ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZZM:B24:B12

Extra

PDB:
ATOM 1 O3' A A 23 19.503 -34.866 -25.874 1.00 32.95 O
ATOM 2 P A A 24 20.114 -33.418 -25.563 1.00 43.88 P
ATOM 3 OP1 A A 24 21.543 -33.363 -26.001 1.00 52.35 O
ATOM 4 OP2 A A 24 19.765 -33.054 -24.160 1.00 33.81 O
ATOM 5 O5' A A 24 19.284 -32.501 -26.567 1.00 43.59 O
ATOM 6 C5' A A 24 19.109 -32.895 -27.928 1.00 38.77 C
ATOM 7 C4' A A 24 18.041 -32.054 -28.581 1.00 46.94 C
ATOM 8 O4' A A 24 16.743 -32.376 -28.034 1.00 45.69 O
ATOM 9 C3' A A 24 18.161 -30.577 -28.291 1.00 54.74 C
ATOM 10 O3' A A 24 19.155 -30.013 -29.117 1.00 61.68 O
ATOM 11 C2' A A 24 16.756 -30.075 -28.589 1.00 46.28 C
ATOM 12 O2' A A 24 16.503 -29.940 -29.978 1.00 41.33 O
ATOM 13 C1' A A 24 15.921 -31.219 -28.018 1.00 42.06 C
ATOM 14 N9 A A 24 15.452 -31.036 -26.643 1.00 42.25 N
ATOM 15 C8 A A 24 15.932 -31.685 -25.539 1.00 35.27 C
ATOM 16 N7 A A 24 15.316 -31.369 -24.427 1.00 31.66 N
ATOM 17 C5 A A 24 14.375 -30.434 -24.818 1.00 44.74 C
ATOM 18 C6 A A 24 13.417 -29.697 -24.094 1.00 56.27 C
ATOM 19 N6 A A 24 13.268 -29.777 -22.769 1.00 51.34 N
ATOM 20 N1 A A 24 12.618 -28.855 -24.788 1.00 57.41 N
ATOM 21 C2 A A 24 12.795 -28.753 -26.113 1.00 44.53 C
ATOM 22 N3 A A 24 13.672 -29.377 -26.899 1.00 42.56 N
ATOM 23 C4 A A 24 14.441 -30.217 -26.184 1.00 43.78 C
ATOM 24 P G A 25 19.821 -28.632 -28.690 1.00 43.93 P
ATOM 25 OP1 G A 25 20.853 -28.254 -29.689 1.00 42.54 O
ATOM 26 OP2 G A 25 20.188 -28.741 -27.263 1.00 41.61 O
ATOM 27 O5' G A 25 18.592 -27.636 -28.812 1.00 54.43 O
TER

ATOM 1 O3' C B 11 10.159 -26.576 -14.958 1.00 38.72 O
ATOM 2 P A B 12 9.237 -27.849 -15.135 1.00 56.93 P
ATOM 3 OP1 A B 12 7.844 -27.363 -14.963 1.00 73.01 O
ATOM 4 OP2 A B 12 9.784 -28.912 -14.237 1.00 48.53 O
ATOM 5 O5' A B 12 9.439 -28.239 -16.660 1.00 45.78 O
ATOM 6 C5' A B 12 9.152 -27.290 -17.675 1.00 50.69 C
ATOM 7 C4' A B 12 9.756 -27.728 -18.979 1.00 57.16 C
ATOM 8 O4' A B 12 11.199 -27.728 -18.873 1.00 66.18 O
ATOM 9 C3' A B 12 9.408 -29.139 -19.423 1.00 62.81 C
ATOM 10 O3' A B 12 8.149 -29.085 -20.085 1.00 59.90 O
ATOM 11 C2' A B 12 10.565 -29.457 -20.364 1.00 57.73 C
ATOM 12 O2' A B 12 10.420 -28.812 -21.620 1.00 46.92 O
ATOM 13 C1' A B 12 11.732 -28.808 -19.618 1.00 55.46 C
ATOM 14 N9 A B 12 12.437 -29.679 -18.680 1.00 52.49 N
ATOM 15 C8 A B 12 12.252 -29.778 -17.324 1.00 41.90 C
ATOM 16 N7 A B 12 13.072 -30.617 -16.740 1.00 46.81 N
ATOM 17 C5 A B 12 13.849 -31.105 -17.783 1.00 42.70 C
ATOM 18 C6 A B 12 14.908 -32.033 -17.829 1.00 46.41 C
ATOM 19 N6 A B 12 15.446 -32.613 -16.750 1.00 45.22 N
ATOM 20 N1 A B 12 15.414 -32.342 -19.038 1.00 37.03 N
ATOM 21 C2 A B 12 14.918 -31.725 -20.114 1.00 44.73 C
ATOM 22 N3 A B 12 13.958 -30.813 -20.198 1.00 40.59 N
ATOM 23 C4 A B 12 13.453 -30.550 -18.985 1.00 43.04 C
ATOM 24 P A B 13 7.472 -30.424 -20.640 1.00 57.27 P
ATOM 25 OP1 A B 13 6.096 -30.003 -20.980 1.00 54.81 O
ATOM 26 OP2 A B 13 7.703 -31.582 -19.705 1.00 44.64 O
ATOM 27 O5' A B 13 8.242 -30.665 -22.007 1.00 43.06 O
TER

Atoms:
OP1: (21.543,-33.363,-26.001)
OP2: (19.765,-33.054,-24.160)
C3': (18.161,-30.577,-28.291)
C1': (15.921,-31.219,-28.018)
C5': (19.109,-32.895,-27.928)
O4': (16.743,-32.376,-28.034)
C8: (15.932,-31.685,-25.539)
O2': (16.503,-29.940,-29.978)
C6: (13.417,-29.697,-24.094)
C5: (14.375,-30.434,-24.818)
C4: (14.441,-30.217,-26.184)
P: (20.114,-33.418,-25.563)
C4': (18.041,-32.054,-28.581)
C2': (16.756,-30.075,-28.589)
C2: (12.795,-28.753,-26.113)
N1: (12.618,-28.855,-24.788)
N3: (13.672,-29.377,-26.899)
N6: (13.268,-29.777,-22.769)
N7: (15.316,-31.369,-24.427)
N9: (15.452,-31.036,-26.643)
O5': (19.284,-32.501,-26.567)
O3': (19.155,-30.013,-29.117)
OP1: (7.844,-27.363,-14.963)
OP2: (9.784,-28.912,-14.237)
C3': (9.408,-29.139,-19.423)
C1': (11.732,-28.808,-19.618)
C5': (9.152,-27.290,-17.675)
O4': (11.199,-27.728,-18.873)
C8: (12.252,-29.778,-17.324)
O2': (10.420,-28.812,-21.620)
C6: (14.908,-32.033,-17.829)
C5: (13.849,-31.105,-17.783)
C4: (13.453,-30.550,-18.985)
P: (9.237,-27.849,-15.135)
C4': (9.756,-27.728,-18.979)
C2': (10.565,-29.457,-20.364)
C2: (14.918,-31.725,-20.114)
N1: (15.414,-32.342,-19.038)
N3: (13.958,-30.813,-20.198)
N6: (15.446,-32.613,-16.750)
N7: (13.072,-30.617,-16.740)
N9: (12.437,-29.679,-18.680)
O5': (9.439,-28.239,-16.660)
O3': (8.149,-29.085,-20.085)
Image (generated by PyMOL):
PyMOL image
show in jmol