617)
C5': (-61.679,-2.174,58.437)
O6: (-56.066,0.209,64.190)
O4': (-60.348,-3.173,60.204)
C8: (-58.887,-1.105,61.264)
C2: (-57.863,-2.696,65.188)
C6: (-56.880,-0.723,64.116)
C5: (-57.767,-1.034,63.063)
C4: (-58.593,-2.133,63.181)
P: (-61.115,0.134,57.365)
C4': (-61.694,-2.910,59.749)
C2': (-61.717,-2.886,62.108)
O2': (-62.355,-4.125,62.408)
N1: (-57.000,-1.627,65.163)
N2: (-57.831,-3.445,66.296)
N3: (-58.693,-3.002,64.204)
N7: (-57.966,-0.397,61.851)
N9: (-59.306,-2.176,62.012)
O5': (-61.162,-0.860,58.601)
O3': (-63.730,-2.273,60.827)
C4: (-60.484,-0.284,65.915)
N3: (-60.238,-1.116,66.986)
OP1: (-54.240,5.178,66.806)
OP2: (-55.791,4.425,64.909)
C2: (-59.151,-1.082,67.823)
C1': (-57.086,0.054,68.449)
C3': (-54.859,0.843,68.648)
O5': (-55.855,3.310,67.179)
O4': (-57.159,1.341,69.022)
C5': (-55.759,3.300,68.624)
P: (-55.550,4.649,66.357)
C4': (-55.829,1.887,69.180)
C2': (-55.730,-0.041,67.757)
O2': (-55.319,-1.392,67.719)
N1: (-58.234,-0.089,67.544)
O4: (-61.569,-0.353,65.328)
O2: (-59.007,-1.877,68.735)
C6: (-58.405,0.752,66.471)
C5: (-59.465,0.686,65.669)
O3': (-54.376,0.108,69.747)
N3: (-60.238,-1.116,66.986)
OP1: (-54.240,5.178,66.806)
OP2: (-55.791,4.425,64.909)
C2: (-59.151,-1.082,67.823)
C1': (-57.086,0.054,68.449)
C3': (-54.859,0.843,68.648)
O5': (-55.855,3.310,67.179)
O4': (-57.159,1.341,69.022)
C5': (-55.759,3.300,68.624)
P: (-55.550,4.649,66.357)
C4': (-55.829,1.887,69.180)
C2': (-55.730,-0.041,67.757)
O2': (-55.319,-1.392,67.719)
N1: (-58.234,-0.089,67.544)
O4: (-61.569,-0.353,65.328)
O2: (-59.007,-1.877,68.735)
C6: (-58.405,0.752,66.471)
C5: (-59.465,0.686,65.669)
O3': (-54.376,0.108,69.747)
Image (generated by PyMOL):