Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CGQ:B7:B6
Extra
PDB:
ATOM 1 O3' U A 6 -14.391 -39.237 16.172 1.00 8.65 O
ATOM 2 P A A 7 -14.882 -39.985 17.492 1.00 7.61 P
ATOM 3 OP1 A A 7 -13.677 -40.294 18.289 1.00 12.71 O
ATOM 4 OP2 A A 7 -15.816 -41.081 17.125 1.00 10.79 O
ATOM 5 O5' A A 7 -15.671 -38.819 18.232 1.00 10.65 O
ATOM 6 C5' A A 7 -16.776 -39.065 19.090 1.00 9.48 C
ATOM 7 C4' A A 7 -17.463 -37.760 19.381 1.00 10.82 C
ATOM 8 O4' A A 7 -16.459 -36.829 19.867 1.00 11.03 O
ATOM 9 C3' A A 7 -18.016 -37.080 18.136 1.00 12.15 C
ATOM 10 O3' A A 7 -19.348 -37.498 17.874 1.00 14.55 O
ATOM 11 C2' A A 7 -18.002 -35.611 18.525 1.00 12.52 C
ATOM 12 O2' A A 7 -19.092 -35.256 19.347 1.00 11.60 O
ATOM 13 C1' A A 7 -16.722 -35.534 19.352 1.00 14.27 C
ATOM 14 N9 A A 7 -15.574 -35.086 18.566 1.00 14.50 N
ATOM 15 C8 A A 7 -14.670 -35.821 17.832 1.00 14.61 C
ATOM 16 N7 A A 7 -13.727 -35.098 17.280 1.00 12.15 N
ATOM 17 C5 A A 7 -14.033 -33.799 17.670 1.00 14.64 C
ATOM 18 C6 A A 7 -13.404 -32.566 17.430 1.00 14.13 C
ATOM 19 N6 A A 7 -12.274 -32.443 16.734 1.00 15.10 N
ATOM 20 N1 A A 7 -13.978 -31.454 17.946 1.00 14.08 N
ATOM 21 C2 A A 7 -15.104 -31.587 18.668 1.00 15.58 C
ATOM 22 N3 A A 7 -15.779 -32.692 18.976 1.00 17.21 N
ATOM 23 C4 A A 7 -15.181 -33.777 18.441 1.00 15.85 C
ATOM 24 P A A 8 -19.688 -38.233 16.493 1.00 12.67 P
ATOM 25 OP1 A A 8 -18.797 -37.660 15.459 1.00 13.46 O
ATOM 26 OP2 A A 8 -21.156 -38.164 16.305 1.00 14.39 O
ATOM 27 O5' A A 8 -19.282 -39.746 16.805 1.00 14.92 O
TER
ATOM 1 O3' C B 5 -8.470 -39.911 14.694 1.00 14.54 O
ATOM 2 P U B 6 -9.577 -40.332 15.783 1.00 16.35 P
ATOM 3 OP1 U B 6 -9.571 -39.327 16.874 1.00 17.69 O
ATOM 4 OP2 U B 6 -9.393 -41.760 16.110 1.00 19.44 O
ATOM 5 O5' U B 6 -10.959 -40.189 15.010 1.00 16.60 O
ATOM 6 C5' U B 6 -11.553 -38.914 14.788 1.00 13.49 C
ATOM 7 C4' U B 6 -12.957 -39.088 14.261 1.00 12.96 C
ATOM 8 O4' U B 6 -12.930 -39.756 12.972 1.00 12.50 O
ATOM 9 C3' U B 6 -13.859 -39.979 15.097 1.00 10.60 C
ATOM 10 O3' U B 6 -14.391 -39.237 16.172 1.00 8.65 O
ATOM 11 C2' U B 6 -14.937 -40.352 14.089 1.00 11.02 C
ATOM 12 O2' U B 6 -15.867 -39.302 13.865 1.00 9.84 O
ATOM 13 C1' U B 6 -14.092 -40.564 12.834 1.00 12.68 C
ATOM 14 N1 U B 6 -13.659 -41.957 12.678 1.00 13.99 N
ATOM 15 C2 U B 6 -14.541 -42.850 12.090 1.00 15.60 C
ATOM 16 O2 U B 6 -15.678 -42.545 11.749 1.00 15.74 O
ATOM 17 N3 U B 6 -14.045 -44.119 11.927 1.00 17.04 N
ATOM 18 C4 U B 6 -12.799 -44.580 12.302 1.00 15.74 C
ATOM 19 O4 U B 6 -12.485 -45.741 12.045 1.00 17.82 O
ATOM 20 C5 U B 6 -11.963 -43.604 12.935 1.00 13.62 C
ATOM 21 C6 U B 6 -12.408 -42.358 13.093 1.00 12.84 C
ATOM 22 P A B 7 -14.882 -39.985 17.492 1.00 7.61 P
ATOM 23 OP1 A B 7 -13.677 -40.294 18.289 1.00 12.71 O
ATOM 24 OP2 A B 7 -15.816 -41.081 17.125 1.00 10.79 O
ATOM 25 O5' A B 7 -15.671 -38.819 18.232 1.00 10.65 O
TER
ATOM 2 P A A 7 -14.882 -39.985 17.492 1.00 7.61 P
ATOM 3 OP1 A A 7 -13.677 -40.294 18.289 1.00 12.71 O
ATOM 4 OP2 A A 7 -15.816 -41.081 17.125 1.00 10.79 O
ATOM 5 O5' A A 7 -15.671 -38.819 18.232 1.00 10.65 O
ATOM 6 C5' A A 7 -16.776 -39.065 19.090 1.00 9.48 C
ATOM 7 C4' A A 7 -17.463 -37.760 19.381 1.00 10.82 C
ATOM 8 O4' A A 7 -16.459 -36.829 19.867 1.00 11.03 O
ATOM 9 C3' A A 7 -18.016 -37.080 18.136 1.00 12.15 C
ATOM 10 O3' A A 7 -19.348 -37.498 17.874 1.00 14.55 O
ATOM 11 C2' A A 7 -18.002 -35.611 18.525 1.00 12.52 C
ATOM 12 O2' A A 7 -19.092 -35.256 19.347 1.00 11.60 O
ATOM 13 C1' A A 7 -16.722 -35.534 19.352 1.00 14.27 C
ATOM 14 N9 A A 7 -15.574 -35.086 18.566 1.00 14.50 N
ATOM 15 C8 A A 7 -14.670 -35.821 17.832 1.00 14.61 C
ATOM 16 N7 A A 7 -13.727 -35.098 17.280 1.00 12.15 N
ATOM 17 C5 A A 7 -14.033 -33.799 17.670 1.00 14.64 C
ATOM 18 C6 A A 7 -13.404 -32.566 17.430 1.00 14.13 C
ATOM 19 N6 A A 7 -12.274 -32.443 16.734 1.00 15.10 N
ATOM 20 N1 A A 7 -13.978 -31.454 17.946 1.00 14.08 N
ATOM 21 C2 A A 7 -15.104 -31.587 18.668 1.00 15.58 C
ATOM 22 N3 A A 7 -15.779 -32.692 18.976 1.00 17.21 N
ATOM 23 C4 A A 7 -15.181 -33.777 18.441 1.00 15.85 C
ATOM 24 P A A 8 -19.688 -38.233 16.493 1.00 12.67 P
ATOM 25 OP1 A A 8 -18.797 -37.660 15.459 1.00 13.46 O
ATOM 26 OP2 A A 8 -21.156 -38.164 16.305 1.00 14.39 O
ATOM 27 O5' A A 8 -19.282 -39.746 16.805 1.00 14.92 O
TER
ATOM 1 O3' C B 5 -8.470 -39.911 14.694 1.00 14.54 O
ATOM 2 P U B 6 -9.577 -40.332 15.783 1.00 16.35 P
ATOM 3 OP1 U B 6 -9.571 -39.327 16.874 1.00 17.69 O
ATOM 4 OP2 U B 6 -9.393 -41.760 16.110 1.00 19.44 O
ATOM 5 O5' U B 6 -10.959 -40.189 15.010 1.00 16.60 O
ATOM 6 C5' U B 6 -11.553 -38.914 14.788 1.00 13.49 C
ATOM 7 C4' U B 6 -12.957 -39.088 14.261 1.00 12.96 C
ATOM 8 O4' U B 6 -12.930 -39.756 12.972 1.00 12.50 O
ATOM 9 C3' U B 6 -13.859 -39.979 15.097 1.00 10.60 C
ATOM 10 O3' U B 6 -14.391 -39.237 16.172 1.00 8.65 O
ATOM 11 C2' U B 6 -14.937 -40.352 14.089 1.00 11.02 C
ATOM 12 O2' U B 6 -15.867 -39.302 13.865 1.00 9.84 O
ATOM 13 C1' U B 6 -14.092 -40.564 12.834 1.00 12.68 C
ATOM 14 N1 U B 6 -13.659 -41.957 12.678 1.00 13.99 N
ATOM 15 C2 U B 6 -14.541 -42.850 12.090 1.00 15.60 C
ATOM 16 O2 U B 6 -15.678 -42.545 11.749 1.00 15.74 O
ATOM 17 N3 U B 6 -14.045 -44.119 11.927 1.00 17.04 N
ATOM 18 C4 U B 6 -12.799 -44.580 12.302 1.00 15.74 C
ATOM 19 O4 U B 6 -12.485 -45.741 12.045 1.00 17.82 O
ATOM 20 C5 U B 6 -11.963 -43.604 12.935 1.00 13.62 C
ATOM 21 C6 U B 6 -12.408 -42.358 13.093 1.00 12.84 C
ATOM 22 P A B 7 -14.882 -39.985 17.492 1.00 7.61 P
ATOM 23 OP1 A B 7 -13.677 -40.294 18.289 1.00 12.71 O
ATOM 24 OP2 A B 7 -15.816 -41.081 17.125 1.00 10.79 O
ATOM 25 O5' A B 7 -15.671 -38.819 18.232 1.00 10.65 O
TER
Atoms:
OP1: (-13.677,-40.294,18.289)
OP2: (-15.816,-41.081,17.125)
C3': (-18.016,-37.080,18.136)
C1': (-16.722,-35.534,19.352)
C5': (-16.776,-39.065,19.090)
O4': (-16.459,-36.829,19.867)
C8: (-14.670,-35.821,17.832)
O2': (-19.092,-35.256,19.347)
C6: (-13.404,-32.566,17.430)
C5: (-14.033,-33.799,17.670)
C4: (-15.181,-33.777,18.441)
P: (-14.882,-39.985,17.492)
C4': (-17.463,-37.760,19.381)
C2': (-18.002,-35.611,18.525)
C2: (-15.104,-31.587,18.668)
N1: (-13.978,-31.454,17.946)
N3: (-15.779,-32.692,18.976)
N6: (-12.274,-32.443,16.734)
N7: (-13.727,-35.098,17.280)
N9: (-15.574,-35.086,18.566)
O5': (-15.671,-38.819,18.232)
O3': (-19.348,-37.498,17.874)
OP2: (-15.816,-41.081,17.125)
C3': (-18.016,-37.080,18.136)
C1': (-16.722,-35.534,19.352)
C5': (-16.776,-39.065,19.090)
O4': (-16.459,-36.829,19.867)
C8: (-14.670,-35.821,17.832)
O2': (-19.092,-35.256,19.347)
C6: (-13.404,-32.566,17.430)
C5: (-14.033,-33.799,17.670)
C4: (-15.181,-33.777,18.441)
P: (-14.882,-39.985,17.492)
C4': (-17.463,-37.760,19.381)
C2': (-18.002,-35.611,18.525)
C2: (-15.104,-31.587,18.668)
N1: (-13.978,-31.454,17.946)
N3: (-15.779,-32.692,18.976)
N6: (-12.274,-32.443,16.734)
N7: (-13.727,-35.098,17.280)
N9: (-15.574,-35.086,18.566)
O5': (-15.671,-38.819,18.232)
O3': (-19.348,-37.498,17.874)
C4: (-12.799,-44.580,12.302)
N3: (-14.045,-44.119,11.927)
OP1: (-9.571,-39.327,16.874)
OP2: (-9.393,-41.760,16.110)
C2: (-14.541,-42.850,12.090)
C1': (-14.092,-40.564,12.834)
C3': (-13.859,-39.979,15.097)
O5': (-10.959,-40.189,15.010)
O4': (-12.930,-39.756,12.972)
C5': (-11.553,-38.914,14.788)
P: (-9.577,-40.332,15.783)
C4': (-12.957,-39.088,14.261)
C2': (-14.937,-40.352,14.089)
O2': (-15.867,-39.302,13.865)
N1: (-13.659,-41.957,12.678)
O4: (-12.485,-45.741,12.045)
O2: (-15.678,-42.545,11.749)
C6: (-12.408,-42.358,13.093)
C5: (-11.963,-43.604,12.935)
O3': (-14.391,-39.237,16.172)
N3: (-14.045,-44.119,11.927)
OP1: (-9.571,-39.327,16.874)
OP2: (-9.393,-41.760,16.110)
C2: (-14.541,-42.850,12.090)
C1': (-14.092,-40.564,12.834)
C3': (-13.859,-39.979,15.097)
O5': (-10.959,-40.189,15.010)
O4': (-12.930,-39.756,12.972)
C5': (-11.553,-38.914,14.788)
P: (-9.577,-40.332,15.783)
C4': (-12.957,-39.088,14.261)
C2': (-14.937,-40.352,14.089)
O2': (-15.867,-39.302,13.865)
N1: (-13.659,-41.957,12.678)
O4: (-12.485,-45.741,12.045)
O2: (-15.678,-42.545,11.749)
C6: (-12.408,-42.358,13.093)
C5: (-11.963,-43.604,12.935)
O3': (-14.391,-39.237,16.172)
Image (generated by PyMOL):