Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2085:A2084
Extra
PDB:
ATOM 1 O3' U A2084 -54.376 0.108 69.747 1.00 26.88 O
ATOM 2 P A A2085 -52.814 0.148 70.089 1.00 55.18 P
ATOM 3 OP1 A A2085 -52.701 0.696 71.463 1.00 52.95 O
ATOM 4 OP2 A A2085 -52.063 0.777 68.979 1.00 52.95 O
ATOM 5 O5' A A2085 -52.408 -1.382 70.119 1.00 29.78 O
ATOM 6 C5' A A2085 -52.989 -2.278 69.186 1.00 29.78 C
ATOM 7 C4' A A2085 -53.599 -3.451 69.902 1.00 29.78 C
ATOM 8 O4' A A2085 -54.329 -3.013 71.084 1.00 29.78 O
ATOM 9 C3' A A2085 -54.583 -4.240 69.048 1.00 29.78 C
ATOM 10 O3' A A2085 -54.443 -5.606 69.339 1.00 29.78 O
ATOM 11 C2' A A2085 -55.934 -3.780 69.568 1.00 29.78 C
ATOM 12 O2' A A2085 -56.939 -4.752 69.464 1.00 29.78 O
ATOM 13 C1' A A2085 -55.630 -3.544 71.042 1.00 29.78 C
ATOM 14 N9 A A2085 -56.565 -2.574 71.581 1.00 40.06 N
ATOM 15 C8 A A2085 -56.555 -1.210 71.482 1.00 40.06 C
ATOM 16 N7 A A2085 -57.610 -0.640 72.004 1.00 40.06 N
ATOM 17 C5 A A2085 -58.352 -1.704 72.496 1.00 40.06 C
ATOM 18 C6 A A2085 -59.593 -1.768 73.146 1.00 40.06 C
ATOM 19 N6 A A2085 -60.337 -0.699 73.411 1.00 40.06 N
ATOM 20 N1 A A2085 -60.052 -2.983 73.510 1.00 40.06 N
ATOM 21 C2 A A2085 -59.304 -4.059 73.219 1.00 40.06 C
ATOM 22 N3 A A2085 -58.125 -4.125 72.601 1.00 40.06 N
ATOM 23 C4 A A2085 -57.704 -2.897 72.263 1.00 40.06 C
ATOM 24 P A A2086 -53.842 -6.595 68.237 1.00 11.07 P
ATOM 25 OP1 A A2086 -52.413 -6.248 68.017 1.00 16.75 O
ATOM 26 OP2 A A2086 -54.763 -6.636 67.073 1.00 16.74 O
ATOM 27 O5' A A2086 -53.922 -7.972 69.028 1.00 13.75 O
TER
ATOM 1 O3' C B2083 -56.681 5.655 66.868 1.00 16.69 O
ATOM 2 P U B2084 -55.550 4.649 66.357 1.00 37.59 P
ATOM 3 OP1 U B2084 -54.240 5.178 66.806 1.00 53.17 O
ATOM 4 OP2 U B2084 -55.791 4.425 64.909 1.00 53.17 O
ATOM 5 O5' U B2084 -55.855 3.310 67.179 1.00 26.88 O
ATOM 6 C5' U B2084 -55.759 3.300 68.624 1.00 26.88 C
ATOM 7 C4' U B2084 -55.829 1.887 69.180 1.00 26.88 C
ATOM 8 O4' U B2084 -57.159 1.341 69.022 1.00 26.88 O
ATOM 9 C3' U B2084 -54.859 0.843 68.648 1.00 26.88 C
ATOM 10 O3' U B2084 -54.376 0.108 69.747 1.00 26.88 O
ATOM 11 C2' U B2084 -55.730 -0.041 67.757 1.00 26.88 C
ATOM 12 O2' U B2084 -55.319 -1.392 67.719 1.00 26.88 O
ATOM 13 C1' U B2084 -57.086 0.054 68.449 1.00 26.88 C
ATOM 14 N1 U B2084 -58.234 -0.089 67.544 1.00 25.63 N
ATOM 15 C2 U B2084 -59.151 -1.082 67.823 1.00 25.63 C
ATOM 16 O2 U B2084 -59.007 -1.877 68.735 1.00 25.63 O
ATOM 17 N3 U B2084 -60.238 -1.116 66.986 1.00 25.63 N
ATOM 18 C4 U B2084 -60.484 -0.284 65.915 1.00 25.63 C
ATOM 19 O4 U B2084 -61.569 -0.353 65.328 1.00 25.63 O
ATOM 20 C5 U B2084 -59.465 0.686 65.669 1.00 25.63 C
ATOM 21 C6 U B2084 -58.405 0.752 66.471 1.00 25.63 C
ATOM 22 P A B2085 -52.814 0.148 70.089 1.00 55.18 P
ATOM 23 OP1 A B2085 -52.701 0.696 71.463 1.00 52.95 O
ATOM 24 OP2 A B2085 -52.063 0.777 68.979 1.00 52.95 O
ATOM 25 O5' A B2085 -52.408 -1.382 70.119 1.00 29.78 O
TER
ATOM 2 P A A2085 -52.814 0.148 70.089 1.00 55.18 P
ATOM 3 OP1 A A2085 -52.701 0.696 71.463 1.00 52.95 O
ATOM 4 OP2 A A2085 -52.063 0.777 68.979 1.00 52.95 O
ATOM 5 O5' A A2085 -52.408 -1.382 70.119 1.00 29.78 O
ATOM 6 C5' A A2085 -52.989 -2.278 69.186 1.00 29.78 C
ATOM 7 C4' A A2085 -53.599 -3.451 69.902 1.00 29.78 C
ATOM 8 O4' A A2085 -54.329 -3.013 71.084 1.00 29.78 O
ATOM 9 C3' A A2085 -54.583 -4.240 69.048 1.00 29.78 C
ATOM 10 O3' A A2085 -54.443 -5.606 69.339 1.00 29.78 O
ATOM 11 C2' A A2085 -55.934 -3.780 69.568 1.00 29.78 C
ATOM 12 O2' A A2085 -56.939 -4.752 69.464 1.00 29.78 O
ATOM 13 C1' A A2085 -55.630 -3.544 71.042 1.00 29.78 C
ATOM 14 N9 A A2085 -56.565 -2.574 71.581 1.00 40.06 N
ATOM 15 C8 A A2085 -56.555 -1.210 71.482 1.00 40.06 C
ATOM 16 N7 A A2085 -57.610 -0.640 72.004 1.00 40.06 N
ATOM 17 C5 A A2085 -58.352 -1.704 72.496 1.00 40.06 C
ATOM 18 C6 A A2085 -59.593 -1.768 73.146 1.00 40.06 C
ATOM 19 N6 A A2085 -60.337 -0.699 73.411 1.00 40.06 N
ATOM 20 N1 A A2085 -60.052 -2.983 73.510 1.00 40.06 N
ATOM 21 C2 A A2085 -59.304 -4.059 73.219 1.00 40.06 C
ATOM 22 N3 A A2085 -58.125 -4.125 72.601 1.00 40.06 N
ATOM 23 C4 A A2085 -57.704 -2.897 72.263 1.00 40.06 C
ATOM 24 P A A2086 -53.842 -6.595 68.237 1.00 11.07 P
ATOM 25 OP1 A A2086 -52.413 -6.248 68.017 1.00 16.75 O
ATOM 26 OP2 A A2086 -54.763 -6.636 67.073 1.00 16.74 O
ATOM 27 O5' A A2086 -53.922 -7.972 69.028 1.00 13.75 O
TER
ATOM 1 O3' C B2083 -56.681 5.655 66.868 1.00 16.69 O
ATOM 2 P U B2084 -55.550 4.649 66.357 1.00 37.59 P
ATOM 3 OP1 U B2084 -54.240 5.178 66.806 1.00 53.17 O
ATOM 4 OP2 U B2084 -55.791 4.425 64.909 1.00 53.17 O
ATOM 5 O5' U B2084 -55.855 3.310 67.179 1.00 26.88 O
ATOM 6 C5' U B2084 -55.759 3.300 68.624 1.00 26.88 C
ATOM 7 C4' U B2084 -55.829 1.887 69.180 1.00 26.88 C
ATOM 8 O4' U B2084 -57.159 1.341 69.022 1.00 26.88 O
ATOM 9 C3' U B2084 -54.859 0.843 68.648 1.00 26.88 C
ATOM 10 O3' U B2084 -54.376 0.108 69.747 1.00 26.88 O
ATOM 11 C2' U B2084 -55.730 -0.041 67.757 1.00 26.88 C
ATOM 12 O2' U B2084 -55.319 -1.392 67.719 1.00 26.88 O
ATOM 13 C1' U B2084 -57.086 0.054 68.449 1.00 26.88 C
ATOM 14 N1 U B2084 -58.234 -0.089 67.544 1.00 25.63 N
ATOM 15 C2 U B2084 -59.151 -1.082 67.823 1.00 25.63 C
ATOM 16 O2 U B2084 -59.007 -1.877 68.735 1.00 25.63 O
ATOM 17 N3 U B2084 -60.238 -1.116 66.986 1.00 25.63 N
ATOM 18 C4 U B2084 -60.484 -0.284 65.915 1.00 25.63 C
ATOM 19 O4 U B2084 -61.569 -0.353 65.328 1.00 25.63 O
ATOM 20 C5 U B2084 -59.465 0.686 65.669 1.00 25.63 C
ATOM 21 C6 U B2084 -58.405 0.752 66.471 1.00 25.63 C
ATOM 22 P A B2085 -52.814 0.148 70.089 1.00 55.18 P
ATOM 23 OP1 A B2085 -52.701 0.696 71.463 1.00 52.95 O
ATOM 24 OP2 A B2085 -52.063 0.777 68.979 1.00 52.95 O
ATOM 25 O5' A B2085 -52.408 -1.382 70.119 1.00 29.78 O
TER
Atoms:
OP1: (-52.701,0.696,71.463)
OP2: (-52.063,0.777,68.979)
C3': (-54.583,-4.240,69.048)
C1': (-55.630,-3.544,71.042)
C5': (-52.989,-2.278,69.186)
O4': (-54.329,-3.013,71.084)
C8: (-56.555,-1.210,71.482)
O2': (-56.939,-4.752,69.464)
C6: (-59.593,-1.768,73.146)
C5: (-58.352,-1.704,72.496)
C4: (-57.704,-2.897,72.263)
P: (-52.814,0.148,70.089)
C4': (-53.599,-3.451,69.902)
C2': (-55.934,-3.780,69.568)
C2: (-59.304,-4.059,73.219)
N1: (-60.052,-2.983,73.510)
N3: (-58.125,-4.125,72.601)
N6: (-60.337,-0.699,73.411)
N7: (-57.610,-0.640,72.004)
N9: (-56.565,-2.574,71.581)
O5': (-52.408,-1.382,70.119)
O3': (-54.443,-5.606,69.339)
OP2: (-52.063,0.777,68.979)
C3': (-54.583,-4.240,69.048)
C1': (-55.630,-3.544,71.042)
C5': (-52.989,-2.278,69.186)
O4': (-54.329,-3.013,71.084)
C8: (-56.555,-1.210,71.482)
O2': (-56.939,-4.752,69.464)
C6: (-59.593,-1.768,73.146)
C5: (-58.352,-1.704,72.496)
C4: (-57.704,-2.897,72.263)
P: (-52.814,0.148,70.089)
C4': (-53.599,-3.451,69.902)
C2': (-55.934,-3.780,69.568)
C2: (-59.304,-4.059,73.219)
N1: (-60.052,-2.983,73.510)
N3: (-58.125,-4.125,72.601)
N6: (-60.337,-0.699,73.411)
N7: (-57.610,-0.640,72.004)
N9: (-56.565,-2.574,71.581)
O5': (-52.408,-1.382,70.119)
O3': (-54.443,-5.606,69.339)
C4: (-60.484,-0.284,65.915)
N3: (-60.238,-1.116,66.986)
OP1: (-54.240,5.178,66.806)
OP2: (-55.791,4.425,64.909)
C2: (-59.151,-1.082,67.823)
C1': (-57.086,0.054,68.449)
C3': (-54.859,0.843,68.648)
O5': (-55.855,3.310,67.179)
O4': (-57.159,1.341,69.022)
C5': (-55.759,3.300,68.624)
P: (-55.550,4.649,66.357)
C4': (-55.829,1.887,69.180)
C2': (-55.730,-0.041,67.757)
O2': (-55.319,-1.392,67.719)
N1: (-58.234,-0.089,67.544)
O4: (-61.569,-0.353,65.328)
O2: (-59.007,-1.877,68.735)
C6: (-58.405,0.752,66.471)
C5: (-59.465,0.686,65.669)
O3': (-54.376,0.108,69.747)
N3: (-60.238,-1.116,66.986)
OP1: (-54.240,5.178,66.806)
OP2: (-55.791,4.425,64.909)
C2: (-59.151,-1.082,67.823)
C1': (-57.086,0.054,68.449)
C3': (-54.859,0.843,68.648)
O5': (-55.855,3.310,67.179)
O4': (-57.159,1.341,69.022)
C5': (-55.759,3.300,68.624)
P: (-55.550,4.649,66.357)
C4': (-55.829,1.887,69.180)
C2': (-55.730,-0.041,67.757)
O2': (-55.319,-1.392,67.719)
N1: (-58.234,-0.089,67.544)
O4: (-61.569,-0.353,65.328)
O2: (-59.007,-1.877,68.735)
C6: (-58.405,0.752,66.471)
C5: (-59.465,0.686,65.669)
O3': (-54.376,0.108,69.747)
Image (generated by PyMOL):