Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2217:A2190
Extra
PDB:
ATOM 1 O3' G A2216 -61.020 -0.158 55.936 1.00 1.76 O
ATOM 2 P G A2217 -62.132 0.586 56.777 1.00 0.60 P
ATOM 3 OP1 G A2217 -63.262 0.842 55.887 1.00 0.60 O
ATOM 4 OP2 G A2217 -61.473 1.716 57.433 1.00 0.60 O
ATOM 5 O5' G A2217 -62.524 -0.510 57.863 1.00 0.60 O
ATOM 6 C5' G A2217 -62.437 -1.895 57.548 1.00 0.60 C
ATOM 7 C4' G A2217 -62.574 -2.766 58.769 1.00 0.60 C
ATOM 8 O4' G A2217 -61.299 -2.876 59.442 1.00 0.60 O
ATOM 9 C3' G A2217 -63.518 -2.282 59.854 1.00 0.60 C
ATOM 10 O3' G A2217 -64.888 -2.530 59.562 1.00 0.60 O
ATOM 11 C2' G A2217 -63.012 -3.041 61.070 1.00 0.60 C
ATOM 12 O2' G A2217 -63.508 -4.368 61.073 1.00 0.60 O
ATOM 13 C1' G A2217 -61.507 -3.100 60.812 1.00 0.60 C
ATOM 14 N9 G A2217 -60.762 -2.085 61.561 1.00 0.93 N
ATOM 15 C8 G A2217 -60.426 -0.878 61.045 1.00 0.93 C
ATOM 16 N7 G A2217 -59.726 -0.133 61.853 1.00 0.93 N
ATOM 17 C5 G A2217 -59.601 -0.917 62.972 1.00 0.93 C
ATOM 18 C6 G A2217 -58.930 -0.617 64.179 1.00 0.93 C
ATOM 19 O6 G A2217 -58.316 0.429 64.489 1.00 0.93 O
ATOM 20 N1 G A2217 -59.014 -1.693 65.054 1.00 0.93 N
ATOM 21 C2 G A2217 -59.655 -2.852 64.806 1.00 0.93 C
ATOM 22 N2 G A2217 -59.600 -3.712 65.810 1.00 0.93 N
ATOM 23 N3 G A2217 -60.286 -3.121 63.693 1.00 0.93 N
ATOM 24 C4 G A2217 -60.220 -2.122 62.811 1.00 0.93 C
ATOM 25 P A A2218 -66.033 -1.623 60.240 1.00 7.10 P
ATOM 26 OP1 A A2218 -67.247 -1.728 59.397 1.00 7.10 O
ATOM 27 OP2 A A2218 -65.453 -0.302 60.479 1.00 7.10 O
ATOM 28 O5' A A2218 -66.285 -2.322 61.626 1.00 7.10 O
TER
ATOM 1 O3' C B2189 -60.237 5.040 67.723 1.00 11.46 O
ATOM 2 P U B2190 -58.816 4.462 67.225 1.00 2.97 P
ATOM 3 OP1 U B2190 -57.756 5.339 67.801 1.00 2.97 O
ATOM 4 OP2 U B2190 -58.890 4.304 65.731 1.00 2.97 O
ATOM 5 O5' U B2190 -58.779 3.046 67.934 1.00 2.97 O
ATOM 6 C5' U B2190 -59.413 2.884 69.184 1.00 2.97 C
ATOM 7 C4' U B2190 -59.403 1.459 69.636 1.00 2.97 C
ATOM 8 O4' U B2190 -60.541 0.768 69.056 1.00 2.97 O
ATOM 9 C3' U B2190 -58.184 0.670 69.212 1.00 2.97 C
ATOM 10 O3' U B2190 -57.995 -0.405 70.131 1.00 2.97 O
ATOM 11 C2' U B2190 -58.643 0.116 67.881 1.00 2.97 C
ATOM 12 O2' U B2190 -57.877 -0.972 67.396 1.00 2.97 O
ATOM 13 C1' U B2190 -60.074 -0.279 68.244 1.00 2.97 C
ATOM 14 N1 U B2190 -60.987 -0.405 67.107 1.00 2.68 N
ATOM 15 C2 U B2190 -61.658 -1.596 67.065 1.00 2.68 C
ATOM 16 O2 U B2190 -61.475 -2.456 67.901 1.00 2.68 O
ATOM 17 N3 U B2190 -62.527 -1.718 66.033 1.00 2.68 N
ATOM 18 C4 U B2190 -62.761 -0.801 65.058 1.00 2.68 C
ATOM 19 O4 U B2190 -63.569 -1.080 64.177 1.00 2.68 O
ATOM 20 C5 U B2190 -62.012 0.419 65.170 1.00 2.68 C
ATOM 21 C6 U B2190 -61.174 0.594 66.186 1.00 2.68 C
ATOM 22 P A B2191 -56.520 -0.964 70.433 1.00 15.31 P
ATOM 23 OP1 A B2191 -55.759 0.154 71.056 1.00 15.31 O
ATOM 24 OP2 A B2191 -56.002 -1.576 69.176 1.00 15.31 O
ATOM 25 O5' A B2191 -56.793 -2.109 71.502 1.00 15.31 O
TER
ATOM 2 P G A2217 -62.132 0.586 56.777 1.00 0.60 P
ATOM 3 OP1 G A2217 -63.262 0.842 55.887 1.00 0.60 O
ATOM 4 OP2 G A2217 -61.473 1.716 57.433 1.00 0.60 O
ATOM 5 O5' G A2217 -62.524 -0.510 57.863 1.00 0.60 O
ATOM 6 C5' G A2217 -62.437 -1.895 57.548 1.00 0.60 C
ATOM 7 C4' G A2217 -62.574 -2.766 58.769 1.00 0.60 C
ATOM 8 O4' G A2217 -61.299 -2.876 59.442 1.00 0.60 O
ATOM 9 C3' G A2217 -63.518 -2.282 59.854 1.00 0.60 C
ATOM 10 O3' G A2217 -64.888 -2.530 59.562 1.00 0.60 O
ATOM 11 C2' G A2217 -63.012 -3.041 61.070 1.00 0.60 C
ATOM 12 O2' G A2217 -63.508 -4.368 61.073 1.00 0.60 O
ATOM 13 C1' G A2217 -61.507 -3.100 60.812 1.00 0.60 C
ATOM 14 N9 G A2217 -60.762 -2.085 61.561 1.00 0.93 N
ATOM 15 C8 G A2217 -60.426 -0.878 61.045 1.00 0.93 C
ATOM 16 N7 G A2217 -59.726 -0.133 61.853 1.00 0.93 N
ATOM 17 C5 G A2217 -59.601 -0.917 62.972 1.00 0.93 C
ATOM 18 C6 G A2217 -58.930 -0.617 64.179 1.00 0.93 C
ATOM 19 O6 G A2217 -58.316 0.429 64.489 1.00 0.93 O
ATOM 20 N1 G A2217 -59.014 -1.693 65.054 1.00 0.93 N
ATOM 21 C2 G A2217 -59.655 -2.852 64.806 1.00 0.93 C
ATOM 22 N2 G A2217 -59.600 -3.712 65.810 1.00 0.93 N
ATOM 23 N3 G A2217 -60.286 -3.121 63.693 1.00 0.93 N
ATOM 24 C4 G A2217 -60.220 -2.122 62.811 1.00 0.93 C
ATOM 25 P A A2218 -66.033 -1.623 60.240 1.00 7.10 P
ATOM 26 OP1 A A2218 -67.247 -1.728 59.397 1.00 7.10 O
ATOM 27 OP2 A A2218 -65.453 -0.302 60.479 1.00 7.10 O
ATOM 28 O5' A A2218 -66.285 -2.322 61.626 1.00 7.10 O
TER
ATOM 1 O3' C B2189 -60.237 5.040 67.723 1.00 11.46 O
ATOM 2 P U B2190 -58.816 4.462 67.225 1.00 2.97 P
ATOM 3 OP1 U B2190 -57.756 5.339 67.801 1.00 2.97 O
ATOM 4 OP2 U B2190 -58.890 4.304 65.731 1.00 2.97 O
ATOM 5 O5' U B2190 -58.779 3.046 67.934 1.00 2.97 O
ATOM 6 C5' U B2190 -59.413 2.884 69.184 1.00 2.97 C
ATOM 7 C4' U B2190 -59.403 1.459 69.636 1.00 2.97 C
ATOM 8 O4' U B2190 -60.541 0.768 69.056 1.00 2.97 O
ATOM 9 C3' U B2190 -58.184 0.670 69.212 1.00 2.97 C
ATOM 10 O3' U B2190 -57.995 -0.405 70.131 1.00 2.97 O
ATOM 11 C2' U B2190 -58.643 0.116 67.881 1.00 2.97 C
ATOM 12 O2' U B2190 -57.877 -0.972 67.396 1.00 2.97 O
ATOM 13 C1' U B2190 -60.074 -0.279 68.244 1.00 2.97 C
ATOM 14 N1 U B2190 -60.987 -0.405 67.107 1.00 2.68 N
ATOM 15 C2 U B2190 -61.658 -1.596 67.065 1.00 2.68 C
ATOM 16 O2 U B2190 -61.475 -2.456 67.901 1.00 2.68 O
ATOM 17 N3 U B2190 -62.527 -1.718 66.033 1.00 2.68 N
ATOM 18 C4 U B2190 -62.761 -0.801 65.058 1.00 2.68 C
ATOM 19 O4 U B2190 -63.569 -1.080 64.177 1.00 2.68 O
ATOM 20 C5 U B2190 -62.012 0.419 65.170 1.00 2.68 C
ATOM 21 C6 U B2190 -61.174 0.594 66.186 1.00 2.68 C
ATOM 22 P A B2191 -56.520 -0.964 70.433 1.00 15.31 P
ATOM 23 OP1 A B2191 -55.759 0.154 71.056 1.00 15.31 O
ATOM 24 OP2 A B2191 -56.002 -1.576 69.176 1.00 15.31 O
ATOM 25 O5' A B2191 -56.793 -2.109 71.502 1.00 15.31 O
TER
Atoms:
OP1: (-63.262,0.842,55.887)
OP2: (-61.473,1.716,57.433)
C3': (-63.518,-2.282,59.854)
C1': (-61.507,-3.100,60.812)
C5': (-62.437,-1.895,57.548)
O6: (-58.316,0.429,64.489)
O4': (-61.299,-2.876,59.442)
C8: (-60.426,-0.878,61.045)
C2: (-59.655,-2.852,64.806)
C6: (-58.930,-0.617,64.179)
C5: (-59.601,-0.917,62.972)
C4: (-60.220,-2.122,62.811)
P: (-62.132,0.586,56.777)
C4': (-62.574,-2.766,58.769)
C2': (-63.012,-3.041,61.070)
O2': (-63.508,-4.368,61.073)
N1: (-59.014,-1.693,65.054)
N2: (-59.600,-3.712,65.810)
N3: (-60.286,-3.121,63.693)
N7: (-59.726,-0.133,61.853)
N9: (-60.762,-2.085,61.561)
O5': (-62.524,-0.510,57.863)
O3': (-64.888,-2.530,59.562)
OP2: (-61.473,1.716,57.433)
C3': (-63.518,-2.282,59.854)
C1': (-61.507,-3.100,60.812)
C5': (-62.437,-1.895,57.548)
O6: (-58.316,0.429,64.489)
O4': (-61.299,-2.876,59.442)
C8: (-60.426,-0.878,61.045)
C2: (-59.655,-2.852,64.806)
C6: (-58.930,-0.617,64.179)
C5: (-59.601,-0.917,62.972)
C4: (-60.220,-2.122,62.811)
P: (-62.132,0.586,56.777)
C4': (-62.574,-2.766,58.769)
C2': (-63.012,-3.041,61.070)
O2': (-63.508,-4.368,61.073)
N1: (-59.014,-1.693,65.054)
N2: (-59.600,-3.712,65.810)
N3: (-60.286,-3.121,63.693)
N7: (-59.726,-0.133,61.853)
N9: (-60.762,-2.085,61.561)
O5': (-62.524,-0.510,57.863)
O3': (-64.888,-2.530,59.562)
C4: (-62.761,-0.801,65.058)
N3: (-62.527,-1.718,66.033)
OP1: (-57.756,5.339,67.801)
OP2: (-58.890,4.304,65.731)
C2: (-61.658,-1.596,67.065)
C1': (-60.074,-0.279,68.244)
C3': (-58.184,0.670,69.212)
O5': (-58.779,3.046,67.934)
O4': (-60.541,0.768,69.056)
C5': (-59.413,2.884,69.184)
P: (-58.816,4.462,67.225)
C4': (-59.403,1.459,69.636)
C2': (-58.643,0.116,67.881)
O2': (-57.877,-0.972,67.396)
N1: (-60.987,-0.405,67.107)
O4: (-63.569,-1.080,64.177)
O2: (-61.475,-2.456,67.901)
C6: (-61.174,0.594,66.186)
C5: (-62.012,0.419,65.170)
O3': (-57.995,-0.405,70.131)
N3: (-62.527,-1.718,66.033)
OP1: (-57.756,5.339,67.801)
OP2: (-58.890,4.304,65.731)
C2: (-61.658,-1.596,67.065)
C1': (-60.074,-0.279,68.244)
C3': (-58.184,0.670,69.212)
O5': (-58.779,3.046,67.934)
O4': (-60.541,0.768,69.056)
C5': (-59.413,2.884,69.184)
P: (-58.816,4.462,67.225)
C4': (-59.403,1.459,69.636)
C2': (-58.643,0.116,67.881)
O2': (-57.877,-0.972,67.396)
N1: (-60.987,-0.405,67.107)
O4: (-63.569,-1.080,64.177)
O2: (-61.475,-2.456,67.901)
C6: (-61.174,0.594,66.186)
C5: (-62.012,0.419,65.170)
O3': (-57.995,-0.405,70.131)
Image (generated by PyMOL):