Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11482:11497
Extra
PDB:
ATOM 1 O3' A A1481 29.610 1.521 123.017 1.00 49.20 O
ATOM 2 P G A1482 29.749 -0.045 123.175 1.00 56.55 P
ATOM 3 OP1 G A1482 30.820 -0.476 122.231 1.00 56.16 O
ATOM 4 OP2 G A1482 28.408 -0.623 123.046 1.00 56.49 O
ATOM 5 O5' G A1482 30.246 -0.191 124.662 1.00 57.07 O
ATOM 6 C5' G A1482 31.450 0.416 125.078 1.00 57.26 C
ATOM 7 C4' G A1482 31.562 0.411 126.568 1.00 57.82 C
ATOM 8 O4' G A1482 30.470 1.157 127.158 1.00 58.12 O
ATOM 9 C3' G A1482 31.484 -0.945 127.230 1.00 57.97 C
ATOM 10 O3' G A1482 32.723 -1.623 127.147 1.00 57.88 O
ATOM 11 C2' G A1482 31.105 -0.568 128.647 1.00 58.55 C
ATOM 12 O2' G A1482 32.250 -0.097 129.340 1.00 58.85 O
ATOM 13 C1' G A1482 30.151 0.611 128.409 1.00 58.56 C
ATOM 14 N9 G A1482 28.753 0.176 128.366 1.00 58.53 N
ATOM 15 C8 G A1482 28.080 -0.181 127.219 1.00 58.07 C
ATOM 16 N7 G A1482 26.839 -0.548 127.418 1.00 58.15 N
ATOM 17 C5 G A1482 26.696 -0.439 128.785 1.00 58.70 C
ATOM 18 C6 G A1482 25.576 -0.719 129.566 1.00 59.02 C
ATOM 19 O6 G A1482 24.493 -1.121 129.181 1.00 58.87 O
ATOM 20 N1 G A1482 25.778 -0.482 130.900 1.00 59.56 N
ATOM 21 C2 G A1482 26.949 -0.030 131.417 1.00 59.78 C
ATOM 22 N2 G A1482 26.927 0.120 132.748 1.00 60.34 N
ATOM 23 N3 G A1482 28.044 0.241 130.707 1.00 59.48 N
ATOM 24 C4 G A1482 27.846 0.019 129.394 1.00 58.94 C
ATOM 25 P A A1483 32.856 -3.195 127.453 1.00 66.16 P
ATOM 26 OP1 A A1483 34.277 -3.546 127.222 1.00 66.05 O
ATOM 27 OP2 A A1483 31.814 -3.896 126.676 1.00 65.82 O
ATOM 28 O5' A A1483 32.530 -3.282 129.007 1.00 66.76 O
TER
ATOM 1 O3' G B1496 20.721 -6.781 129.110 1.00 75.36 O
ATOM 2 P U B1497 20.451 -5.204 129.200 1.00 69.16 P
ATOM 3 OP1 U B1497 19.011 -5.027 129.482 1.00 69.10 O
ATOM 4 OP2 U B1497 21.024 -4.590 127.988 1.00 68.86 O
ATOM 5 O5' U B1497 21.287 -4.763 130.471 1.00 69.84 O
ATOM 6 C5' U B1497 20.856 -5.132 131.783 1.00 70.24 C
ATOM 7 C4' U B1497 21.529 -4.311 132.854 1.00 70.88 C
ATOM 8 O4' U B1497 22.970 -4.569 132.833 1.00 71.03 O
ATOM 9 C3' U B1497 21.354 -2.794 132.727 1.00 71.06 C
ATOM 10 O3' U B1497 21.205 -2.231 134.035 1.00 71.65 O
ATOM 11 C2' U B1497 22.698 -2.356 132.126 1.00 71.08 C
ATOM 12 O2' U B1497 23.059 -0.994 132.362 1.00 71.45 O
ATOM 13 C1' U B1497 23.659 -3.341 132.804 1.00 71.32 C
ATOM 14 N1 U B1497 24.936 -3.518 132.094 1.00 71.19 N
ATOM 15 C2 U B1497 26.117 -3.224 132.750 1.00 71.66 C
ATOM 16 O2 U B1497 26.176 -2.889 133.918 1.00 72.19 O
ATOM 17 N3 U B1497 27.259 -3.354 131.986 1.00 71.50 N
ATOM 18 C4 U B1497 27.356 -3.725 130.650 1.00 70.92 C
ATOM 19 O4 U B1497 28.456 -3.820 130.070 1.00 70.83 O
ATOM 20 C5 U B1497 26.070 -3.978 130.073 1.00 70.47 C
ATOM 21 C6 U B1497 24.941 -3.870 130.784 1.00 70.61 C
ATOM 22 P U B1498 19.913 -1.366 134.427 1.00121.81 P
ATOM 23 OP1 U B1498 19.062 -1.277 133.226 1.00121.23 O
ATOM 24 OP2 U B1498 20.394 -0.105 135.060 1.00122.33 O
ATOM 25 O5' U B1498 19.223 -2.292 135.513 1.00121.99 O
TER
ATOM 2 P G A1482 29.749 -0.045 123.175 1.00 56.55 P
ATOM 3 OP1 G A1482 30.820 -0.476 122.231 1.00 56.16 O
ATOM 4 OP2 G A1482 28.408 -0.623 123.046 1.00 56.49 O
ATOM 5 O5' G A1482 30.246 -0.191 124.662 1.00 57.07 O
ATOM 6 C5' G A1482 31.450 0.416 125.078 1.00 57.26 C
ATOM 7 C4' G A1482 31.562 0.411 126.568 1.00 57.82 C
ATOM 8 O4' G A1482 30.470 1.157 127.158 1.00 58.12 O
ATOM 9 C3' G A1482 31.484 -0.945 127.230 1.00 57.97 C
ATOM 10 O3' G A1482 32.723 -1.623 127.147 1.00 57.88 O
ATOM 11 C2' G A1482 31.105 -0.568 128.647 1.00 58.55 C
ATOM 12 O2' G A1482 32.250 -0.097 129.340 1.00 58.85 O
ATOM 13 C1' G A1482 30.151 0.611 128.409 1.00 58.56 C
ATOM 14 N9 G A1482 28.753 0.176 128.366 1.00 58.53 N
ATOM 15 C8 G A1482 28.080 -0.181 127.219 1.00 58.07 C
ATOM 16 N7 G A1482 26.839 -0.548 127.418 1.00 58.15 N
ATOM 17 C5 G A1482 26.696 -0.439 128.785 1.00 58.70 C
ATOM 18 C6 G A1482 25.576 -0.719 129.566 1.00 59.02 C
ATOM 19 O6 G A1482 24.493 -1.121 129.181 1.00 58.87 O
ATOM 20 N1 G A1482 25.778 -0.482 130.900 1.00 59.56 N
ATOM 21 C2 G A1482 26.949 -0.030 131.417 1.00 59.78 C
ATOM 22 N2 G A1482 26.927 0.120 132.748 1.00 60.34 N
ATOM 23 N3 G A1482 28.044 0.241 130.707 1.00 59.48 N
ATOM 24 C4 G A1482 27.846 0.019 129.394 1.00 58.94 C
ATOM 25 P A A1483 32.856 -3.195 127.453 1.00 66.16 P
ATOM 26 OP1 A A1483 34.277 -3.546 127.222 1.00 66.05 O
ATOM 27 OP2 A A1483 31.814 -3.896 126.676 1.00 65.82 O
ATOM 28 O5' A A1483 32.530 -3.282 129.007 1.00 66.76 O
TER
ATOM 1 O3' G B1496 20.721 -6.781 129.110 1.00 75.36 O
ATOM 2 P U B1497 20.451 -5.204 129.200 1.00 69.16 P
ATOM 3 OP1 U B1497 19.011 -5.027 129.482 1.00 69.10 O
ATOM 4 OP2 U B1497 21.024 -4.590 127.988 1.00 68.86 O
ATOM 5 O5' U B1497 21.287 -4.763 130.471 1.00 69.84 O
ATOM 6 C5' U B1497 20.856 -5.132 131.783 1.00 70.24 C
ATOM 7 C4' U B1497 21.529 -4.311 132.854 1.00 70.88 C
ATOM 8 O4' U B1497 22.970 -4.569 132.833 1.00 71.03 O
ATOM 9 C3' U B1497 21.354 -2.794 132.727 1.00 71.06 C
ATOM 10 O3' U B1497 21.205 -2.231 134.035 1.00 71.65 O
ATOM 11 C2' U B1497 22.698 -2.356 132.126 1.00 71.08 C
ATOM 12 O2' U B1497 23.059 -0.994 132.362 1.00 71.45 O
ATOM 13 C1' U B1497 23.659 -3.341 132.804 1.00 71.32 C
ATOM 14 N1 U B1497 24.936 -3.518 132.094 1.00 71.19 N
ATOM 15 C2 U B1497 26.117 -3.224 132.750 1.00 71.66 C
ATOM 16 O2 U B1497 26.176 -2.889 133.918 1.00 72.19 O
ATOM 17 N3 U B1497 27.259 -3.354 131.986 1.00 71.50 N
ATOM 18 C4 U B1497 27.356 -3.725 130.650 1.00 70.92 C
ATOM 19 O4 U B1497 28.456 -3.820 130.070 1.00 70.83 O
ATOM 20 C5 U B1497 26.070 -3.978 130.073 1.00 70.47 C
ATOM 21 C6 U B1497 24.941 -3.870 130.784 1.00 70.61 C
ATOM 22 P U B1498 19.913 -1.366 134.427 1.00121.81 P
ATOM 23 OP1 U B1498 19.062 -1.277 133.226 1.00121.23 O
ATOM 24 OP2 U B1498 20.394 -0.105 135.060 1.00122.33 O
ATOM 25 O5' U B1498 19.223 -2.292 135.513 1.00121.99 O
TER
Atoms:
OP1: (30.820,-0.476,122.231)
OP2: (28.408,-0.623,123.046)
C3': (31.484,-0.945,127.230)
C1': (30.151,0.611,128.409)
C5': (31.450,0.416,125.078)
O6: (24.493,-1.121,129.181)
O4': (30.470,1.157,127.158)
C8: (28.080,-0.181,127.219)
C2: (26.949,-0.030,131.417)
C6: (25.576,-0.719,129.566)
C5: (26.696,-0.439,128.785)
C4: (27.846,0.019,129.394)
P: (29.749,-0.045,123.175)
C4': (31.562,0.411,126.568)
C2': (31.105,-0.568,128.647)
O2': (32.250,-0.097,129.340)
N1: (25.778,-0.482,130.900)
N2: (26.927,0.120,132.748)
N3: (28.044,0.241,130.707)
N7: (26.839,-0.548,127.418)
N9: (28.753,0.176,128.366)
O5': (30.246,-0.191,124.662)
O3': (32.723,-1.623,127.147)
OP2: (28.408,-0.623,123.046)
C3': (31.484,-0.945,127.230)
C1': (30.151,0.611,128.409)
C5': (31.450,0.416,125.078)
O6: (24.493,-1.121,129.181)
O4': (30.470,1.157,127.158)
C8: (28.080,-0.181,127.219)
C2: (26.949,-0.030,131.417)
C6: (25.576,-0.719,129.566)
C5: (26.696,-0.439,128.785)
C4: (27.846,0.019,129.394)
P: (29.749,-0.045,123.175)
C4': (31.562,0.411,126.568)
C2': (31.105,-0.568,128.647)
O2': (32.250,-0.097,129.340)
N1: (25.778,-0.482,130.900)
N2: (26.927,0.120,132.748)
N3: (28.044,0.241,130.707)
N7: (26.839,-0.548,127.418)
N9: (28.753,0.176,128.366)
O5': (30.246,-0.191,124.662)
O3': (32.723,-1.623,127.147)
C4: (27.356,-3.725,130.650)
N3: (27.259,-3.354,131.986)
OP1: (19.011,-5.027,129.482)
OP2: (21.024,-4.590,127.988)
C2: (26.117,-3.224,132.750)
C1': (23.659,-3.341,132.804)
C3': (21.354,-2.794,132.727)
O5': (21.287,-4.763,130.471)
O4': (22.970,-4.569,132.833)
C5': (20.856,-5.132,131.783)
P: (20.451,-5.204,129.200)
C4': (21.529,-4.311,132.854)
C2': (22.698,-2.356,132.126)
O2': (23.059,-0.994,132.362)
N1: (24.936,-3.518,132.094)
O4: (28.456,-3.820,130.070)
O2: (26.176,-2.889,133.918)
C6: (24.941,-3.870,130.784)
C5: (26.070,-3.978,130.073)
O3': (21.205,-2.231,134.035)
N3: (27.259,-3.354,131.986)
OP1: (19.011,-5.027,129.482)
OP2: (21.024,-4.590,127.988)
C2: (26.117,-3.224,132.750)
C1': (23.659,-3.341,132.804)
C3': (21.354,-2.794,132.727)
O5': (21.287,-4.763,130.471)
O4': (22.970,-4.569,132.833)
C5': (20.856,-5.132,131.783)
P: (20.451,-5.204,129.200)
C4': (21.529,-4.311,132.854)
C2': (22.698,-2.356,132.126)
O2': (23.059,-0.994,132.362)
N1: (24.936,-3.518,132.094)
O4: (28.456,-3.820,130.070)
O2: (26.176,-2.889,133.918)
C6: (24.941,-3.870,130.784)
C5: (26.070,-3.978,130.073)
O3': (21.205,-2.231,134.035)
Image (generated by PyMOL):