Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:4125:4124
Extra
PDB:
ATOM 1 O3' U A 124 44.794 25.699 164.226 1.00139.21 O
ATOM 2 P A A 125 44.454 24.767 165.480 1.00111.40 P
ATOM 3 OP1 A A 125 43.072 25.113 165.928 1.00112.03 O
ATOM 4 OP2 A A 125 45.591 24.906 166.435 1.00112.34 O
ATOM 5 O5' A A 125 44.444 23.308 164.907 1.00110.20 O
ATOM 6 C5' A A 125 43.918 22.275 165.712 1.00110.51 C
ATOM 7 C4' A A 125 42.968 21.436 164.945 1.00109.47 C
ATOM 8 O4' A A 125 42.086 22.302 164.169 1.00109.16 O
ATOM 9 C3' A A 125 43.643 20.495 163.961 1.00108.14 C
ATOM 10 O3' A A 125 42.955 19.239 163.975 1.00107.66 O
ATOM 11 C2' A A 125 43.492 21.221 162.611 1.00107.21 C
ATOM 12 O2' A A 125 43.487 20.373 161.474 1.00105.84 O
ATOM 13 C1' A A 125 42.166 21.973 162.789 1.00107.75 C
ATOM 14 N9 A A 125 42.057 23.225 162.014 1.00107.59 N
ATOM 15 C8 A A 125 42.909 24.296 162.009 1.00108.02 C
ATOM 16 N7 A A 125 42.525 25.282 161.233 1.00107.78 N
ATOM 17 C5 A A 125 41.329 24.856 160.681 1.00107.15 C
ATOM 18 C6 A A 125 40.415 25.443 159.777 1.00106.66 C
ATOM 19 N6 A A 125 40.511 26.641 159.208 1.00106.69 N
ATOM 20 N1 A A 125 39.332 24.735 159.454 1.00106.13 N
ATOM 21 C2 A A 125 39.174 23.527 159.998 1.00106.10 C
ATOM 22 N3 A A 125 39.948 22.866 160.843 1.00106.51 N
ATOM 23 C4 A A 125 41.028 23.592 161.161 1.00107.04 C
ATOM 24 P U A 126 42.786 18.470 165.381 1.00129.46 P
ATOM 25 OP1 U A 126 41.394 18.723 165.851 1.00130.07 O
ATOM 26 OP2 U A 126 43.920 18.902 166.245 1.00130.39 O
ATOM 27 O5' U A 126 42.963 16.930 164.991 1.00128.49 O
TER
ATOM 1 O3' G B 123 46.543 30.731 160.269 1.00104.93 O
ATOM 2 P U B 124 46.144 30.579 161.795 1.00139.31 P
ATOM 3 OP1 U B 124 44.657 30.534 161.876 1.00139.38 O
ATOM 4 OP2 U B 124 46.878 31.624 162.548 1.00140.54 O
ATOM 5 O5' U B 124 46.748 29.147 162.112 1.00138.88 O
ATOM 6 C5' U B 124 45.905 28.049 162.384 1.00138.60 C
ATOM 7 C4' U B 124 45.705 27.940 163.845 1.00139.91 C
ATOM 8 O4' U B 124 45.378 29.249 164.368 1.00141.05 O
ATOM 9 C3' U B 124 44.556 27.094 164.318 1.00139.97 C
ATOM 10 O3' U B 124 44.794 25.699 164.226 1.00139.21 O
ATOM 11 C2' U B 124 44.401 27.607 165.751 1.00141.57 C
ATOM 12 O2' U B 124 45.461 27.131 166.574 1.00142.10 O
ATOM 13 C1' U B 124 44.621 29.097 165.544 1.00142.11 C
ATOM 14 N1 U B 124 43.356 29.874 165.432 1.00142.43 N
ATOM 15 C2 U B 124 42.094 29.371 165.064 1.00141.88 C
ATOM 16 O2 U B 124 41.798 28.234 164.702 1.00140.99 O
ATOM 17 N3 U B 124 41.105 30.329 165.087 1.00142.44 N
ATOM 18 C4 U B 124 41.196 31.663 165.441 1.00143.46 C
ATOM 19 O4 U B 124 40.193 32.378 165.402 1.00143.86 O
ATOM 20 C5 U B 124 42.506 32.085 165.826 1.00143.99 C
ATOM 21 C6 U B 124 43.497 31.194 165.815 1.00143.47 C
ATOM 22 P A B 125 44.454 24.767 165.480 1.00111.40 P
ATOM 23 OP1 A B 125 43.072 25.113 165.928 1.00112.03 O
ATOM 24 OP2 A B 125 45.591 24.906 166.435 1.00112.34 O
ATOM 25 O5' A B 125 44.444 23.308 164.907 1.00110.20 O
TER
ATOM 2 P A A 125 44.454 24.767 165.480 1.00111.40 P
ATOM 3 OP1 A A 125 43.072 25.113 165.928 1.00112.03 O
ATOM 4 OP2 A A 125 45.591 24.906 166.435 1.00112.34 O
ATOM 5 O5' A A 125 44.444 23.308 164.907 1.00110.20 O
ATOM 6 C5' A A 125 43.918 22.275 165.712 1.00110.51 C
ATOM 7 C4' A A 125 42.968 21.436 164.945 1.00109.47 C
ATOM 8 O4' A A 125 42.086 22.302 164.169 1.00109.16 O
ATOM 9 C3' A A 125 43.643 20.495 163.961 1.00108.14 C
ATOM 10 O3' A A 125 42.955 19.239 163.975 1.00107.66 O
ATOM 11 C2' A A 125 43.492 21.221 162.611 1.00107.21 C
ATOM 12 O2' A A 125 43.487 20.373 161.474 1.00105.84 O
ATOM 13 C1' A A 125 42.166 21.973 162.789 1.00107.75 C
ATOM 14 N9 A A 125 42.057 23.225 162.014 1.00107.59 N
ATOM 15 C8 A A 125 42.909 24.296 162.009 1.00108.02 C
ATOM 16 N7 A A 125 42.525 25.282 161.233 1.00107.78 N
ATOM 17 C5 A A 125 41.329 24.856 160.681 1.00107.15 C
ATOM 18 C6 A A 125 40.415 25.443 159.777 1.00106.66 C
ATOM 19 N6 A A 125 40.511 26.641 159.208 1.00106.69 N
ATOM 20 N1 A A 125 39.332 24.735 159.454 1.00106.13 N
ATOM 21 C2 A A 125 39.174 23.527 159.998 1.00106.10 C
ATOM 22 N3 A A 125 39.948 22.866 160.843 1.00106.51 N
ATOM 23 C4 A A 125 41.028 23.592 161.161 1.00107.04 C
ATOM 24 P U A 126 42.786 18.470 165.381 1.00129.46 P
ATOM 25 OP1 U A 126 41.394 18.723 165.851 1.00130.07 O
ATOM 26 OP2 U A 126 43.920 18.902 166.245 1.00130.39 O
ATOM 27 O5' U A 126 42.963 16.930 164.991 1.00128.49 O
TER
ATOM 1 O3' G B 123 46.543 30.731 160.269 1.00104.93 O
ATOM 2 P U B 124 46.144 30.579 161.795 1.00139.31 P
ATOM 3 OP1 U B 124 44.657 30.534 161.876 1.00139.38 O
ATOM 4 OP2 U B 124 46.878 31.624 162.548 1.00140.54 O
ATOM 5 O5' U B 124 46.748 29.147 162.112 1.00138.88 O
ATOM 6 C5' U B 124 45.905 28.049 162.384 1.00138.60 C
ATOM 7 C4' U B 124 45.705 27.940 163.845 1.00139.91 C
ATOM 8 O4' U B 124 45.378 29.249 164.368 1.00141.05 O
ATOM 9 C3' U B 124 44.556 27.094 164.318 1.00139.97 C
ATOM 10 O3' U B 124 44.794 25.699 164.226 1.00139.21 O
ATOM 11 C2' U B 124 44.401 27.607 165.751 1.00141.57 C
ATOM 12 O2' U B 124 45.461 27.131 166.574 1.00142.10 O
ATOM 13 C1' U B 124 44.621 29.097 165.544 1.00142.11 C
ATOM 14 N1 U B 124 43.356 29.874 165.432 1.00142.43 N
ATOM 15 C2 U B 124 42.094 29.371 165.064 1.00141.88 C
ATOM 16 O2 U B 124 41.798 28.234 164.702 1.00140.99 O
ATOM 17 N3 U B 124 41.105 30.329 165.087 1.00142.44 N
ATOM 18 C4 U B 124 41.196 31.663 165.441 1.00143.46 C
ATOM 19 O4 U B 124 40.193 32.378 165.402 1.00143.86 O
ATOM 20 C5 U B 124 42.506 32.085 165.826 1.00143.99 C
ATOM 21 C6 U B 124 43.497 31.194 165.815 1.00143.47 C
ATOM 22 P A B 125 44.454 24.767 165.480 1.00111.40 P
ATOM 23 OP1 A B 125 43.072 25.113 165.928 1.00112.03 O
ATOM 24 OP2 A B 125 45.591 24.906 166.435 1.00112.34 O
ATOM 25 O5' A B 125 44.444 23.308 164.907 1.00110.20 O
TER
Atoms:
OP1: (43.072,25.113,165.928)
OP2: (45.591,24.906,166.435)
C3': (43.643,20.495,163.961)
C1': (42.166,21.973,162.789)
C5': (43.918,22.275,165.712)
O4': (42.086,22.302,164.169)
C8: (42.909,24.296,162.009)
O2': (43.487,20.373,161.474)
C6: (40.415,25.443,159.777)
C5: (41.329,24.856,160.681)
C4: (41.028,23.592,161.161)
P: (44.454,24.767,165.480)
C4': (42.968,21.436,164.945)
C2': (43.492,21.221,162.611)
C2: (39.174,23.527,159.998)
N1: (39.332,24.735,159.454)
N3: (39.948,22.866,160.843)
N6: (40.511,26.641,159.208)
N7: (42.525,25.282,161.233)
N9: (42.057,23.225,162.014)
O5': (44.444,23.308,164.907)
O3': (42.955,19.239,163.975)
OP2: (45.591,24.906,166.435)
C3': (43.643,20.495,163.961)
C1': (42.166,21.973,162.789)
C5': (43.918,22.275,165.712)
O4': (42.086,22.302,164.169)
C8: (42.909,24.296,162.009)
O2': (43.487,20.373,161.474)
C6: (40.415,25.443,159.777)
C5: (41.329,24.856,160.681)
C4: (41.028,23.592,161.161)
P: (44.454,24.767,165.480)
C4': (42.968,21.436,164.945)
C2': (43.492,21.221,162.611)
C2: (39.174,23.527,159.998)
N1: (39.332,24.735,159.454)
N3: (39.948,22.866,160.843)
N6: (40.511,26.641,159.208)
N7: (42.525,25.282,161.233)
N9: (42.057,23.225,162.014)
O5': (44.444,23.308,164.907)
O3': (42.955,19.239,163.975)
C4: (41.196,31.663,165.441)
N3: (41.105,30.329,165.087)
OP1: (44.657,30.534,161.876)
OP2: (46.878,31.624,162.548)
C2: (42.094,29.371,165.064)
C1': (44.621,29.097,165.544)
C3': (44.556,27.094,164.318)
O5': (46.748,29.147,162.112)
O4': (45.378,29.249,164.368)
C5': (45.905,28.049,162.384)
P: (46.144,30.579,161.795)
C4': (45.705,27.940,163.845)
C2': (44.401,27.607,165.751)
O2': (45.461,27.131,166.574)
N1: (43.356,29.874,165.432)
O4: (40.193,32.378,165.402)
O2: (41.798,28.234,164.702)
C6: (43.497,31.194,165.815)
C5: (42.506,32.085,165.826)
O3': (44.794,25.699,164.226)
N3: (41.105,30.329,165.087)
OP1: (44.657,30.534,161.876)
OP2: (46.878,31.624,162.548)
C2: (42.094,29.371,165.064)
C1': (44.621,29.097,165.544)
C3': (44.556,27.094,164.318)
O5': (46.748,29.147,162.112)
O4': (45.378,29.249,164.368)
C5': (45.905,28.049,162.384)
P: (46.144,30.579,161.795)
C4': (45.705,27.940,163.845)
C2': (44.401,27.607,165.751)
O2': (45.461,27.131,166.574)
N1: (43.356,29.874,165.432)
O4: (40.193,32.378,165.402)
O2: (41.798,28.234,164.702)
C6: (43.497,31.194,165.815)
C5: (42.506,32.085,165.826)
O3': (44.794,25.699,164.226)
Image (generated by PyMOL):