Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2216:A2189
Extra
PDB:
ATOM 1 O3' G A2215 -7.797 169.175 107.681 1.00 29.06 O
ATOM 2 P G A2216 -8.667 170.294 106.937 1.00 27.88 P
ATOM 3 OP1 G A2216 -9.615 169.613 106.030 1.00 27.88 O
ATOM 4 OP2 G A2216 -7.715 171.268 106.360 1.00 27.88 O
ATOM 5 O5' G A2216 -9.461 170.949 108.145 1.00 27.88 O
ATOM 6 C5' G A2216 -8.868 171.036 109.429 1.00 27.88 C
ATOM 7 C4' G A2216 -9.373 172.233 110.176 1.00 27.88 C
ATOM 8 O4' G A2216 -8.298 172.791 110.980 1.00 27.88 O
ATOM 9 C3' G A2216 -9.868 173.374 109.294 1.00 27.88 C
ATOM 10 O3' G A2216 -11.250 173.272 109.007 1.00 27.88 O
ATOM 11 C2' G A2216 -9.485 174.622 110.071 1.00 27.88 C
ATOM 12 O2' G A2216 -10.470 174.945 111.041 1.00 27.88 O
ATOM 13 C1' G A2216 -8.204 174.165 110.776 1.00 27.88 C
ATOM 14 N9 G A2216 -7.024 174.379 109.942 1.00 28.54 N
ATOM 15 C8 G A2216 -6.557 173.478 109.027 1.00 28.54 C
ATOM 16 N7 G A2216 -5.492 173.883 108.401 1.00 28.54 N
ATOM 17 C5 G A2216 -5.236 175.128 108.958 1.00 28.54 C
ATOM 18 C6 G A2216 -4.201 176.067 108.691 1.00 28.54 C
ATOM 19 O6 G A2216 -3.260 176.001 107.880 1.00 28.54 O
ATOM 20 N1 G A2216 -4.345 177.191 109.494 1.00 28.54 N
ATOM 21 C2 G A2216 -5.340 177.378 110.421 1.00 28.54 C
ATOM 22 N2 G A2216 -5.323 178.516 111.112 1.00 28.54 N
ATOM 23 N3 G A2216 -6.296 176.521 110.671 1.00 28.54 N
ATOM 24 C4 G A2216 -6.179 175.432 109.912 1.00 28.54 C
ATOM 25 P A A2217 -11.923 174.252 107.941 1.00 19.66 P
ATOM 26 OP1 A A2217 -13.283 173.741 107.652 1.00 19.66 O
ATOM 27 OP2 A A2217 -10.974 174.404 106.828 1.00 19.66 O
ATOM 28 O5' A A2217 -12.035 175.601 108.741 1.00 19.66 O
TER
ATOM 1 O3' C B2188 -3.529 180.121 102.933 1.00 29.92 O
ATOM 2 P U B2189 -2.534 179.354 103.919 1.00 37.10 P
ATOM 3 OP1 U B2189 -1.213 179.241 103.249 1.00 37.10 O
ATOM 4 OP2 U B2189 -3.219 178.114 104.341 1.00 37.10 O
ATOM 5 O5' U B2189 -2.430 180.357 105.141 1.00 37.10 O
ATOM 6 C5' U B2189 -3.201 181.553 105.182 1.00 37.10 C
ATOM 7 C4' U B2189 -3.306 182.076 106.588 1.00 37.10 C
ATOM 8 O4' U B2189 -4.617 181.744 107.110 1.00 37.10 O
ATOM 9 C3' U B2189 -2.322 181.447 107.559 1.00 37.10 C
ATOM 10 O3' U B2189 -2.162 182.304 108.682 1.00 37.10 O
ATOM 11 C2' U B2189 -3.078 180.207 107.982 1.00 37.10 C
ATOM 12 O2' U B2189 -2.592 179.587 109.150 1.00 37.10 O
ATOM 13 C1' U B2189 -4.476 180.802 108.163 1.00 37.10 C
ATOM 14 N1 U B2189 -5.574 179.828 108.052 1.00 37.45 N
ATOM 15 C2 U B2189 -6.827 180.214 108.534 1.00 37.45 C
ATOM 16 O2 U B2189 -7.056 181.305 109.038 1.00 37.45 O
ATOM 17 N3 U B2189 -7.809 179.260 108.405 1.00 37.45 N
ATOM 18 C4 U B2189 -7.650 178.000 107.851 1.00 37.45 C
ATOM 19 O4 U B2189 -8.605 177.231 107.784 1.00 37.45 O
ATOM 20 C5 U B2189 -6.334 177.690 107.377 1.00 37.45 C
ATOM 21 C6 U B2189 -5.361 178.596 107.487 1.00 37.45 C
ATOM 22 P A B2190 -0.729 182.447 109.398 1.00 15.65 P
ATOM 23 OP1 A B2190 0.050 183.409 108.595 1.00 15.65 O
ATOM 24 OP2 A B2190 -0.172 181.057 109.605 1.00 15.65 O
ATOM 25 O5' A B2190 -1.121 183.095 110.799 1.00 15.65 O
TER
ATOM 2 P G A2216 -8.667 170.294 106.937 1.00 27.88 P
ATOM 3 OP1 G A2216 -9.615 169.613 106.030 1.00 27.88 O
ATOM 4 OP2 G A2216 -7.715 171.268 106.360 1.00 27.88 O
ATOM 5 O5' G A2216 -9.461 170.949 108.145 1.00 27.88 O
ATOM 6 C5' G A2216 -8.868 171.036 109.429 1.00 27.88 C
ATOM 7 C4' G A2216 -9.373 172.233 110.176 1.00 27.88 C
ATOM 8 O4' G A2216 -8.298 172.791 110.980 1.00 27.88 O
ATOM 9 C3' G A2216 -9.868 173.374 109.294 1.00 27.88 C
ATOM 10 O3' G A2216 -11.250 173.272 109.007 1.00 27.88 O
ATOM 11 C2' G A2216 -9.485 174.622 110.071 1.00 27.88 C
ATOM 12 O2' G A2216 -10.470 174.945 111.041 1.00 27.88 O
ATOM 13 C1' G A2216 -8.204 174.165 110.776 1.00 27.88 C
ATOM 14 N9 G A2216 -7.024 174.379 109.942 1.00 28.54 N
ATOM 15 C8 G A2216 -6.557 173.478 109.027 1.00 28.54 C
ATOM 16 N7 G A2216 -5.492 173.883 108.401 1.00 28.54 N
ATOM 17 C5 G A2216 -5.236 175.128 108.958 1.00 28.54 C
ATOM 18 C6 G A2216 -4.201 176.067 108.691 1.00 28.54 C
ATOM 19 O6 G A2216 -3.260 176.001 107.880 1.00 28.54 O
ATOM 20 N1 G A2216 -4.345 177.191 109.494 1.00 28.54 N
ATOM 21 C2 G A2216 -5.340 177.378 110.421 1.00 28.54 C
ATOM 22 N2 G A2216 -5.323 178.516 111.112 1.00 28.54 N
ATOM 23 N3 G A2216 -6.296 176.521 110.671 1.00 28.54 N
ATOM 24 C4 G A2216 -6.179 175.432 109.912 1.00 28.54 C
ATOM 25 P A A2217 -11.923 174.252 107.941 1.00 19.66 P
ATOM 26 OP1 A A2217 -13.283 173.741 107.652 1.00 19.66 O
ATOM 27 OP2 A A2217 -10.974 174.404 106.828 1.00 19.66 O
ATOM 28 O5' A A2217 -12.035 175.601 108.741 1.00 19.66 O
TER
ATOM 1 O3' C B2188 -3.529 180.121 102.933 1.00 29.92 O
ATOM 2 P U B2189 -2.534 179.354 103.919 1.00 37.10 P
ATOM 3 OP1 U B2189 -1.213 179.241 103.249 1.00 37.10 O
ATOM 4 OP2 U B2189 -3.219 178.114 104.341 1.00 37.10 O
ATOM 5 O5' U B2189 -2.430 180.357 105.141 1.00 37.10 O
ATOM 6 C5' U B2189 -3.201 181.553 105.182 1.00 37.10 C
ATOM 7 C4' U B2189 -3.306 182.076 106.588 1.00 37.10 C
ATOM 8 O4' U B2189 -4.617 181.744 107.110 1.00 37.10 O
ATOM 9 C3' U B2189 -2.322 181.447 107.559 1.00 37.10 C
ATOM 10 O3' U B2189 -2.162 182.304 108.682 1.00 37.10 O
ATOM 11 C2' U B2189 -3.078 180.207 107.982 1.00 37.10 C
ATOM 12 O2' U B2189 -2.592 179.587 109.150 1.00 37.10 O
ATOM 13 C1' U B2189 -4.476 180.802 108.163 1.00 37.10 C
ATOM 14 N1 U B2189 -5.574 179.828 108.052 1.00 37.45 N
ATOM 15 C2 U B2189 -6.827 180.214 108.534 1.00 37.45 C
ATOM 16 O2 U B2189 -7.056 181.305 109.038 1.00 37.45 O
ATOM 17 N3 U B2189 -7.809 179.260 108.405 1.00 37.45 N
ATOM 18 C4 U B2189 -7.650 178.000 107.851 1.00 37.45 C
ATOM 19 O4 U B2189 -8.605 177.231 107.784 1.00 37.45 O
ATOM 20 C5 U B2189 -6.334 177.690 107.377 1.00 37.45 C
ATOM 21 C6 U B2189 -5.361 178.596 107.487 1.00 37.45 C
ATOM 22 P A B2190 -0.729 182.447 109.398 1.00 15.65 P
ATOM 23 OP1 A B2190 0.050 183.409 108.595 1.00 15.65 O
ATOM 24 OP2 A B2190 -0.172 181.057 109.605 1.00 15.65 O
ATOM 25 O5' A B2190 -1.121 183.095 110.799 1.00 15.65 O
TER
Atoms:
OP1: (-9.615,169.613,106.030)
OP2: (-7.715,171.268,106.360)
C3': (-9.868,173.374,109.294)
C1': (-8.204,174.165,110.776)
C5': (-8.868,171.036,109.429)
O6: (-3.260,176.001,107.880)
O4': (-8.298,172.791,110.980)
C8: (-6.557,173.478,109.027)
C2: (-5.340,177.378,110.421)
C6: (-4.201,176.067,108.691)
C5: (-5.236,175.128,108.958)
C4: (-6.179,175.432,109.912)
P: (-8.667,170.294,106.937)
C4': (-9.373,172.233,110.176)
C2': (-9.485,174.622,110.071)
O2': (-10.470,174.945,111.041)
N1: (-4.345,177.191,109.494)
N2: (-5.323,178.516,111.112)
N3: (-6.296,176.521,110.671)
N7: (-5.492,173.883,108.401)
N9: (-7.024,174.379,109.942)
O5': (-9.461,170.949,108.145)
O3': (-11.250,173.272,109.007)
OP2: (-7.715,171.268,106.360)
C3': (-9.868,173.374,109.294)
C1': (-8.204,174.165,110.776)
C5': (-8.868,171.036,109.429)
O6: (-3.260,176.001,107.880)
O4': (-8.298,172.791,110.980)
C8: (-6.557,173.478,109.027)
C2: (-5.340,177.378,110.421)
C6: (-4.201,176.067,108.691)
C5: (-5.236,175.128,108.958)
C4: (-6.179,175.432,109.912)
P: (-8.667,170.294,106.937)
C4': (-9.373,172.233,110.176)
C2': (-9.485,174.622,110.071)
O2': (-10.470,174.945,111.041)
N1: (-4.345,177.191,109.494)
N2: (-5.323,178.516,111.112)
N3: (-6.296,176.521,110.671)
N7: (-5.492,173.883,108.401)
N9: (-7.024,174.379,109.942)
O5': (-9.461,170.949,108.145)
O3': (-11.250,173.272,109.007)
C4: (-7.650,178.000,107.851)
N3: (-7.809,179.260,108.405)
OP1: (-1.213,179.241,103.249)
OP2: (-3.219,178.114,104.341)
C2: (-6.827,180.214,108.534)
C1': (-4.476,180.802,108.163)
C3': (-2.322,181.447,107.559)
O5': (-2.430,180.357,105.141)
O4': (-4.617,181.744,107.110)
C5': (-3.201,181.553,105.182)
P: (-2.534,179.354,103.919)
C4': (-3.306,182.076,106.588)
C2': (-3.078,180.207,107.982)
O2': (-2.592,179.587,109.150)
N1: (-5.574,179.828,108.052)
O4: (-8.605,177.231,107.784)
O2: (-7.056,181.305,109.038)
C6: (-5.361,178.596,107.487)
C5: (-6.334,177.690,107.377)
O3': (-2.162,182.304,108.682)
N3: (-7.809,179.260,108.405)
OP1: (-1.213,179.241,103.249)
OP2: (-3.219,178.114,104.341)
C2: (-6.827,180.214,108.534)
C1': (-4.476,180.802,108.163)
C3': (-2.322,181.447,107.559)
O5': (-2.430,180.357,105.141)
O4': (-4.617,181.744,107.110)
C5': (-3.201,181.553,105.182)
P: (-2.534,179.354,103.919)
C4': (-3.306,182.076,106.588)
C2': (-3.078,180.207,107.982)
O2': (-2.592,179.587,109.150)
N1: (-5.574,179.828,108.052)
O4: (-8.605,177.231,107.784)
O2: (-7.056,181.305,109.038)
C6: (-5.361,178.596,107.487)
C5: (-6.334,177.690,107.377)
O3': (-2.162,182.304,108.682)
Image (generated by PyMOL):