ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:12837:12807

Extra

PDB:
ATOM 1 O3' C A2836 9.748 64.266 67.319 1.00 52.59 O
ATOM 2 P G A2837 10.580 63.435 66.249 1.00 58.12 P
ATOM 3 OP1 G A2837 10.327 64.012 64.925 1.00 58.43 O
ATOM 4 OP2 G A2837 10.276 62.044 66.478 1.00 57.53 O
ATOM 5 O5' G A2837 12.058 63.744 66.664 1.00 58.02 O
ATOM 6 C5' G A2837 12.675 64.945 66.243 1.00 58.48 C
ATOM 7 C4' G A2837 13.944 65.211 67.001 1.00 58.41 C
ATOM 8 O4' G A2837 13.766 64.836 68.392 1.00 58.29 O
ATOM 9 C3' G A2837 15.177 64.421 66.589 1.00 57.84 C
ATOM 10 O3' G A2837 15.794 64.907 65.418 1.00 57.97 O
ATOM 11 C2' G A2837 16.042 64.602 67.817 1.00 57.82 C
ATOM 12 O2' G A2837 16.509 65.939 67.882 1.00 58.39 O
ATOM 13 C1' G A2837 15.001 64.405 68.926 1.00 57.91 C
ATOM 14 N9 G A2837 14.873 62.984 69.296 1.00 57.27 N
ATOM 15 C8 G A2837 13.769 62.220 69.074 1.00 57.09 C
ATOM 16 N7 G A2837 13.915 60.966 69.434 1.00 56.51 N
ATOM 17 C5 G A2837 15.214 60.905 69.914 1.00 56.30 C
ATOM 18 C6 G A2837 15.902 59.790 70.443 1.00 55.72 C
ATOM 19 O6 G A2837 15.499 58.620 70.604 1.00 55.27 O
ATOM 20 N1 G A2837 17.177 60.164 70.814 1.00 55.72 N
ATOM 21 C2 G A2837 17.693 61.430 70.706 1.00 56.21 C
ATOM 22 N2 G A2837 18.971 61.572 71.130 1.00 56.12 N
ATOM 23 N3 G A2837 17.040 62.473 70.219 1.00 56.76 N
ATOM 24 C4 G A2837 15.812 62.140 69.837 1.00 56.77 C
ATOM 25 P A A2838 15.516 64.241 63.973 1.00 61.72 P
ATOM 26 OP1 A A2838 14.042 64.082 63.816 1.00 61.87 O
ATOM 27 OP2 A A2838 16.381 63.044 63.852 1.00 61.04 O
ATOM 28 O5' A A2838 16.032 65.379 62.997 1.00 62.18 O
TER

ATOM 1 O3' U B2806 16.857 52.261 68.691 1.00 51.55 O
ATOM 2 P U B2807 16.447 52.952 70.057 1.00 49.85 P
ATOM 3 OP1 U B2807 16.572 51.902 71.139 1.00 49.46 O
ATOM 4 OP2 U B2807 15.144 53.619 69.832 1.00 50.29 O
ATOM 5 O5' U B2807 17.558 54.049 70.231 1.00 50.14 O
ATOM 6 C5' U B2807 18.932 53.722 70.269 1.00 49.84 C
ATOM 7 C4' U B2807 19.713 54.927 70.633 1.00 50.24 C
ATOM 8 O4' U B2807 19.669 55.827 69.513 1.00 50.58 O
ATOM 9 C3' U B2807 19.155 55.678 71.835 1.00 50.67 C
ATOM 10 O3' U B2807 20.180 56.024 72.728 1.00 50.73 O
ATOM 11 C2' U B2807 18.570 56.945 71.280 1.00 51.25 C
ATOM 12 O2' U B2807 18.827 58.077 72.082 1.00 51.73 O
ATOM 13 C1' U B2807 19.200 57.086 69.898 1.00 51.18 C
ATOM 14 N1 U B2807 18.222 57.493 68.933 1.00 51.45 N
ATOM 15 C2 U B2807 18.209 58.757 68.396 1.00 51.98 C
ATOM 16 O2 U B2807 19.093 59.570 68.598 1.00 52.22 O
ATOM 17 N3 U B2807 17.133 59.003 67.574 1.00 52.21 N
ATOM 18 C4 U B2807 16.093 58.107 67.344 1.00 51.97 C
ATOM 19 O4 U B2807 15.153 58.429 66.638 1.00 52.24 O
ATOM 20 C5 U B2807 16.171 56.830 67.994 1.00 51.43 C
ATOM 21 C6 U B2807 17.210 56.595 68.767 1.00 51.20 C
ATOM 22 P U B2808 20.092 55.526 74.232 1.00 53.85 P
ATOM 23 OP1 U B2808 20.360 54.054 74.212 1.00 53.21 O
ATOM 24 OP2 U B2808 18.822 56.023 74.767 1.00 54.24 O
ATOM 25 O5' U B2808 21.293 56.273 74.918 1.00 54.06 O
TER

Atoms:
OP1: (10.327,64.012,64.925)
OP2: (10.276,62.044,66.478)
C3': (15.177,64.421,66.589)
C1': (15.001,64.405,68.926)
C5': (12.675,64.945,66.243)
O6: (15.499,58.620,70.604)
O4': (13.766,64.836,68.392)
C8: (13.769,62.220,69.074)
C2: (17.693,61.430,70.706)
C6: (15.902,59.790,70.443)
C5: (15.214,60.905,69.914)
C4: (15.812,62.140,69.837)
P: (10.580,63.435,66.249)
C4': (13.944,65.211,67.001)
C2': (16.042,64.602,67.817)
O2': (16.509,65.939,67.882)
N1: (17.177,60.164,70.814)
N2: (18.971,61.572,71.130)
N3: (17.040,62.473,70.219)
N7: (13.915,60.966,69.434)
N9: (14.873,62.984,69.296)
O5': (12.058,63.744,66.664)
O3': (15.794,64.907,65.418)
C4: (16.093,58.107,67.344)
N3: (17.133,59.003,67.574)
OP1: (16.572,51.902,71.139)
OP2: (15.144,53.619,69.832)
C2: (18.209,58.757,68.396)
C1': (19.200,57.086,69.898)
C3': (19.155,55.678,71.835)
O5': (17.558,54.049,70.231)
O4': (19.669,55.827,69.513)
C5': (18.932,53.722,70.269)
P: (16.447,52.952,70.057)
C4': (19.713,54.927,70.633)
C2': (18.570,56.945,71.280)
O2': (18.827,58.077,72.082)
N1: (18.222,57.493,68.933)
O4: (15.153,58.429,66.638)
O2: (19.093,59.570,68.598)
C6: (17.210,56.595,68.767)
C5: (16.171,56.830,67.994)
O3': (20.180,56.024,72.728)
Image (generated by PyMOL):
PyMOL image
show in jmol