ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SUH:X9:X8

Extra

PDB:
ATOM 1 O3' U A 8 -18.155 35.758 52.788 1.00 40.97 O
ATOM 2 P A A 9 -16.666 35.583 53.335 1.00 38.22 P
ATOM 3 OP1 A A 9 -15.901 34.756 52.377 1.00 33.96 O
ATOM 4 OP2 A A 9 -16.790 35.215 54.760 1.00 38.93 O
ATOM 5 O5' A A 9 -16.082 37.065 53.227 1.00 37.89 O
ATOM 6 C5' A A 9 -15.779 37.610 51.940 1.00 36.25 C
ATOM 7 C4' A A 9 -15.782 39.120 52.020 1.00 35.00 C
ATOM 8 O4' A A 9 -17.157 39.562 52.158 1.00 35.66 O
ATOM 9 C3' A A 9 -15.116 39.634 53.282 1.00 35.33 C
ATOM 10 O3' A A 9 -13.716 39.766 53.091 1.00 33.26 O
ATOM 11 C2' A A 9 -15.816 40.971 53.473 1.00 35.29 C
ATOM 12 O2' A A 9 -15.320 41.960 52.593 1.00 39.57 O
ATOM 13 C1' A A 9 -17.251 40.602 53.111 1.00 34.75 C
ATOM 14 N9 A A 9 -17.957 40.076 54.263 1.00 33.81 N
ATOM 15 C8 A A 9 -18.516 38.836 54.385 1.00 35.53 C
ATOM 16 N7 A A 9 -19.032 38.609 55.571 1.00 36.13 N
ATOM 17 C5 A A 9 -18.763 39.770 56.274 1.00 33.41 C
ATOM 18 C6 A A 9 -19.029 40.153 57.596 1.00 33.90 C
ATOM 19 N6 A A 9 -19.662 39.359 58.453 1.00 34.78 N
ATOM 20 N1 A A 9 -18.624 41.377 57.999 1.00 35.35 N
ATOM 21 C2 A A 9 -18.000 42.171 57.118 1.00 34.94 C
ATOM 22 N3 A A 9 -17.694 41.915 55.844 1.00 34.93 N
ATOM 23 C4 A A 9 -18.105 40.687 55.483 1.00 33.99 C
ATOM 24 P G A 10 -12.752 39.588 54.354 1.00 34.51 P
ATOM 25 OP1 G A 10 -11.352 39.858 53.938 1.00 30.17 O
ATOM 26 OP2 G A 10 -13.097 38.292 54.978 1.00 36.41 O
ATOM 27 O5' G A 10 -13.277 40.703 55.370 1.00 33.09 O
TER

ATOM 1 O3' G B 7 -20.237 30.952 48.497 1.00 40.51 O
ATOM 2 P U B 8 -19.780 30.965 50.031 1.00 40.72 P
ATOM 3 OP1 U B 8 -18.400 30.429 50.095 1.00 40.87 O
ATOM 4 OP2 U B 8 -20.867 30.357 50.823 1.00 40.91 O
ATOM 5 O5' U B 8 -19.751 32.508 50.448 1.00 41.64 O
ATOM 6 C5' U B 8 -18.666 33.352 50.126 1.00 39.96 C
ATOM 7 C4' U B 8 -18.911 34.695 50.769 1.00 40.57 C
ATOM 8 O4' U B 8 -20.236 35.154 50.400 1.00 41.82 O
ATOM 9 C3' U B 8 -18.894 34.651 52.294 1.00 42.25 C
ATOM 10 O3' U B 8 -18.155 35.758 52.788 1.00 40.97 O
ATOM 11 C2' U B 8 -20.370 34.783 52.665 1.00 43.38 C
ATOM 12 O2' U B 8 -20.565 35.443 53.896 1.00 47.27 O
ATOM 13 C1' U B 8 -20.848 35.695 51.554 1.00 44.97 C
ATOM 14 N1 U B 8 -22.337 35.744 51.444 1.00 47.83 N
ATOM 15 C2 U B 8 -23.009 36.855 51.918 1.00 50.32 C
ATOM 16 O2 U B 8 -22.443 37.823 52.392 1.00 51.00 O
ATOM 17 N3 U B 8 -24.381 36.807 51.808 1.00 51.36 N
ATOM 18 C4 U B 8 -25.135 35.767 51.287 1.00 51.49 C
ATOM 19 O4 U B 8 -26.361 35.857 51.249 1.00 49.96 O
ATOM 20 C5 U B 8 -24.365 34.637 50.828 1.00 50.60 C
ATOM 21 C6 U B 8 -23.028 34.665 50.926 1.00 49.42 C
ATOM 22 P A B 9 -16.666 35.583 53.335 1.00 38.22 P
ATOM 23 OP1 A B 9 -15.901 34.756 52.377 1.00 33.96 O
ATOM 24 OP2 A B 9 -16.790 35.215 54.760 1.00 38.93 O
ATOM 25 O5' A B 9 -16.082 37.065 53.227 1.00 37.89 O
TER

Atoms:
OP1: (-15.901,34.756,52.377)
OP2: (-16.790,35.215,54.760)
C3': (-15.116,39.634,53.282)
C1': (-17.251,40.602,53.111)
C5': (-15.779,37.610,51.940)
O4': (-17.157,39.562,52.158)
C8: (-18.516,38.836,54.385)
O2': (-15.320,41.960,52.593)
C6: (-19.029,40.153,57.596)
C5: (-18.763,39.770,56.274)
C4: (-18.105,40.687,55.483)
P: (-16.666,35.583,53.335)
C4': (-15.782,39.120,52.020)
C2': (-15.816,40.971,53.473)
C2: (-18.000,42.171,57.118)
N1: (-18.624,41.377,57.999)
N3: (-17.694,41.915,55.844)
N6: (-19.662,39.359,58.453)
N7: (-19.032,38.609,55.571)
N9: (-17.957,40.076,54.263)
O5': (-16.082,37.065,53.227)
O3': (-13.716,39.766,53.091)
C4: (-25.135,35.767,51.287)
N3: (-24.381,36.807,51.808)
OP1: (-18.400,30.429,50.095)
OP2: (-20.867,30.357,50.823)
C2: (-23.009,36.855,51.918)
C1': (-20.848,35.695,51.554)
C3': (-18.894,34.651,52.294)
O5': (-19.751,32.508,50.448)
O4': (-20.236,35.154,50.400)
C5': (-18.666,33.352,50.126)
P: (-19.780,30.965,50.031)
C4': (-18.911,34.695,50.769)
C2': (-20.370,34.783,52.665)
O2': (-20.565,35.443,53.896)
N1: (-22.337,35.744,51.444)
O4: (-26.361,35.857,51.249)
O2: (-22.443,37.823,52.392)
C6: (-23.028,34.665,50.926)
C5: (-24.365,34.637,50.828)
O3': (-18.155,35.758,52.788)
Image (generated by PyMOL):
PyMOL image
show in jmol