ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1857:A1881

Extra

PDB:
ATOM 1 O3' U A1856 89.014 -26.642 4.140 1.00 49.19 O
ATOM 2 P C A1857 89.043 -28.204 3.760 1.00 46.63 P
ATOM 3 OP1 C A1857 87.932 -28.442 2.806 1.00 76.72 O
ATOM 4 OP2 C A1857 89.066 -28.967 5.043 1.00 73.71 O
ATOM 5 O5' C A1857 90.438 -28.367 3.014 1.00 38.01 O
ATOM 6 C5' C A1857 90.880 -29.641 2.606 1.00 46.93 C
ATOM 7 C4' C A1857 92.329 -29.639 2.208 1.00 47.08 C
ATOM 8 O4' C A1857 92.649 -28.444 1.460 1.00 46.70 O
ATOM 9 C3' C A1857 93.327 -29.649 3.334 1.00 42.76 C
ATOM 10 O3' C A1857 93.495 -30.943 3.876 1.00 48.25 O
ATOM 11 C2' C A1857 94.574 -29.134 2.652 1.00 45.25 C
ATOM 12 O2' C A1857 95.172 -30.186 1.930 1.00 59.53 O
ATOM 13 C1' C A1857 94.001 -28.127 1.646 1.00 43.32 C
ATOM 14 N1 C A1857 94.090 -26.729 2.112 1.00 41.78 N
ATOM 15 C2 C A1857 95.297 -26.127 2.427 1.00 46.44 C
ATOM 16 O2 C A1857 96.328 -26.788 2.329 1.00 58.35 O
ATOM 17 N3 C A1857 95.335 -24.848 2.848 1.00 47.53 N
ATOM 18 C4 C A1857 94.215 -24.143 2.955 1.00 49.12 C
ATOM 19 N4 C A1857 94.280 -22.864 3.373 1.00 48.35 N
ATOM 20 C5 C A1857 92.969 -24.738 2.630 1.00 52.88 C
ATOM 21 C6 C A1857 92.954 -26.006 2.215 1.00 49.53 C
ATOM 22 P C A1858 93.118 -31.233 5.410 1.00 51.92 P
ATOM 23 OP1 C A1858 93.090 -32.710 5.590 1.00 46.24 O
ATOM 24 OP2 C A1858 91.895 -30.468 5.710 1.00 50.51 O
ATOM 25 O5' C A1858 94.368 -30.611 6.183 1.00 53.54 O
TER

ATOM 1 O3' G B1880 91.410 -19.122 0.797 1.00 51.15 O
ATOM 2 P C B1881 91.873 -20.641 1.124 1.00 49.90 P
ATOM 3 OP1 C B1881 90.710 -21.518 0.892 1.00 55.10 O
ATOM 4 OP2 C B1881 92.493 -20.639 2.473 1.00 48.94 O
ATOM 5 O5' C B1881 92.973 -20.920 0.007 1.00 47.70 O
ATOM 6 C5' C B1881 94.294 -20.450 0.151 1.00 43.07 C
ATOM 7 C4' C B1881 95.280 -21.501 -0.241 1.00 36.36 C
ATOM 8 O4' C B1881 94.936 -22.752 0.390 1.00 41.80 O
ATOM 9 C3' C B1881 95.317 -21.836 -1.705 1.00 39.06 C
ATOM 10 O3' C B1881 96.075 -20.914 -2.439 1.00 43.57 O
ATOM 11 C2' C B1881 95.897 -23.242 -1.708 1.00 43.75 C
ATOM 12 O2' C B1881 97.296 -23.211 -1.493 1.00 51.89 O
ATOM 13 C1' C B1881 95.250 -23.826 -0.470 1.00 44.89 C
ATOM 14 N1 C B1881 94.010 -24.565 -0.791 1.00 52.24 N
ATOM 15 C2 C B1881 94.127 -25.904 -1.201 1.00 51.05 C
ATOM 16 O2 C B1881 95.241 -26.422 -1.295 1.00 55.99 O
ATOM 17 N3 C B1881 93.024 -26.618 -1.500 1.00 54.40 N
ATOM 18 C4 C B1881 91.827 -26.041 -1.396 1.00 51.95 C
ATOM 19 N4 C B1881 90.780 -26.801 -1.709 1.00 52.05 N
ATOM 20 C5 C B1881 91.660 -24.677 -0.984 1.00 50.12 C
ATOM 21 C6 C B1881 92.771 -23.976 -0.694 1.00 52.86 C
ATOM 22 P A B1882 95.488 -20.292 -3.776 1.00 47.74 P
ATOM 23 OP1 A B1882 95.458 -21.378 -4.789 1.00 60.06 O
ATOM 24 OP2 A B1882 96.257 -19.057 -4.074 1.00 60.31 O
ATOM 25 O5' A B1882 94.027 -19.919 -3.353 1.00 49.81 O
TER

Atoms:
C2: (95.297,-26.127,2.427)
OP1: (87.932,-28.442,2.806)
OP2: (89.066,-28.967,5.043)
C4: (94.215,-24.143,2.955)
O5': (90.438,-28.367,3.014)
C3': (93.327,-29.649,3.334)
C1': (94.001,-28.127,1.646)
O4': (92.649,-28.444,1.460)
C5': (90.880,-29.641,2.606)
P: (89.043,-28.204,3.760)
O2: (96.328,-26.788,2.329)
C4': (92.329,-29.639,2.208)
C2': (94.574,-29.134,2.652)
O2': (95.172,-30.186,1.930)
N1: (94.090,-26.729,2.112)
N3: (95.335,-24.848,2.848)
N4: (94.280,-22.864,3.373)
C6: (92.954,-26.006,2.215)
C5: (92.969,-24.738,2.630)
O3': (93.495,-30.943,3.876)
C2: (94.127,-25.904,-1.201)
OP1: (90.710,-21.518,0.892)
OP2: (92.493,-20.639,2.473)
C4: (91.827,-26.041,-1.396)
O5': (92.973,-20.920,0.007)
C3': (95.317,-21.836,-1.705)
C1': (95.250,-23.826,-0.470)
O4': (94.936,-22.752,0.390)
C5': (94.294,-20.450,0.151)
P: (91.873,-20.641,1.124)
O2: (95.241,-26.422,-1.295)
C4': (95.280,-21.501,-0.241)
C2': (95.897,-23.242,-1.708)
O2': (97.296,-23.211,-1.493)
N1: (94.010,-24.565,-0.791)
N3: (93.024,-26.618,-1.500)
N4: (90.780,-26.801,-1.709)
C6: (92.771,-23.976,-0.694)
C5: (91.660,-24.677,-0.984)
O3': (96.075,-20.914,-2.439)
Image (generated by PyMOL):
PyMOL image
show in jmol