Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02153:02152
Extra
PDB:
ATOM 1 O3' U A2152 58.811 81.049 92.955 1.00 39.09 O
ATOM 2 P A A2153 60.403 80.944 92.796 1.00 37.98 P
ATOM 3 OP1 A A2153 60.677 80.726 91.356 1.00 36.94 O
ATOM 4 OP2 A A2153 60.963 80.002 93.791 1.00 37.93 O
ATOM 5 O5' A A2153 60.859 82.419 93.180 1.00 35.67 O
ATOM 6 C5' A A2153 60.394 83.552 92.424 1.00 34.49 C
ATOM 7 C4' A A2153 60.341 84.771 93.300 1.00 35.32 C
ATOM 8 O4' A A2153 59.316 84.578 94.302 1.00 36.83 O
ATOM 9 C3' A A2153 61.611 85.039 94.088 1.00 37.17 C
ATOM 10 O3' A A2153 62.567 85.757 93.305 1.00 38.87 O
ATOM 11 C2' A A2153 61.084 85.798 95.301 1.00 38.03 C
ATOM 12 O2' A A2153 60.780 87.154 95.056 1.00 41.44 O
ATOM 13 C1' A A2153 59.765 85.071 95.553 1.00 37.23 C
ATOM 14 N9 A A2153 59.898 83.934 96.466 1.00 37.59 N
ATOM 15 C8 A A2153 59.875 82.598 96.148 1.00 37.11 C
ATOM 16 N7 A A2153 60.002 81.809 97.184 1.00 38.09 N
ATOM 17 C5 A A2153 60.123 82.682 98.256 1.00 37.36 C
ATOM 18 C6 A A2153 60.280 82.469 99.630 1.00 37.37 C
ATOM 19 N6 A A2153 60.342 81.257 100.188 1.00 38.49 N
ATOM 20 N1 A A2153 60.367 83.554 100.427 1.00 37.36 N
ATOM 21 C2 A A2153 60.300 84.761 99.870 1.00 36.48 C
ATOM 22 N3 A A2153 60.154 85.089 98.596 1.00 36.82 N
ATOM 23 C4 A A2153 60.067 83.992 97.829 1.00 37.09 C
ATOM 24 P U A2154 64.139 85.409 93.427 1.00 40.33 P
ATOM 25 OP1 U A2154 64.786 85.841 92.161 1.00 36.51 O
ATOM 26 OP2 U A2154 64.314 84.010 93.895 1.00 39.78 O
ATOM 27 O5' U A2154 64.627 86.353 94.608 1.00 38.39 O
TER
ATOM 1 O3' A B2151 56.491 76.460 89.521 1.00 41.37 O
ATOM 2 P U B2152 57.972 76.515 90.164 1.00 43.62 P
ATOM 3 OP1 U B2152 58.914 76.967 89.100 1.00 41.56 O
ATOM 4 OP2 U B2152 58.254 75.247 90.893 1.00 43.72 O
ATOM 5 O5' U B2152 57.857 77.661 91.257 1.00 39.84 O
ATOM 6 C5' U B2152 57.504 78.989 90.879 1.00 38.66 C
ATOM 7 C4' U B2152 57.022 79.740 92.077 1.00 37.67 C
ATOM 8 O4' U B2152 55.978 78.958 92.680 1.00 39.79 O
ATOM 9 C3' U B2152 58.033 79.888 93.197 1.00 38.37 C
ATOM 10 O3' U B2152 58.811 81.049 92.955 1.00 39.09 O
ATOM 11 C2' U B2152 57.136 80.105 94.412 1.00 38.76 C
ATOM 12 O2' U B2152 56.650 81.427 94.513 1.00 38.48 O
ATOM 13 C1' U B2152 55.936 79.226 94.065 1.00 39.58 C
ATOM 14 N1 U B2152 55.815 77.957 94.795 1.00 40.18 N
ATOM 15 C2 U B2152 55.197 77.996 96.032 1.00 40.82 C
ATOM 16 O2 U B2152 54.785 79.032 96.538 1.00 40.90 O
ATOM 17 N3 U B2152 55.074 76.782 96.652 1.00 40.23 N
ATOM 18 C4 U B2152 55.492 75.566 96.177 1.00 39.76 C
ATOM 19 O4 U B2152 55.230 74.551 96.820 1.00 41.43 O
ATOM 20 C5 U B2152 56.137 75.610 94.900 1.00 38.48 C
ATOM 21 C6 U B2152 56.276 76.772 94.271 1.00 37.99 C
ATOM 22 P A B2153 60.403 80.944 92.796 1.00 37.98 P
ATOM 23 OP1 A B2153 60.677 80.726 91.356 1.00 36.94 O
ATOM 24 OP2 A B2153 60.963 80.002 93.791 1.00 37.93 O
ATOM 25 O5' A B2153 60.859 82.419 93.180 1.00 35.67 O
TER
ATOM 2 P A A2153 60.403 80.944 92.796 1.00 37.98 P
ATOM 3 OP1 A A2153 60.677 80.726 91.356 1.00 36.94 O
ATOM 4 OP2 A A2153 60.963 80.002 93.791 1.00 37.93 O
ATOM 5 O5' A A2153 60.859 82.419 93.180 1.00 35.67 O
ATOM 6 C5' A A2153 60.394 83.552 92.424 1.00 34.49 C
ATOM 7 C4' A A2153 60.341 84.771 93.300 1.00 35.32 C
ATOM 8 O4' A A2153 59.316 84.578 94.302 1.00 36.83 O
ATOM 9 C3' A A2153 61.611 85.039 94.088 1.00 37.17 C
ATOM 10 O3' A A2153 62.567 85.757 93.305 1.00 38.87 O
ATOM 11 C2' A A2153 61.084 85.798 95.301 1.00 38.03 C
ATOM 12 O2' A A2153 60.780 87.154 95.056 1.00 41.44 O
ATOM 13 C1' A A2153 59.765 85.071 95.553 1.00 37.23 C
ATOM 14 N9 A A2153 59.898 83.934 96.466 1.00 37.59 N
ATOM 15 C8 A A2153 59.875 82.598 96.148 1.00 37.11 C
ATOM 16 N7 A A2153 60.002 81.809 97.184 1.00 38.09 N
ATOM 17 C5 A A2153 60.123 82.682 98.256 1.00 37.36 C
ATOM 18 C6 A A2153 60.280 82.469 99.630 1.00 37.37 C
ATOM 19 N6 A A2153 60.342 81.257 100.188 1.00 38.49 N
ATOM 20 N1 A A2153 60.367 83.554 100.427 1.00 37.36 N
ATOM 21 C2 A A2153 60.300 84.761 99.870 1.00 36.48 C
ATOM 22 N3 A A2153 60.154 85.089 98.596 1.00 36.82 N
ATOM 23 C4 A A2153 60.067 83.992 97.829 1.00 37.09 C
ATOM 24 P U A2154 64.139 85.409 93.427 1.00 40.33 P
ATOM 25 OP1 U A2154 64.786 85.841 92.161 1.00 36.51 O
ATOM 26 OP2 U A2154 64.314 84.010 93.895 1.00 39.78 O
ATOM 27 O5' U A2154 64.627 86.353 94.608 1.00 38.39 O
TER
ATOM 1 O3' A B2151 56.491 76.460 89.521 1.00 41.37 O
ATOM 2 P U B2152 57.972 76.515 90.164 1.00 43.62 P
ATOM 3 OP1 U B2152 58.914 76.967 89.100 1.00 41.56 O
ATOM 4 OP2 U B2152 58.254 75.247 90.893 1.00 43.72 O
ATOM 5 O5' U B2152 57.857 77.661 91.257 1.00 39.84 O
ATOM 6 C5' U B2152 57.504 78.989 90.879 1.00 38.66 C
ATOM 7 C4' U B2152 57.022 79.740 92.077 1.00 37.67 C
ATOM 8 O4' U B2152 55.978 78.958 92.680 1.00 39.79 O
ATOM 9 C3' U B2152 58.033 79.888 93.197 1.00 38.37 C
ATOM 10 O3' U B2152 58.811 81.049 92.955 1.00 39.09 O
ATOM 11 C2' U B2152 57.136 80.105 94.412 1.00 38.76 C
ATOM 12 O2' U B2152 56.650 81.427 94.513 1.00 38.48 O
ATOM 13 C1' U B2152 55.936 79.226 94.065 1.00 39.58 C
ATOM 14 N1 U B2152 55.815 77.957 94.795 1.00 40.18 N
ATOM 15 C2 U B2152 55.197 77.996 96.032 1.00 40.82 C
ATOM 16 O2 U B2152 54.785 79.032 96.538 1.00 40.90 O
ATOM 17 N3 U B2152 55.074 76.782 96.652 1.00 40.23 N
ATOM 18 C4 U B2152 55.492 75.566 96.177 1.00 39.76 C
ATOM 19 O4 U B2152 55.230 74.551 96.820 1.00 41.43 O
ATOM 20 C5 U B2152 56.137 75.610 94.900 1.00 38.48 C
ATOM 21 C6 U B2152 56.276 76.772 94.271 1.00 37.99 C
ATOM 22 P A B2153 60.403 80.944 92.796 1.00 37.98 P
ATOM 23 OP1 A B2153 60.677 80.726 91.356 1.00 36.94 O
ATOM 24 OP2 A B2153 60.963 80.002 93.791 1.00 37.93 O
ATOM 25 O5' A B2153 60.859 82.419 93.180 1.00 35.67 O
TER
Atoms:
OP1: (60.677,80.726,91.356)
OP2: (60.963,80.002,93.791)
C3': (61.611,85.039,94.088)
C1': (59.765,85.071,95.553)
C5': (60.394,83.552,92.424)
O4': (59.316,84.578,94.302)
C8: (59.875,82.598,96.148)
O2': (60.780,87.154,95.056)
C6: (60.280,82.469,99.630)
C5: (60.123,82.682,98.256)
C4: (60.067,83.992,97.829)
P: (60.403,80.944,92.796)
C4': (60.341,84.771,93.300)
C2': (61.084,85.798,95.301)
C2: (60.300,84.761,99.870)
N1: (60.367,83.554,100.427)
N3: (60.154,85.089,98.596)
N6: (60.342,81.257,100.188)
N7: (60.002,81.809,97.184)
N9: (59.898,83.934,96.466)
O5': (60.859,82.419,93.180)
O3': (62.567,85.757,93.305)
OP2: (60.963,80.002,93.791)
C3': (61.611,85.039,94.088)
C1': (59.765,85.071,95.553)
C5': (60.394,83.552,92.424)
O4': (59.316,84.578,94.302)
C8: (59.875,82.598,96.148)
O2': (60.780,87.154,95.056)
C6: (60.280,82.469,99.630)
C5: (60.123,82.682,98.256)
C4: (60.067,83.992,97.829)
P: (60.403,80.944,92.796)
C4': (60.341,84.771,93.300)
C2': (61.084,85.798,95.301)
C2: (60.300,84.761,99.870)
N1: (60.367,83.554,100.427)
N3: (60.154,85.089,98.596)
N6: (60.342,81.257,100.188)
N7: (60.002,81.809,97.184)
N9: (59.898,83.934,96.466)
O5': (60.859,82.419,93.180)
O3': (62.567,85.757,93.305)
C4: (55.492,75.566,96.177)
N3: (55.074,76.782,96.652)
OP1: (58.914,76.967,89.100)
OP2: (58.254,75.247,90.893)
C2: (55.197,77.996,96.032)
C1': (55.936,79.226,94.065)
C3': (58.033,79.888,93.197)
O5': (57.857,77.661,91.257)
O4': (55.978,78.958,92.680)
C5': (57.504,78.989,90.879)
P: (57.972,76.515,90.164)
C4': (57.022,79.740,92.077)
C2': (57.136,80.105,94.412)
O2': (56.650,81.427,94.513)
N1: (55.815,77.957,94.795)
O4: (55.230,74.551,96.820)
O2: (54.785,79.032,96.538)
C6: (56.276,76.772,94.271)
C5: (56.137,75.610,94.900)
O3': (58.811,81.049,92.955)
N3: (55.074,76.782,96.652)
OP1: (58.914,76.967,89.100)
OP2: (58.254,75.247,90.893)
C2: (55.197,77.996,96.032)
C1': (55.936,79.226,94.065)
C3': (58.033,79.888,93.197)
O5': (57.857,77.661,91.257)
O4': (55.978,78.958,92.680)
C5': (57.504,78.989,90.879)
P: (57.972,76.515,90.164)
C4': (57.022,79.740,92.077)
C2': (57.136,80.105,94.412)
O2': (56.650,81.427,94.513)
N1: (55.815,77.957,94.795)
O4: (55.230,74.551,96.820)
O2: (54.785,79.032,96.538)
C6: (56.276,76.772,94.271)
C5: (56.137,75.610,94.900)
O3': (58.811,81.049,92.955)
Image (generated by PyMOL):