Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0250:0235
Extra
PDB:
ATOM 1 O3' A A 249 94.887 122.673 3.277 1.00 45.84 O
ATOM 2 P A A 250 96.469 122.650 3.579 1.00 48.10 P
ATOM 3 OP1 A A 250 96.680 122.547 5.039 1.00 51.37 O
ATOM 4 OP2 A A 250 97.123 123.751 2.827 1.00 51.40 O
ATOM 5 O5' A A 250 96.969 121.279 2.953 1.00 49.07 O
ATOM 6 C5' A A 250 96.610 120.900 1.617 1.00 47.41 C
ATOM 7 C4' A A 250 97.371 119.660 1.219 1.00 46.87 C
ATOM 8 O4' A A 250 96.935 119.239 -0.099 1.00 49.26 O
ATOM 9 C3' A A 250 98.880 119.833 1.123 1.00 46.56 C
ATOM 10 O3' A A 250 99.489 118.566 1.371 1.00 44.02 O
ATOM 11 C2' A A 250 99.057 120.218 -0.345 1.00 48.25 C
ATOM 12 O2' A A 250 100.353 119.953 -0.847 1.00 48.74 O
ATOM 13 C1' A A 250 98.022 119.306 -1.003 1.00 49.38 C
ATOM 14 N9 A A 250 97.513 119.755 -2.301 1.00 50.45 N
ATOM 15 C8 A A 250 97.686 119.125 -3.509 1.00 50.88 C
ATOM 16 N7 A A 250 97.110 119.740 -4.513 1.00 50.86 N
ATOM 17 C5 A A 250 96.518 120.851 -3.930 1.00 50.32 C
ATOM 18 C6 A A 250 95.748 121.898 -4.461 1.00 49.77 C
ATOM 19 N6 A A 250 95.428 121.999 -5.753 1.00 48.87 N
ATOM 20 N1 A A 250 95.309 122.849 -3.610 1.00 51.24 N
ATOM 21 C2 A A 250 95.625 122.744 -2.314 1.00 50.11 C
ATOM 22 N3 A A 250 96.337 121.805 -1.694 1.00 51.55 N
ATOM 23 C4 A A 250 96.760 120.876 -2.568 1.00 50.32 C
ATOM 24 P U A 251 100.553 118.397 2.564 1.00 43.84 P
ATOM 25 OP1 U A 251 101.389 119.629 2.683 1.00 44.53 O
ATOM 26 OP2 U A 251 101.223 117.075 2.370 1.00 41.35 O
ATOM 27 O5' U A 251 99.643 118.315 3.870 1.00 43.50 O
TER
ATOM 1 O3' G B 234 93.516 117.271 -8.263 1.00 57.28 O
ATOM 2 P A B 235 93.995 118.242 -9.444 1.00 57.11 P
ATOM 3 OP1 A B 235 93.495 117.656 -10.719 1.00 58.67 O
ATOM 4 OP2 A B 235 95.452 118.472 -9.266 1.00 56.50 O
ATOM 5 O5' A B 235 93.207 119.598 -9.165 1.00 55.87 O
ATOM 6 C5' A B 235 91.794 119.714 -9.454 1.00 53.76 C
ATOM 7 C4' A B 235 91.204 120.879 -8.689 1.00 54.06 C
ATOM 8 O4' A B 235 91.082 120.533 -7.274 1.00 52.86 O
ATOM 9 C3' A B 235 92.042 122.155 -8.734 1.00 53.12 C
ATOM 10 O3' A B 235 91.185 123.290 -8.633 1.00 54.90 O
ATOM 11 C2' A B 235 92.867 122.026 -7.457 1.00 52.14 C
ATOM 12 O2' A B 235 93.419 123.233 -6.969 1.00 53.21 O
ATOM 13 C1' A B 235 91.815 121.462 -6.503 1.00 51.11 C
ATOM 14 N9 A B 235 92.367 120.787 -5.330 1.00 48.87 N
ATOM 15 C8 A B 235 93.054 119.600 -5.274 1.00 47.85 C
ATOM 16 N7 A B 235 93.461 119.282 -4.071 1.00 45.59 N
ATOM 17 C5 A B 235 93.000 120.326 -3.277 1.00 46.11 C
ATOM 18 C6 A B 235 93.114 120.589 -1.899 1.00 43.52 C
ATOM 19 N6 A B 235 93.755 119.789 -1.046 1.00 41.62 N
ATOM 20 N1 A B 235 92.543 121.717 -1.426 1.00 42.81 N
ATOM 21 C2 A B 235 91.906 122.520 -2.282 1.00 44.23 C
ATOM 22 N3 A B 235 91.734 122.383 -3.596 1.00 47.23 N
ATOM 23 C4 A B 235 92.315 121.253 -4.037 1.00 46.63 C
ATOM 24 P A B 236 90.606 123.974 -9.966 1.00 56.69 P
ATOM 25 OP1 A B 236 91.673 123.872 -10.998 1.00 57.39 O
ATOM 26 OP2 A B 236 90.067 125.309 -9.590 1.00 56.48 O
ATOM 27 O5' A B 236 89.379 123.045 -10.395 1.00 54.38 O
TER
ATOM 2 P A A 250 96.469 122.650 3.579 1.00 48.10 P
ATOM 3 OP1 A A 250 96.680 122.547 5.039 1.00 51.37 O
ATOM 4 OP2 A A 250 97.123 123.751 2.827 1.00 51.40 O
ATOM 5 O5' A A 250 96.969 121.279 2.953 1.00 49.07 O
ATOM 6 C5' A A 250 96.610 120.900 1.617 1.00 47.41 C
ATOM 7 C4' A A 250 97.371 119.660 1.219 1.00 46.87 C
ATOM 8 O4' A A 250 96.935 119.239 -0.099 1.00 49.26 O
ATOM 9 C3' A A 250 98.880 119.833 1.123 1.00 46.56 C
ATOM 10 O3' A A 250 99.489 118.566 1.371 1.00 44.02 O
ATOM 11 C2' A A 250 99.057 120.218 -0.345 1.00 48.25 C
ATOM 12 O2' A A 250 100.353 119.953 -0.847 1.00 48.74 O
ATOM 13 C1' A A 250 98.022 119.306 -1.003 1.00 49.38 C
ATOM 14 N9 A A 250 97.513 119.755 -2.301 1.00 50.45 N
ATOM 15 C8 A A 250 97.686 119.125 -3.509 1.00 50.88 C
ATOM 16 N7 A A 250 97.110 119.740 -4.513 1.00 50.86 N
ATOM 17 C5 A A 250 96.518 120.851 -3.930 1.00 50.32 C
ATOM 18 C6 A A 250 95.748 121.898 -4.461 1.00 49.77 C
ATOM 19 N6 A A 250 95.428 121.999 -5.753 1.00 48.87 N
ATOM 20 N1 A A 250 95.309 122.849 -3.610 1.00 51.24 N
ATOM 21 C2 A A 250 95.625 122.744 -2.314 1.00 50.11 C
ATOM 22 N3 A A 250 96.337 121.805 -1.694 1.00 51.55 N
ATOM 23 C4 A A 250 96.760 120.876 -2.568 1.00 50.32 C
ATOM 24 P U A 251 100.553 118.397 2.564 1.00 43.84 P
ATOM 25 OP1 U A 251 101.389 119.629 2.683 1.00 44.53 O
ATOM 26 OP2 U A 251 101.223 117.075 2.370 1.00 41.35 O
ATOM 27 O5' U A 251 99.643 118.315 3.870 1.00 43.50 O
TER
ATOM 1 O3' G B 234 93.516 117.271 -8.263 1.00 57.28 O
ATOM 2 P A B 235 93.995 118.242 -9.444 1.00 57.11 P
ATOM 3 OP1 A B 235 93.495 117.656 -10.719 1.00 58.67 O
ATOM 4 OP2 A B 235 95.452 118.472 -9.266 1.00 56.50 O
ATOM 5 O5' A B 235 93.207 119.598 -9.165 1.00 55.87 O
ATOM 6 C5' A B 235 91.794 119.714 -9.454 1.00 53.76 C
ATOM 7 C4' A B 235 91.204 120.879 -8.689 1.00 54.06 C
ATOM 8 O4' A B 235 91.082 120.533 -7.274 1.00 52.86 O
ATOM 9 C3' A B 235 92.042 122.155 -8.734 1.00 53.12 C
ATOM 10 O3' A B 235 91.185 123.290 -8.633 1.00 54.90 O
ATOM 11 C2' A B 235 92.867 122.026 -7.457 1.00 52.14 C
ATOM 12 O2' A B 235 93.419 123.233 -6.969 1.00 53.21 O
ATOM 13 C1' A B 235 91.815 121.462 -6.503 1.00 51.11 C
ATOM 14 N9 A B 235 92.367 120.787 -5.330 1.00 48.87 N
ATOM 15 C8 A B 235 93.054 119.600 -5.274 1.00 47.85 C
ATOM 16 N7 A B 235 93.461 119.282 -4.071 1.00 45.59 N
ATOM 17 C5 A B 235 93.000 120.326 -3.277 1.00 46.11 C
ATOM 18 C6 A B 235 93.114 120.589 -1.899 1.00 43.52 C
ATOM 19 N6 A B 235 93.755 119.789 -1.046 1.00 41.62 N
ATOM 20 N1 A B 235 92.543 121.717 -1.426 1.00 42.81 N
ATOM 21 C2 A B 235 91.906 122.520 -2.282 1.00 44.23 C
ATOM 22 N3 A B 235 91.734 122.383 -3.596 1.00 47.23 N
ATOM 23 C4 A B 235 92.315 121.253 -4.037 1.00 46.63 C
ATOM 24 P A B 236 90.606 123.974 -9.966 1.00 56.69 P
ATOM 25 OP1 A B 236 91.673 123.872 -10.998 1.00 57.39 O
ATOM 26 OP2 A B 236 90.067 125.309 -9.590 1.00 56.48 O
ATOM 27 O5' A B 236 89.379 123.045 -10.395 1.00 54.38 O
TER
Atoms:
OP1: (96.680,122.547,5.039)
OP2: (97.123,123.751,2.827)
C3': (98.880,119.833,1.123)
C1': (98.022,119.306,-1.003)
C5': (96.610,120.900,1.617)
O4': (96.935,119.239,-0.099)
C8: (97.686,119.125,-3.509)
O2': (100.353,119.953,-0.847)
C6: (95.748,121.898,-4.461)
C5: (96.518,120.851,-3.930)
C4: (96.760,120.876,-2.568)
P: (96.469,122.650,3.579)
C4': (97.371,119.660,1.219)
C2': (99.057,120.218,-0.345)
C2: (95.625,122.744,-2.314)
N1: (95.309,122.849,-3.610)
N3: (96.337,121.805,-1.694)
N6: (95.428,121.999,-5.753)
N7: (97.110,119.740,-4.513)
N9: (97.513,119.755,-2.301)
O5': (96.969,121.279,2.953)
O3': (99.489,118.566,1.371)
OP2: (97.123,123.751,2.827)
C3': (98.880,119.833,1.123)
C1': (98.022,119.306,-1.003)
C5': (96.610,120.900,1.617)
O4': (96.935,119.239,-0.099)
C8: (97.686,119.125,-3.509)
O2': (100.353,119.953,-0.847)
C6: (95.748,121.898,-4.461)
C5: (96.518,120.851,-3.930)
C4: (96.760,120.876,-2.568)
P: (96.469,122.650,3.579)
C4': (97.371,119.660,1.219)
C2': (99.057,120.218,-0.345)
C2: (95.625,122.744,-2.314)
N1: (95.309,122.849,-3.610)
N3: (96.337,121.805,-1.694)
N6: (95.428,121.999,-5.753)
N7: (97.110,119.740,-4.513)
N9: (97.513,119.755,-2.301)
O5': (96.969,121.279,2.953)
O3': (99.489,118.566,1.371)
OP1: (93.495,117.656,-10.719)
OP2: (95.452,118.472,-9.266)
C3': (92.042,122.155,-8.734)
C1': (91.815,121.462,-6.503)
C5': (91.794,119.714,-9.454)
O4': (91.082,120.533,-7.274)
C8: (93.054,119.600,-5.274)
O2': (93.419,123.233,-6.969)
C6: (93.114,120.589,-1.899)
C5: (93.000,120.326,-3.277)
C4: (92.315,121.253,-4.037)
P: (93.995,118.242,-9.444)
C4': (91.204,120.879,-8.689)
C2': (92.867,122.026,-7.457)
C2: (91.906,122.520,-2.282)
N1: (92.543,121.717,-1.426)
N3: (91.734,122.383,-3.596)
N6: (93.755,119.789,-1.046)
N7: (93.461,119.282,-4.071)
N9: (92.367,120.787,-5.330)
O5': (93.207,119.598,-9.165)
O3': (91.185,123.290,-8.633)
OP2: (95.452,118.472,-9.266)
C3': (92.042,122.155,-8.734)
C1': (91.815,121.462,-6.503)
C5': (91.794,119.714,-9.454)
O4': (91.082,120.533,-7.274)
C8: (93.054,119.600,-5.274)
O2': (93.419,123.233,-6.969)
C6: (93.114,120.589,-1.899)
C5: (93.000,120.326,-3.277)
C4: (92.315,121.253,-4.037)
P: (93.995,118.242,-9.444)
C4': (91.204,120.879,-8.689)
C2': (92.867,122.026,-7.457)
C2: (91.906,122.520,-2.282)
N1: (92.543,121.717,-1.426)
N3: (91.734,122.383,-3.596)
N6: (93.755,119.789,-1.046)
N7: (93.461,119.282,-4.071)
N9: (92.367,120.787,-5.330)
O5': (93.207,119.598,-9.165)
O3': (91.185,123.290,-8.633)
Image (generated by PyMOL):