ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1N8R:A250:A235

Extra

PDB:
ATOM 1 O3' A A 249 95.280 123.623 3.868 1.00 38.83 O
ATOM 2 P A A 250 96.860 123.577 4.168 1.00 39.65 P
ATOM 3 OP1 A A 250 97.079 123.587 5.635 1.00 38.89 O
ATOM 4 OP2 A A 250 97.531 124.596 3.343 1.00 40.18 O
ATOM 5 O5' A A 250 97.267 122.137 3.613 1.00 40.15 O
ATOM 6 C5' A A 250 96.966 121.756 2.252 1.00 38.56 C
ATOM 7 C4' A A 250 97.775 120.539 1.863 1.00 39.68 C
ATOM 8 O4' A A 250 97.384 120.100 0.533 1.00 39.84 O
ATOM 9 C3' A A 250 99.281 120.747 1.783 1.00 40.69 C
ATOM 10 O3' A A 250 99.907 119.484 2.018 1.00 40.57 O
ATOM 11 C2' A A 250 99.454 121.156 0.322 1.00 40.57 C
ATOM 12 O2' A A 250 100.763 120.990 -0.170 1.00 42.49 O
ATOM 13 C1' A A 250 98.497 120.174 -0.345 1.00 40.95 C
ATOM 14 N9 A A 250 98.005 120.532 -1.675 1.00 42.23 N
ATOM 15 C8 A A 250 98.086 119.776 -2.820 1.00 42.83 C
ATOM 16 N7 A A 250 97.493 120.318 -3.857 1.00 42.49 N
ATOM 17 C5 A A 250 97.002 121.521 -3.366 1.00 42.33 C
ATOM 18 C6 A A 250 96.271 122.568 -3.967 1.00 42.25 C
ATOM 19 N6 A A 250 95.903 122.579 -5.245 1.00 40.68 N
ATOM 20 N1 A A 250 95.934 123.619 -3.191 1.00 43.56 N
ATOM 21 C2 A A 250 96.325 123.619 -1.901 1.00 44.51 C
ATOM 22 N3 A A 250 97.021 122.702 -1.227 1.00 43.41 N
ATOM 23 C4 A A 250 97.326 121.669 -2.026 1.00 42.35 C
ATOM 24 P U A 251 100.989 119.326 3.194 1.00 41.01 P
ATOM 25 OP1 U A 251 101.742 120.613 3.306 1.00 39.30 O
ATOM 26 OP2 U A 251 101.728 118.043 3.004 1.00 39.66 O
ATOM 27 O5' U A 251 100.118 119.210 4.519 1.00 41.00 O
TER

ATOM 1 O3' G B 234 93.918 118.124 -7.714 1.00 50.72 O
ATOM 2 P A B 235 94.479 119.149 -8.813 1.00 51.14 P
ATOM 3 OP1 A B 235 94.031 118.627 -10.131 1.00 51.42 O
ATOM 4 OP2 A B 235 95.930 119.368 -8.562 1.00 49.07 O
ATOM 5 O5' A B 235 93.704 120.503 -8.506 1.00 50.40 O
ATOM 6 C5' A B 235 92.324 120.654 -8.865 1.00 49.86 C
ATOM 7 C4' A B 235 91.733 121.813 -8.115 1.00 50.15 C
ATOM 8 O4' A B 235 91.653 121.471 -6.700 1.00 49.83 O
ATOM 9 C3' A B 235 92.552 123.098 -8.197 1.00 50.81 C
ATOM 10 O3' A B 235 91.662 124.203 -8.166 1.00 52.24 O
ATOM 11 C2' A B 235 93.378 123.036 -6.912 1.00 50.01 C
ATOM 12 O2' A B 235 93.830 124.300 -6.478 1.00 49.20 O
ATOM 13 C1' A B 235 92.365 122.428 -5.938 1.00 50.02 C
ATOM 14 N9 A B 235 92.944 121.758 -4.769 1.00 49.83 N
ATOM 15 C8 A B 235 93.735 120.626 -4.749 1.00 51.33 C
ATOM 16 N7 A B 235 94.126 120.273 -3.545 1.00 51.04 N
ATOM 17 C5 A B 235 93.553 121.227 -2.716 1.00 49.40 C
ATOM 18 C6 A B 235 93.601 121.417 -1.331 1.00 48.08 C
ATOM 19 N6 A B 235 94.293 120.641 -0.497 1.00 48.26 N
ATOM 20 N1 A B 235 92.910 122.456 -0.822 1.00 49.02 N
ATOM 21 C2 A B 235 92.236 123.252 -1.663 1.00 48.60 C
ATOM 22 N3 A B 235 92.127 123.186 -2.980 1.00 48.42 N
ATOM 23 C4 A B 235 92.814 122.141 -3.455 1.00 48.90 C
ATOM 24 P A B 236 91.158 124.860 -9.541 1.00 53.07 P
ATOM 25 OP1 A B 236 92.180 124.573 -10.597 1.00 52.31 O
ATOM 26 OP2 A B 236 90.782 126.274 -9.230 1.00 52.29 O
ATOM 27 O5' A B 236 89.841 124.049 -9.929 1.00 50.88 O
TER

Atoms:
OP1: (97.079,123.587,5.635)
OP2: (97.531,124.596,3.343)
C3': (99.281,120.747,1.783)
C1': (98.497,120.174,-0.345)
C5': (96.966,121.756,2.252)
O4': (97.384,120.100,0.533)
C8: (98.086,119.776,-2.820)
O2': (100.763,120.990,-0.170)
C6: (96.271,122.568,-3.967)
C5: (97.002,121.521,-3.366)
C4: (97.326,121.669,-2.026)
P: (96.860,123.577,4.168)
C4': (97.775,120.539,1.863)
C2': (99.454,121.156,0.322)
C2: (96.325,123.619,-1.901)
N1: (95.934,123.619,-3.191)
N3: (97.021,122.702,-1.227)
N6: (95.903,122.579,-5.245)
N7: (97.493,120.318,-3.857)
N9: (98.005,120.532,-1.675)
O5': (97.267,122.137,3.613)
O3': (99.907,119.484,2.018)
OP1: (94.031,118.627,-10.131)
OP2: (95.930,119.368,-8.562)
C3': (92.552,123.098,-8.197)
C1': (92.365,122.428,-5.938)
C5': (92.324,120.654,-8.865)
O4': (91.653,121.471,-6.700)
C8: (93.735,120.626,-4.749)
O2': (93.830,124.300,-6.478)
C6: (93.601,121.417,-1.331)
C5: (93.553,121.227,-2.716)
C4: (92.814,122.141,-3.455)
P: (94.479,119.149,-8.813)
C4': (91.733,121.813,-8.115)
C2': (93.378,123.036,-6.912)
C2: (92.236,123.252,-1.663)
N1: (92.910,122.456,-0.822)
N3: (92.127,123.186,-2.980)
N6: (94.293,120.641,-0.497)
N7: (94.126,120.273,-3.545)
N9: (92.944,121.758,-4.769)
O5': (93.704,120.503,-8.506)
O3': (91.662,124.203,-8.166)
Image (generated by PyMOL):
PyMOL image
show in jmol