Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2054:A2037
Extra
PDB:
ATOM 1 O3' G A2053 60.484 0.312 -54.688 1.00 33.58 O
ATOM 2 P G A2054 61.494 0.926 -55.758 1.00 51.21 P
ATOM 3 OP1 G A2054 62.836 0.889 -55.162 1.00 55.12 O
ATOM 4 OP2 G A2054 60.932 2.229 -56.177 1.00 59.88 O
ATOM 5 O5' G A2054 61.421 -0.112 -56.957 1.00 41.32 O
ATOM 6 C5' G A2054 61.917 -1.419 -56.792 1.00 39.34 C
ATOM 7 C4' G A2054 61.949 -2.159 -58.093 1.00 45.91 C
ATOM 8 O4' G A2054 60.602 -2.414 -58.548 1.00 49.97 O
ATOM 9 C3' G A2054 62.597 -1.431 -59.247 1.00 47.51 C
ATOM 10 O3' G A2054 64.003 -1.520 -59.223 1.00 47.31 O
ATOM 11 C2' G A2054 61.968 -2.097 -60.459 1.00 48.71 C
ATOM 12 O2' G A2054 62.612 -3.326 -60.750 1.00 40.74 O
ATOM 13 C1' G A2054 60.556 -2.390 -59.947 1.00 45.77 C
ATOM 14 N9 G A2054 59.608 -1.350 -60.331 1.00 49.32 N
ATOM 15 C8 G A2054 59.319 -0.253 -59.586 1.00 48.32 C
ATOM 16 N7 G A2054 58.427 0.492 -60.167 1.00 60.03 N
ATOM 17 C5 G A2054 58.105 -0.157 -61.351 1.00 59.61 C
ATOM 18 C6 G A2054 57.191 0.179 -62.396 1.00 64.22 C
ATOM 19 O6 G A2054 56.441 1.166 -62.490 1.00 69.58 O
ATOM 20 N1 G A2054 57.202 -0.779 -63.407 1.00 57.18 N
ATOM 21 C2 G A2054 57.992 -1.908 -63.405 1.00 55.91 C
ATOM 22 N2 G A2054 57.892 -2.737 -64.448 1.00 55.77 N
ATOM 23 N3 G A2054 58.831 -2.225 -62.443 1.00 59.94 N
ATOM 24 C4 G A2054 58.834 -1.312 -61.454 1.00 57.13 C
ATOM 25 P A A2055 64.873 -0.481 -60.062 1.00 53.93 P
ATOM 26 OP1 A A2055 66.294 -0.666 -59.655 1.00 46.19 O
ATOM 27 OP2 A A2055 64.242 0.858 -59.887 1.00 45.60 O
ATOM 28 O5' A A2055 64.663 -0.984 -61.539 1.00 30.29 O
TER
ATOM 1 O3' C B2036 56.965 6.065 -65.601 1.00 42.87 O
ATOM 2 P U B2037 55.850 5.299 -64.760 1.00 56.56 P
ATOM 3 OP1 U B2037 54.638 6.150 -64.769 1.00 67.74 O
ATOM 4 OP2 U B2037 56.463 4.939 -63.457 1.00 73.07 O
ATOM 5 O5' U B2037 55.602 3.991 -65.625 1.00 43.07 O
ATOM 6 C5' U B2037 55.788 4.007 -67.028 1.00 48.59 C
ATOM 7 C4' U B2037 55.845 2.613 -67.594 1.00 53.48 C
ATOM 8 O4' U B2037 57.200 2.093 -67.455 1.00 57.46 O
ATOM 9 C3' U B2037 54.926 1.598 -66.910 1.00 52.45 C
ATOM 10 O3' U B2037 54.487 0.635 -67.874 1.00 55.76 O
ATOM 11 C2' U B2037 55.876 0.933 -65.921 1.00 52.04 C
ATOM 12 O2' U B2037 55.486 -0.348 -65.473 1.00 57.67 O
ATOM 13 C1' U B2037 57.160 0.879 -66.732 1.00 51.78 C
ATOM 14 N1 U B2037 58.360 0.779 -65.897 1.00 53.06 N
ATOM 15 C2 U B2037 59.258 -0.232 -66.185 1.00 57.24 C
ATOM 16 O2 U B2037 59.115 -0.991 -67.132 1.00 53.48 O
ATOM 17 N3 U B2037 60.339 -0.310 -65.340 1.00 54.86 N
ATOM 18 C4 U B2037 60.567 0.503 -64.255 1.00 58.98 C
ATOM 19 O4 U B2037 61.570 0.325 -63.577 1.00 56.47 O
ATOM 20 C5 U B2037 59.571 1.507 -64.014 1.00 58.72 C
ATOM 21 C6 U B2037 58.514 1.609 -64.819 1.00 49.93 C
ATOM 22 P A B2038 53.039 -0.072 -67.752 1.00 57.08 P
ATOM 23 OP1 A B2038 52.025 0.908 -68.197 1.00 81.30 O
ATOM 24 OP2 A B2038 52.923 -0.637 -66.405 1.00 73.88 O
ATOM 25 O5' A B2038 53.171 -1.235 -68.811 1.00 60.80 O
TER
ATOM 2 P G A2054 61.494 0.926 -55.758 1.00 51.21 P
ATOM 3 OP1 G A2054 62.836 0.889 -55.162 1.00 55.12 O
ATOM 4 OP2 G A2054 60.932 2.229 -56.177 1.00 59.88 O
ATOM 5 O5' G A2054 61.421 -0.112 -56.957 1.00 41.32 O
ATOM 6 C5' G A2054 61.917 -1.419 -56.792 1.00 39.34 C
ATOM 7 C4' G A2054 61.949 -2.159 -58.093 1.00 45.91 C
ATOM 8 O4' G A2054 60.602 -2.414 -58.548 1.00 49.97 O
ATOM 9 C3' G A2054 62.597 -1.431 -59.247 1.00 47.51 C
ATOM 10 O3' G A2054 64.003 -1.520 -59.223 1.00 47.31 O
ATOM 11 C2' G A2054 61.968 -2.097 -60.459 1.00 48.71 C
ATOM 12 O2' G A2054 62.612 -3.326 -60.750 1.00 40.74 O
ATOM 13 C1' G A2054 60.556 -2.390 -59.947 1.00 45.77 C
ATOM 14 N9 G A2054 59.608 -1.350 -60.331 1.00 49.32 N
ATOM 15 C8 G A2054 59.319 -0.253 -59.586 1.00 48.32 C
ATOM 16 N7 G A2054 58.427 0.492 -60.167 1.00 60.03 N
ATOM 17 C5 G A2054 58.105 -0.157 -61.351 1.00 59.61 C
ATOM 18 C6 G A2054 57.191 0.179 -62.396 1.00 64.22 C
ATOM 19 O6 G A2054 56.441 1.166 -62.490 1.00 69.58 O
ATOM 20 N1 G A2054 57.202 -0.779 -63.407 1.00 57.18 N
ATOM 21 C2 G A2054 57.992 -1.908 -63.405 1.00 55.91 C
ATOM 22 N2 G A2054 57.892 -2.737 -64.448 1.00 55.77 N
ATOM 23 N3 G A2054 58.831 -2.225 -62.443 1.00 59.94 N
ATOM 24 C4 G A2054 58.834 -1.312 -61.454 1.00 57.13 C
ATOM 25 P A A2055 64.873 -0.481 -60.062 1.00 53.93 P
ATOM 26 OP1 A A2055 66.294 -0.666 -59.655 1.00 46.19 O
ATOM 27 OP2 A A2055 64.242 0.858 -59.887 1.00 45.60 O
ATOM 28 O5' A A2055 64.663 -0.984 -61.539 1.00 30.29 O
TER
ATOM 1 O3' C B2036 56.965 6.065 -65.601 1.00 42.87 O
ATOM 2 P U B2037 55.850 5.299 -64.760 1.00 56.56 P
ATOM 3 OP1 U B2037 54.638 6.150 -64.769 1.00 67.74 O
ATOM 4 OP2 U B2037 56.463 4.939 -63.457 1.00 73.07 O
ATOM 5 O5' U B2037 55.602 3.991 -65.625 1.00 43.07 O
ATOM 6 C5' U B2037 55.788 4.007 -67.028 1.00 48.59 C
ATOM 7 C4' U B2037 55.845 2.613 -67.594 1.00 53.48 C
ATOM 8 O4' U B2037 57.200 2.093 -67.455 1.00 57.46 O
ATOM 9 C3' U B2037 54.926 1.598 -66.910 1.00 52.45 C
ATOM 10 O3' U B2037 54.487 0.635 -67.874 1.00 55.76 O
ATOM 11 C2' U B2037 55.876 0.933 -65.921 1.00 52.04 C
ATOM 12 O2' U B2037 55.486 -0.348 -65.473 1.00 57.67 O
ATOM 13 C1' U B2037 57.160 0.879 -66.732 1.00 51.78 C
ATOM 14 N1 U B2037 58.360 0.779 -65.897 1.00 53.06 N
ATOM 15 C2 U B2037 59.258 -0.232 -66.185 1.00 57.24 C
ATOM 16 O2 U B2037 59.115 -0.991 -67.132 1.00 53.48 O
ATOM 17 N3 U B2037 60.339 -0.310 -65.340 1.00 54.86 N
ATOM 18 C4 U B2037 60.567 0.503 -64.255 1.00 58.98 C
ATOM 19 O4 U B2037 61.570 0.325 -63.577 1.00 56.47 O
ATOM 20 C5 U B2037 59.571 1.507 -64.014 1.00 58.72 C
ATOM 21 C6 U B2037 58.514 1.609 -64.819 1.00 49.93 C
ATOM 22 P A B2038 53.039 -0.072 -67.752 1.00 57.08 P
ATOM 23 OP1 A B2038 52.025 0.908 -68.197 1.00 81.30 O
ATOM 24 OP2 A B2038 52.923 -0.637 -66.405 1.00 73.88 O
ATOM 25 O5' A B2038 53.171 -1.235 -68.811 1.00 60.80 O
TER
Atoms:
OP1: (62.836,0.889,-55.162)
OP2: (60.932,2.229,-56.177)
C3': (62.597,-1.431,-59.247)
C1': (60.556,-2.390,-59.947)
C5': (61.917,-1.419,-56.792)
O6: (56.441,1.166,-62.490)
O4': (60.602,-2.414,-58.548)
C8: (59.319,-0.253,-59.586)
C2: (57.992,-1.908,-63.405)
C6: (57.191,0.179,-62.396)
C5: (58.105,-0.157,-61.351)
C4: (58.834,-1.312,-61.454)
P: (61.494,0.926,-55.758)
C4': (61.949,-2.159,-58.093)
C2': (61.968,-2.097,-60.459)
O2': (62.612,-3.326,-60.750)
N1: (57.202,-0.779,-63.407)
N2: (57.892,-2.737,-64.448)
N3: (58.831,-2.225,-62.443)
N7: (58.427,0.492,-60.167)
N9: (59.608,-1.350,-60.331)
O5': (61.421,-0.112,-56.957)
O3': (64.003,-1.520,-59.223)
OP2: (60.932,2.229,-56.177)
C3': (62.597,-1.431,-59.247)
C1': (60.556,-2.390,-59.947)
C5': (61.917,-1.419,-56.792)
O6: (56.441,1.166,-62.490)
O4': (60.602,-2.414,-58.548)
C8: (59.319,-0.253,-59.586)
C2: (57.992,-1.908,-63.405)
C6: (57.191,0.179,-62.396)
C5: (58.105,-0.157,-61.351)
C4: (58.834,-1.312,-61.454)
P: (61.494,0.926,-55.758)
C4': (61.949,-2.159,-58.093)
C2': (61.968,-2.097,-60.459)
O2': (62.612,-3.326,-60.750)
N1: (57.202,-0.779,-63.407)
N2: (57.892,-2.737,-64.448)
N3: (58.831,-2.225,-62.443)
N7: (58.427,0.492,-60.167)
N9: (59.608,-1.350,-60.331)
O5': (61.421,-0.112,-56.957)
O3': (64.003,-1.520,-59.223)
C4: (60.567,0.503,-64.255)
N3: (60.339,-0.310,-65.340)
OP1: (54.638,6.150,-64.769)
OP2: (56.463,4.939,-63.457)
C2: (59.258,-0.232,-66.185)
C1': (57.160,0.879,-66.732)
C3': (54.926,1.598,-66.910)
O5': (55.602,3.991,-65.625)
O4': (57.200,2.093,-67.455)
C5': (55.788,4.007,-67.028)
P: (55.850,5.299,-64.760)
C4': (55.845,2.613,-67.594)
C2': (55.876,0.933,-65.921)
O2': (55.486,-0.348,-65.473)
N1: (58.360,0.779,-65.897)
O4: (61.570,0.325,-63.577)
O2: (59.115,-0.991,-67.132)
C6: (58.514,1.609,-64.819)
C5: (59.571,1.507,-64.014)
O3': (54.487,0.635,-67.874)
N3: (60.339,-0.310,-65.340)
OP1: (54.638,6.150,-64.769)
OP2: (56.463,4.939,-63.457)
C2: (59.258,-0.232,-66.185)
C1': (57.160,0.879,-66.732)
C3': (54.926,1.598,-66.910)
O5': (55.602,3.991,-65.625)
O4': (57.200,2.093,-67.455)
C5': (55.788,4.007,-67.028)
P: (55.850,5.299,-64.760)
C4': (55.845,2.613,-67.594)
C2': (55.876,0.933,-65.921)
O2': (55.486,-0.348,-65.473)
N1: (58.360,0.779,-65.897)
O4: (61.570,0.325,-63.577)
O2: (59.115,-0.991,-67.132)
C6: (58.514,1.609,-64.819)
C5: (59.571,1.507,-64.014)
O3': (54.487,0.635,-67.874)
Image (generated by PyMOL):