Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:5487:5504
Extra
PDB:
ATOM 1 O3' U A 486 101.709 16.707 329.694 1.00 64.65 O
ATOM 2 P A A 487 102.297 17.430 330.991 1.00 84.29 P
ATOM 3 OP1 A A 487 102.142 18.894 330.777 1.00 84.33 O
ATOM 4 OP2 A A 487 103.658 16.875 331.212 1.00 84.03 O
ATOM 5 O5' A A 487 101.313 16.934 332.145 1.00 85.02 O
ATOM 6 C5' A A 487 99.908 17.018 331.983 1.00 85.31 C
ATOM 7 C4' A A 487 99.170 16.422 333.154 1.00 86.00 C
ATOM 8 O4' A A 487 99.234 14.968 333.121 1.00 85.88 O
ATOM 9 C3' A A 487 99.692 16.763 334.535 1.00 86.52 C
ATOM 10 O3' A A 487 99.381 18.096 334.942 1.00 86.88 O
ATOM 11 C2' A A 487 99.035 15.666 335.375 1.00 87.02 C
ATOM 12 O2' A A 487 97.649 15.906 335.523 1.00 87.47 O
ATOM 13 C1' A A 487 99.203 14.464 334.450 1.00 86.48 C
ATOM 14 N9 A A 487 100.469 13.747 334.724 1.00 86.25 N
ATOM 15 C8 A A 487 101.676 13.911 334.100 1.00 85.67 C
ATOM 16 N7 A A 487 102.638 13.164 334.582 1.00 85.62 N
ATOM 17 C5 A A 487 102.034 12.455 335.609 1.00 86.22 C
ATOM 18 C6 A A 487 102.524 11.483 336.523 1.00 86.50 C
ATOM 19 N6 A A 487 103.790 11.046 336.528 1.00 86.18 N
ATOM 20 N1 A A 487 101.666 10.963 337.438 1.00 87.13 N
ATOM 21 C2 A A 487 100.409 11.413 337.418 1.00 87.45 C
ATOM 22 N3 A A 487 99.838 12.312 336.606 1.00 87.24 N
ATOM 23 C4 A A 487 100.704 12.812 335.710 1.00 86.61 C
ATOM 24 P G A 488 100.085 18.753 336.236 1.00 82.36 P
ATOM 25 OP1 G A 488 99.476 20.096 336.433 1.00 82.71 O
ATOM 26 OP2 G A 488 101.556 18.656 336.050 1.00 81.89 O
ATOM 27 O5' G A 488 99.607 17.772 337.384 1.00 82.96 O
TER
ATOM 1 O3' U B 503 111.274 8.186 340.282 1.00108.70 O
ATOM 2 P A B 504 110.782 6.892 339.479 1.00103.82 P
ATOM 3 OP1 A B 504 110.795 5.754 340.426 1.00104.27 O
ATOM 4 OP2 A B 504 111.604 6.806 338.241 1.00103.05 O
ATOM 5 O5' A B 504 109.281 7.263 339.110 1.00103.96 O
ATOM 6 C5' A B 504 108.342 7.632 340.117 1.00104.66 C
ATOM 7 C4' A B 504 107.064 8.161 339.503 1.00104.65 C
ATOM 8 O4' A B 504 107.300 9.473 338.921 1.00104.35 O
ATOM 9 C3' A B 504 106.500 7.336 338.355 1.00104.21 C
ATOM 10 O3' A B 504 105.710 6.260 338.800 1.00104.59 O
ATOM 11 C2' A B 504 105.738 8.358 337.520 1.00104.00 C
ATOM 12 O2' A B 504 104.460 8.628 338.092 1.00104.58 O
ATOM 13 C1' A B 504 106.623 9.593 337.687 1.00103.91 C
ATOM 14 N9 A B 504 107.644 9.693 336.635 1.00103.18 N
ATOM 15 C8 A B 504 108.909 9.166 336.734 1.00102.94 C
ATOM 16 N7 A B 504 109.656 9.401 335.689 1.00102.29 N
ATOM 17 C5 A B 504 108.825 10.150 334.848 1.00102.09 C
ATOM 18 C6 A B 504 109.033 10.711 333.573 1.00101.48 C
ATOM 19 N6 A B 504 110.191 10.605 332.903 1.00100.92 N
ATOM 20 N1 A B 504 108.002 11.386 333.016 1.00101.47 N
ATOM 21 C2 A B 504 106.850 11.494 333.688 1.00102.03 C
ATOM 22 N3 A B 504 106.534 11.017 334.887 1.00102.64 N
ATOM 23 C4 A B 504 107.576 10.346 335.422 1.00102.64 C
ATOM 24 P U B 505 106.218 4.759 338.582 1.00 81.87 P
ATOM 25 OP1 U B 505 106.458 4.183 339.929 1.00 82.48 O
ATOM 26 OP2 U B 505 107.359 4.809 337.605 1.00 81.15 O
ATOM 27 O5' U B 505 104.932 4.073 337.909 1.00 81.85 O
TER
ATOM 2 P A A 487 102.297 17.430 330.991 1.00 84.29 P
ATOM 3 OP1 A A 487 102.142 18.894 330.777 1.00 84.33 O
ATOM 4 OP2 A A 487 103.658 16.875 331.212 1.00 84.03 O
ATOM 5 O5' A A 487 101.313 16.934 332.145 1.00 85.02 O
ATOM 6 C5' A A 487 99.908 17.018 331.983 1.00 85.31 C
ATOM 7 C4' A A 487 99.170 16.422 333.154 1.00 86.00 C
ATOM 8 O4' A A 487 99.234 14.968 333.121 1.00 85.88 O
ATOM 9 C3' A A 487 99.692 16.763 334.535 1.00 86.52 C
ATOM 10 O3' A A 487 99.381 18.096 334.942 1.00 86.88 O
ATOM 11 C2' A A 487 99.035 15.666 335.375 1.00 87.02 C
ATOM 12 O2' A A 487 97.649 15.906 335.523 1.00 87.47 O
ATOM 13 C1' A A 487 99.203 14.464 334.450 1.00 86.48 C
ATOM 14 N9 A A 487 100.469 13.747 334.724 1.00 86.25 N
ATOM 15 C8 A A 487 101.676 13.911 334.100 1.00 85.67 C
ATOM 16 N7 A A 487 102.638 13.164 334.582 1.00 85.62 N
ATOM 17 C5 A A 487 102.034 12.455 335.609 1.00 86.22 C
ATOM 18 C6 A A 487 102.524 11.483 336.523 1.00 86.50 C
ATOM 19 N6 A A 487 103.790 11.046 336.528 1.00 86.18 N
ATOM 20 N1 A A 487 101.666 10.963 337.438 1.00 87.13 N
ATOM 21 C2 A A 487 100.409 11.413 337.418 1.00 87.45 C
ATOM 22 N3 A A 487 99.838 12.312 336.606 1.00 87.24 N
ATOM 23 C4 A A 487 100.704 12.812 335.710 1.00 86.61 C
ATOM 24 P G A 488 100.085 18.753 336.236 1.00 82.36 P
ATOM 25 OP1 G A 488 99.476 20.096 336.433 1.00 82.71 O
ATOM 26 OP2 G A 488 101.556 18.656 336.050 1.00 81.89 O
ATOM 27 O5' G A 488 99.607 17.772 337.384 1.00 82.96 O
TER
ATOM 1 O3' U B 503 111.274 8.186 340.282 1.00108.70 O
ATOM 2 P A B 504 110.782 6.892 339.479 1.00103.82 P
ATOM 3 OP1 A B 504 110.795 5.754 340.426 1.00104.27 O
ATOM 4 OP2 A B 504 111.604 6.806 338.241 1.00103.05 O
ATOM 5 O5' A B 504 109.281 7.263 339.110 1.00103.96 O
ATOM 6 C5' A B 504 108.342 7.632 340.117 1.00104.66 C
ATOM 7 C4' A B 504 107.064 8.161 339.503 1.00104.65 C
ATOM 8 O4' A B 504 107.300 9.473 338.921 1.00104.35 O
ATOM 9 C3' A B 504 106.500 7.336 338.355 1.00104.21 C
ATOM 10 O3' A B 504 105.710 6.260 338.800 1.00104.59 O
ATOM 11 C2' A B 504 105.738 8.358 337.520 1.00104.00 C
ATOM 12 O2' A B 504 104.460 8.628 338.092 1.00104.58 O
ATOM 13 C1' A B 504 106.623 9.593 337.687 1.00103.91 C
ATOM 14 N9 A B 504 107.644 9.693 336.635 1.00103.18 N
ATOM 15 C8 A B 504 108.909 9.166 336.734 1.00102.94 C
ATOM 16 N7 A B 504 109.656 9.401 335.689 1.00102.29 N
ATOM 17 C5 A B 504 108.825 10.150 334.848 1.00102.09 C
ATOM 18 C6 A B 504 109.033 10.711 333.573 1.00101.48 C
ATOM 19 N6 A B 504 110.191 10.605 332.903 1.00100.92 N
ATOM 20 N1 A B 504 108.002 11.386 333.016 1.00101.47 N
ATOM 21 C2 A B 504 106.850 11.494 333.688 1.00102.03 C
ATOM 22 N3 A B 504 106.534 11.017 334.887 1.00102.64 N
ATOM 23 C4 A B 504 107.576 10.346 335.422 1.00102.64 C
ATOM 24 P U B 505 106.218 4.759 338.582 1.00 81.87 P
ATOM 25 OP1 U B 505 106.458 4.183 339.929 1.00 82.48 O
ATOM 26 OP2 U B 505 107.359 4.809 337.605 1.00 81.15 O
ATOM 27 O5' U B 505 104.932 4.073 337.909 1.00 81.85 O
TER
Atoms:
OP1: (102.142,18.894,330.777)
OP2: (103.658,16.875,331.212)
C3': (99.692,16.763,334.535)
C1': (99.203,14.464,334.450)
C5': (99.908,17.018,331.983)
O4': (99.234,14.968,333.121)
C8: (101.676,13.911,334.100)
O2': (97.649,15.906,335.523)
C6: (102.524,11.483,336.523)
C5: (102.034,12.455,335.609)
C4: (100.704,12.812,335.710)
P: (102.297,17.430,330.991)
C4': (99.170,16.422,333.154)
C2': (99.035,15.666,335.375)
C2: (100.409,11.413,337.418)
N1: (101.666,10.963,337.438)
N3: (99.838,12.312,336.606)
N6: (103.790,11.046,336.528)
N7: (102.638,13.164,334.582)
N9: (100.469,13.747,334.724)
O5': (101.313,16.934,332.145)
O3': (99.381,18.096,334.942)
OP2: (103.658,16.875,331.212)
C3': (99.692,16.763,334.535)
C1': (99.203,14.464,334.450)
C5': (99.908,17.018,331.983)
O4': (99.234,14.968,333.121)
C8: (101.676,13.911,334.100)
O2': (97.649,15.906,335.523)
C6: (102.524,11.483,336.523)
C5: (102.034,12.455,335.609)
C4: (100.704,12.812,335.710)
P: (102.297,17.430,330.991)
C4': (99.170,16.422,333.154)
C2': (99.035,15.666,335.375)
C2: (100.409,11.413,337.418)
N1: (101.666,10.963,337.438)
N3: (99.838,12.312,336.606)
N6: (103.790,11.046,336.528)
N7: (102.638,13.164,334.582)
N9: (100.469,13.747,334.724)
O5': (101.313,16.934,332.145)
O3': (99.381,18.096,334.942)
OP1: (110.795,5.754,340.426)
OP2: (111.604,6.806,338.241)
C3': (106.500,7.336,338.355)
C1': (106.623,9.593,337.687)
C5': (108.342,7.632,340.117)
O4': (107.300,9.473,338.921)
C8: (108.909,9.166,336.734)
O2': (104.460,8.628,338.092)
C6: (109.033,10.711,333.573)
C5: (108.825,10.150,334.848)
C4: (107.576,10.346,335.422)
P: (110.782,6.892,339.479)
C4': (107.064,8.161,339.503)
C2': (105.738,8.358,337.520)
C2: (106.850,11.494,333.688)
N1: (108.002,11.386,333.016)
N3: (106.534,11.017,334.887)
N6: (110.191,10.605,332.903)
N7: (109.656,9.401,335.689)
N9: (107.644,9.693,336.635)
O5': (109.281,7.263,339.110)
O3': (105.710,6.260,338.800)
OP2: (111.604,6.806,338.241)
C3': (106.500,7.336,338.355)
C1': (106.623,9.593,337.687)
C5': (108.342,7.632,340.117)
O4': (107.300,9.473,338.921)
C8: (108.909,9.166,336.734)
O2': (104.460,8.628,338.092)
C6: (109.033,10.711,333.573)
C5: (108.825,10.150,334.848)
C4: (107.576,10.346,335.422)
P: (110.782,6.892,339.479)
C4': (107.064,8.161,339.503)
C2': (105.738,8.358,337.520)
C2: (106.850,11.494,333.688)
N1: (108.002,11.386,333.016)
N3: (106.534,11.017,334.887)
N6: (110.191,10.605,332.903)
N7: (109.656,9.401,335.689)
N9: (107.644,9.693,336.635)
O5': (109.281,7.263,339.110)
O3': (105.710,6.260,338.800)
Image (generated by PyMOL):