Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2054:A2037
Extra
PDB:
ATOM 1 O3' G A2053 60.801 0.490 -54.680 1.00 40.03 O
ATOM 2 P G A2054 61.731 1.262 -55.714 1.00 49.16 P
ATOM 3 OP1 G A2054 63.031 1.466 -55.066 1.00 57.94 O
ATOM 4 OP2 G A2054 60.972 2.449 -56.159 1.00 62.02 O
ATOM 5 O5' G A2054 61.874 0.217 -56.917 1.00 34.99 O
ATOM 6 C5' G A2054 62.323 -1.103 -56.685 1.00 33.63 C
ATOM 7 C4' G A2054 62.336 -1.922 -57.953 1.00 43.25 C
ATOM 8 O4' G A2054 60.981 -2.232 -58.366 1.00 48.83 O
ATOM 9 C3' G A2054 62.952 -1.262 -59.162 1.00 42.36 C
ATOM 10 O3' G A2054 64.353 -1.350 -59.157 1.00 42.59 O
ATOM 11 C2' G A2054 62.290 -1.999 -60.326 1.00 47.70 C
ATOM 12 O2' G A2054 62.918 -3.245 -60.574 1.00 41.18 O
ATOM 13 C1' G A2054 60.895 -2.265 -59.768 1.00 42.90 C
ATOM 14 N9 G A2054 59.941 -1.233 -60.176 1.00 49.40 N
ATOM 15 C8 G A2054 59.647 -0.144 -59.414 1.00 51.99 C
ATOM 16 N7 G A2054 58.774 0.636 -59.977 1.00 58.33 N
ATOM 17 C5 G A2054 58.479 0.015 -61.173 1.00 60.34 C
ATOM 18 C6 G A2054 57.586 0.413 -62.193 1.00 64.87 C
ATOM 19 O6 G A2054 56.878 1.430 -62.209 1.00 65.17 O
ATOM 20 N1 G A2054 57.587 -0.501 -63.249 1.00 56.61 N
ATOM 21 C2 G A2054 58.346 -1.638 -63.289 1.00 47.62 C
ATOM 22 N2 G A2054 58.221 -2.408 -64.362 1.00 49.13 N
ATOM 23 N3 G A2054 59.165 -2.013 -62.341 1.00 52.65 N
ATOM 24 C4 G A2054 59.187 -1.149 -61.315 1.00 53.99 C
ATOM 25 P A A2055 65.228 -0.370 -60.058 1.00 48.64 P
ATOM 26 OP1 A A2055 66.638 -0.509 -59.604 1.00 46.19 O
ATOM 27 OP2 A A2055 64.581 0.966 -60.002 1.00 41.60 O
ATOM 28 O5' A A2055 65.078 -0.997 -61.498 1.00 34.08 O
TER
ATOM 1 O3' C B2036 57.280 6.259 -65.545 1.00 45.96 O
ATOM 2 P U B2037 56.184 5.486 -64.667 1.00 68.40 P
ATOM 3 OP1 U B2037 54.985 6.354 -64.589 1.00 73.72 O
ATOM 4 OP2 U B2037 56.859 5.081 -63.398 1.00 74.15 O
ATOM 5 O5' U B2037 55.869 4.202 -65.557 1.00 39.58 O
ATOM 6 C5' U B2037 56.148 4.209 -66.940 1.00 42.11 C
ATOM 7 C4' U B2037 56.198 2.821 -67.503 1.00 50.22 C
ATOM 8 O4' U B2037 57.530 2.286 -67.331 1.00 50.81 O
ATOM 9 C3' U B2037 55.241 1.814 -66.861 1.00 53.13 C
ATOM 10 O3' U B2037 54.770 0.906 -67.857 1.00 55.07 O
ATOM 11 C2' U B2037 56.148 1.065 -65.907 1.00 54.40 C
ATOM 12 O2' U B2037 55.715 -0.233 -65.586 1.00 57.20 O
ATOM 13 C1' U B2037 57.449 1.038 -66.688 1.00 53.25 C
ATOM 14 N1 U B2037 58.623 0.882 -65.840 1.00 54.88 N
ATOM 15 C2 U B2037 59.487 -0.155 -66.124 1.00 56.03 C
ATOM 16 O2 U B2037 59.308 -0.908 -67.075 1.00 50.00 O
ATOM 17 N3 U B2037 60.556 -0.252 -65.263 1.00 51.39 N
ATOM 18 C4 U B2037 60.796 0.571 -64.175 1.00 58.27 C
ATOM 19 O4 U B2037 61.780 0.398 -63.452 1.00 56.07 O
ATOM 20 C5 U B2037 59.830 1.607 -63.966 1.00 62.19 C
ATOM 21 C6 U B2037 58.789 1.729 -64.783 1.00 51.54 C
ATOM 22 P A B2038 53.249 0.372 -67.836 1.00 63.88 P
ATOM 23 OP1 A B2038 52.403 1.427 -68.438 1.00 84.75 O
ATOM 24 OP2 A B2038 52.948 -0.081 -66.458 1.00 72.84 O
ATOM 25 O5' A B2038 53.323 -0.873 -68.807 1.00 56.91 O
TER
ATOM 2 P G A2054 61.731 1.262 -55.714 1.00 49.16 P
ATOM 3 OP1 G A2054 63.031 1.466 -55.066 1.00 57.94 O
ATOM 4 OP2 G A2054 60.972 2.449 -56.159 1.00 62.02 O
ATOM 5 O5' G A2054 61.874 0.217 -56.917 1.00 34.99 O
ATOM 6 C5' G A2054 62.323 -1.103 -56.685 1.00 33.63 C
ATOM 7 C4' G A2054 62.336 -1.922 -57.953 1.00 43.25 C
ATOM 8 O4' G A2054 60.981 -2.232 -58.366 1.00 48.83 O
ATOM 9 C3' G A2054 62.952 -1.262 -59.162 1.00 42.36 C
ATOM 10 O3' G A2054 64.353 -1.350 -59.157 1.00 42.59 O
ATOM 11 C2' G A2054 62.290 -1.999 -60.326 1.00 47.70 C
ATOM 12 O2' G A2054 62.918 -3.245 -60.574 1.00 41.18 O
ATOM 13 C1' G A2054 60.895 -2.265 -59.768 1.00 42.90 C
ATOM 14 N9 G A2054 59.941 -1.233 -60.176 1.00 49.40 N
ATOM 15 C8 G A2054 59.647 -0.144 -59.414 1.00 51.99 C
ATOM 16 N7 G A2054 58.774 0.636 -59.977 1.00 58.33 N
ATOM 17 C5 G A2054 58.479 0.015 -61.173 1.00 60.34 C
ATOM 18 C6 G A2054 57.586 0.413 -62.193 1.00 64.87 C
ATOM 19 O6 G A2054 56.878 1.430 -62.209 1.00 65.17 O
ATOM 20 N1 G A2054 57.587 -0.501 -63.249 1.00 56.61 N
ATOM 21 C2 G A2054 58.346 -1.638 -63.289 1.00 47.62 C
ATOM 22 N2 G A2054 58.221 -2.408 -64.362 1.00 49.13 N
ATOM 23 N3 G A2054 59.165 -2.013 -62.341 1.00 52.65 N
ATOM 24 C4 G A2054 59.187 -1.149 -61.315 1.00 53.99 C
ATOM 25 P A A2055 65.228 -0.370 -60.058 1.00 48.64 P
ATOM 26 OP1 A A2055 66.638 -0.509 -59.604 1.00 46.19 O
ATOM 27 OP2 A A2055 64.581 0.966 -60.002 1.00 41.60 O
ATOM 28 O5' A A2055 65.078 -0.997 -61.498 1.00 34.08 O
TER
ATOM 1 O3' C B2036 57.280 6.259 -65.545 1.00 45.96 O
ATOM 2 P U B2037 56.184 5.486 -64.667 1.00 68.40 P
ATOM 3 OP1 U B2037 54.985 6.354 -64.589 1.00 73.72 O
ATOM 4 OP2 U B2037 56.859 5.081 -63.398 1.00 74.15 O
ATOM 5 O5' U B2037 55.869 4.202 -65.557 1.00 39.58 O
ATOM 6 C5' U B2037 56.148 4.209 -66.940 1.00 42.11 C
ATOM 7 C4' U B2037 56.198 2.821 -67.503 1.00 50.22 C
ATOM 8 O4' U B2037 57.530 2.286 -67.331 1.00 50.81 O
ATOM 9 C3' U B2037 55.241 1.814 -66.861 1.00 53.13 C
ATOM 10 O3' U B2037 54.770 0.906 -67.857 1.00 55.07 O
ATOM 11 C2' U B2037 56.148 1.065 -65.907 1.00 54.40 C
ATOM 12 O2' U B2037 55.715 -0.233 -65.586 1.00 57.20 O
ATOM 13 C1' U B2037 57.449 1.038 -66.688 1.00 53.25 C
ATOM 14 N1 U B2037 58.623 0.882 -65.840 1.00 54.88 N
ATOM 15 C2 U B2037 59.487 -0.155 -66.124 1.00 56.03 C
ATOM 16 O2 U B2037 59.308 -0.908 -67.075 1.00 50.00 O
ATOM 17 N3 U B2037 60.556 -0.252 -65.263 1.00 51.39 N
ATOM 18 C4 U B2037 60.796 0.571 -64.175 1.00 58.27 C
ATOM 19 O4 U B2037 61.780 0.398 -63.452 1.00 56.07 O
ATOM 20 C5 U B2037 59.830 1.607 -63.966 1.00 62.19 C
ATOM 21 C6 U B2037 58.789 1.729 -64.783 1.00 51.54 C
ATOM 22 P A B2038 53.249 0.372 -67.836 1.00 63.88 P
ATOM 23 OP1 A B2038 52.403 1.427 -68.438 1.00 84.75 O
ATOM 24 OP2 A B2038 52.948 -0.081 -66.458 1.00 72.84 O
ATOM 25 O5' A B2038 53.323 -0.873 -68.807 1.00 56.91 O
TER
Atoms:
OP1: (63.031,1.466,-55.066)
OP2: (60.972,2.449,-56.159)
C3': (62.952,-1.262,-59.162)
C1': (60.895,-2.265,-59.768)
C5': (62.323,-1.103,-56.685)
O6: (56.878,1.430,-62.209)
O4': (60.981,-2.232,-58.366)
C8: (59.647,-0.144,-59.414)
C2: (58.346,-1.638,-63.289)
C6: (57.586,0.413,-62.193)
C5: (58.479,0.015,-61.173)
C4: (59.187,-1.149,-61.315)
P: (61.731,1.262,-55.714)
C4': (62.336,-1.922,-57.953)
C2': (62.290,-1.999,-60.326)
O2': (62.918,-3.245,-60.574)
N1: (57.587,-0.501,-63.249)
N2: (58.221,-2.408,-64.362)
N3: (59.165,-2.013,-62.341)
N7: (58.774,0.636,-59.977)
N9: (59.941,-1.233,-60.176)
O5': (61.874,0.217,-56.917)
O3': (64.353,-1.350,-59.157)
OP2: (60.972,2.449,-56.159)
C3': (62.952,-1.262,-59.162)
C1': (60.895,-2.265,-59.768)
C5': (62.323,-1.103,-56.685)
O6: (56.878,1.430,-62.209)
O4': (60.981,-2.232,-58.366)
C8: (59.647,-0.144,-59.414)
C2: (58.346,-1.638,-63.289)
C6: (57.586,0.413,-62.193)
C5: (58.479,0.015,-61.173)
C4: (59.187,-1.149,-61.315)
P: (61.731,1.262,-55.714)
C4': (62.336,-1.922,-57.953)
C2': (62.290,-1.999,-60.326)
O2': (62.918,-3.245,-60.574)
N1: (57.587,-0.501,-63.249)
N2: (58.221,-2.408,-64.362)
N3: (59.165,-2.013,-62.341)
N7: (58.774,0.636,-59.977)
N9: (59.941,-1.233,-60.176)
O5': (61.874,0.217,-56.917)
O3': (64.353,-1.350,-59.157)
C4: (60.796,0.571,-64.175)
N3: (60.556,-0.252,-65.263)
OP1: (54.985,6.354,-64.589)
OP2: (56.859,5.081,-63.398)
C2: (59.487,-0.155,-66.124)
C1': (57.449,1.038,-66.688)
C3': (55.241,1.814,-66.861)
O5': (55.869,4.202,-65.557)
O4': (57.530,2.286,-67.331)
C5': (56.148,4.209,-66.940)
P: (56.184,5.486,-64.667)
C4': (56.198,2.821,-67.503)
C2': (56.148,1.065,-65.907)
O2': (55.715,-0.233,-65.586)
N1: (58.623,0.882,-65.840)
O4: (61.780,0.398,-63.452)
O2: (59.308,-0.908,-67.075)
C6: (58.789,1.729,-64.783)
C5: (59.830,1.607,-63.966)
O3': (54.770,0.906,-67.857)
N3: (60.556,-0.252,-65.263)
OP1: (54.985,6.354,-64.589)
OP2: (56.859,5.081,-63.398)
C2: (59.487,-0.155,-66.124)
C1': (57.449,1.038,-66.688)
C3': (55.241,1.814,-66.861)
O5': (55.869,4.202,-65.557)
O4': (57.530,2.286,-67.331)
C5': (56.148,4.209,-66.940)
P: (56.184,5.486,-64.667)
C4': (56.198,2.821,-67.503)
C2': (56.148,1.065,-65.907)
O2': (55.715,-0.233,-65.586)
N1: (58.623,0.882,-65.840)
O4: (61.780,0.398,-63.452)
O2: (59.308,-0.908,-67.075)
C6: (58.789,1.729,-64.783)
C5: (59.830,1.607,-63.966)
O3': (54.770,0.906,-67.857)
Image (generated by PyMOL):