Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1494:1493
Extra
PDB:
ATOM 1 O3' U A 493 40.816 11.054 -36.442 1.00207.03 O
ATOM 2 P A A 494 41.470 9.670 -35.949 1.00189.20 P
ATOM 3 OP1 A A 494 42.335 9.985 -34.786 1.00188.42 O
ATOM 4 OP2 A A 494 42.080 9.030 -37.142 1.00189.86 O
ATOM 5 O5' A A 494 40.211 8.830 -35.475 1.00188.95 O
ATOM 6 C5' A A 494 39.000 9.476 -35.146 1.00188.90 C
ATOM 7 C4' A A 494 37.976 9.308 -36.235 1.00189.69 C
ATOM 8 O4' A A 494 38.389 10.014 -37.432 1.00190.47 O
ATOM 9 C3' A A 494 37.743 7.893 -36.731 1.00189.92 C
ATOM 10 O3' A A 494 36.964 7.110 -35.834 1.00189.38 O
ATOM 11 C2' A A 494 37.074 8.142 -38.082 1.00190.89 C
ATOM 12 O2' A A 494 35.692 8.431 -37.923 1.00190.96 O
ATOM 13 C1' A A 494 37.779 9.410 -38.555 1.00191.22 C
ATOM 14 N9 A A 494 38.793 9.126 -39.586 1.00191.77 N
ATOM 15 C8 A A 494 40.143 9.370 -39.634 1.00191.69 C
ATOM 16 N7 A A 494 40.713 8.983 -40.749 1.00192.34 N
ATOM 17 C5 A A 494 39.665 8.439 -41.483 1.00192.89 C
ATOM 18 C6 A A 494 39.598 7.847 -42.757 1.00193.72 C
ATOM 19 N6 A A 494 40.664 7.719 -43.552 1.00194.15 N
ATOM 20 N1 A A 494 38.389 7.408 -43.196 1.00194.12 N
ATOM 21 C2 A A 494 37.317 7.553 -42.404 1.00193.70 C
ATOM 22 N3 A A 494 37.258 8.096 -41.191 1.00192.93 N
ATOM 23 C4 A A 494 38.476 8.522 -40.782 1.00192.55 C
ATOM 24 P A A 495 36.498 5.619 -36.232 1.00194.12 P
ATOM 25 OP1 A A 495 35.627 5.128 -35.137 1.00193.49 O
ATOM 26 OP2 A A 495 37.724 4.852 -36.569 1.00194.17 O
ATOM 27 O5' A A 495 35.631 5.860 -37.544 1.00195.08 O
TER
ATOM 1 O3' G B 492 46.926 13.735 -38.613 1.00230.30 O
ATOM 2 P U B 493 46.185 12.522 -37.835 1.00207.63 P
ATOM 3 OP1 U B 493 46.965 12.259 -36.601 1.00206.77 O
ATOM 4 OP2 U B 493 46.014 11.420 -38.813 1.00208.18 O
ATOM 5 O5' U B 493 44.753 13.131 -37.450 1.00207.55 O
ATOM 6 C5' U B 493 43.726 12.293 -36.933 1.00207.21 C
ATOM 7 C4' U B 493 42.341 12.773 -37.310 1.00207.62 C
ATOM 8 O4' U B 493 42.382 13.528 -38.552 1.00208.49 O
ATOM 9 C3' U B 493 41.324 11.683 -37.600 1.00207.79 C
ATOM 10 O3' U B 493 40.816 11.054 -36.442 1.00207.03 O
ATOM 11 C2' U B 493 40.289 12.414 -38.439 1.00208.50 C
ATOM 12 O2' U B 493 39.496 13.275 -37.635 1.00208.14 O
ATOM 13 C1' U B 493 41.208 13.269 -39.309 1.00209.06 C
ATOM 14 N1 U B 493 41.599 12.552 -40.547 1.00209.77 N
ATOM 15 C2 U B 493 40.668 12.467 -41.562 1.00210.53 C
ATOM 16 O2 U B 493 39.557 12.970 -41.478 1.00210.63 O
ATOM 17 N3 U B 493 41.097 11.773 -42.677 1.00211.18 N
ATOM 18 C4 U B 493 42.324 11.166 -42.883 1.00211.15 C
ATOM 19 O4 U B 493 42.553 10.586 -43.947 1.00211.80 O
ATOM 20 C5 U B 493 43.224 11.294 -41.782 1.00210.34 C
ATOM 21 C6 U B 493 42.837 11.960 -40.686 1.00209.70 C
ATOM 22 P A B 494 41.470 9.670 -35.949 1.00189.20 P
ATOM 23 OP1 A B 494 42.335 9.985 -34.786 1.00188.42 O
ATOM 24 OP2 A B 494 42.080 9.030 -37.142 1.00189.86 O
ATOM 25 O5' A B 494 40.211 8.830 -35.475 1.00188.95 O
TER
ATOM 2 P A A 494 41.470 9.670 -35.949 1.00189.20 P
ATOM 3 OP1 A A 494 42.335 9.985 -34.786 1.00188.42 O
ATOM 4 OP2 A A 494 42.080 9.030 -37.142 1.00189.86 O
ATOM 5 O5' A A 494 40.211 8.830 -35.475 1.00188.95 O
ATOM 6 C5' A A 494 39.000 9.476 -35.146 1.00188.90 C
ATOM 7 C4' A A 494 37.976 9.308 -36.235 1.00189.69 C
ATOM 8 O4' A A 494 38.389 10.014 -37.432 1.00190.47 O
ATOM 9 C3' A A 494 37.743 7.893 -36.731 1.00189.92 C
ATOM 10 O3' A A 494 36.964 7.110 -35.834 1.00189.38 O
ATOM 11 C2' A A 494 37.074 8.142 -38.082 1.00190.89 C
ATOM 12 O2' A A 494 35.692 8.431 -37.923 1.00190.96 O
ATOM 13 C1' A A 494 37.779 9.410 -38.555 1.00191.22 C
ATOM 14 N9 A A 494 38.793 9.126 -39.586 1.00191.77 N
ATOM 15 C8 A A 494 40.143 9.370 -39.634 1.00191.69 C
ATOM 16 N7 A A 494 40.713 8.983 -40.749 1.00192.34 N
ATOM 17 C5 A A 494 39.665 8.439 -41.483 1.00192.89 C
ATOM 18 C6 A A 494 39.598 7.847 -42.757 1.00193.72 C
ATOM 19 N6 A A 494 40.664 7.719 -43.552 1.00194.15 N
ATOM 20 N1 A A 494 38.389 7.408 -43.196 1.00194.12 N
ATOM 21 C2 A A 494 37.317 7.553 -42.404 1.00193.70 C
ATOM 22 N3 A A 494 37.258 8.096 -41.191 1.00192.93 N
ATOM 23 C4 A A 494 38.476 8.522 -40.782 1.00192.55 C
ATOM 24 P A A 495 36.498 5.619 -36.232 1.00194.12 P
ATOM 25 OP1 A A 495 35.627 5.128 -35.137 1.00193.49 O
ATOM 26 OP2 A A 495 37.724 4.852 -36.569 1.00194.17 O
ATOM 27 O5' A A 495 35.631 5.860 -37.544 1.00195.08 O
TER
ATOM 1 O3' G B 492 46.926 13.735 -38.613 1.00230.30 O
ATOM 2 P U B 493 46.185 12.522 -37.835 1.00207.63 P
ATOM 3 OP1 U B 493 46.965 12.259 -36.601 1.00206.77 O
ATOM 4 OP2 U B 493 46.014 11.420 -38.813 1.00208.18 O
ATOM 5 O5' U B 493 44.753 13.131 -37.450 1.00207.55 O
ATOM 6 C5' U B 493 43.726 12.293 -36.933 1.00207.21 C
ATOM 7 C4' U B 493 42.341 12.773 -37.310 1.00207.62 C
ATOM 8 O4' U B 493 42.382 13.528 -38.552 1.00208.49 O
ATOM 9 C3' U B 493 41.324 11.683 -37.600 1.00207.79 C
ATOM 10 O3' U B 493 40.816 11.054 -36.442 1.00207.03 O
ATOM 11 C2' U B 493 40.289 12.414 -38.439 1.00208.50 C
ATOM 12 O2' U B 493 39.496 13.275 -37.635 1.00208.14 O
ATOM 13 C1' U B 493 41.208 13.269 -39.309 1.00209.06 C
ATOM 14 N1 U B 493 41.599 12.552 -40.547 1.00209.77 N
ATOM 15 C2 U B 493 40.668 12.467 -41.562 1.00210.53 C
ATOM 16 O2 U B 493 39.557 12.970 -41.478 1.00210.63 O
ATOM 17 N3 U B 493 41.097 11.773 -42.677 1.00211.18 N
ATOM 18 C4 U B 493 42.324 11.166 -42.883 1.00211.15 C
ATOM 19 O4 U B 493 42.553 10.586 -43.947 1.00211.80 O
ATOM 20 C5 U B 493 43.224 11.294 -41.782 1.00210.34 C
ATOM 21 C6 U B 493 42.837 11.960 -40.686 1.00209.70 C
ATOM 22 P A B 494 41.470 9.670 -35.949 1.00189.20 P
ATOM 23 OP1 A B 494 42.335 9.985 -34.786 1.00188.42 O
ATOM 24 OP2 A B 494 42.080 9.030 -37.142 1.00189.86 O
ATOM 25 O5' A B 494 40.211 8.830 -35.475 1.00188.95 O
TER
Atoms:
OP1: (42.335,9.985,-34.786)
OP2: (42.080,9.030,-37.142)
C3': (37.743,7.893,-36.731)
C1': (37.779,9.410,-38.555)
C5': (39.000,9.476,-35.146)
O4': (38.389,10.014,-37.432)
C8: (40.143,9.370,-39.634)
O2': (35.692,8.431,-37.923)
C6: (39.598,7.847,-42.757)
C5: (39.665,8.439,-41.483)
C4: (38.476,8.522,-40.782)
P: (41.470,9.670,-35.949)
C4': (37.976,9.308,-36.235)
C2': (37.074,8.142,-38.082)
C2: (37.317,7.553,-42.404)
N1: (38.389,7.408,-43.196)
N3: (37.258,8.096,-41.191)
N6: (40.664,7.719,-43.552)
N7: (40.713,8.983,-40.749)
N9: (38.793,9.126,-39.586)
O5': (40.211,8.830,-35.475)
O3': (36.964,7.110,-35.834)
OP2: (42.080,9.030,-37.142)
C3': (37.743,7.893,-36.731)
C1': (37.779,9.410,-38.555)
C5': (39.000,9.476,-35.146)
O4': (38.389,10.014,-37.432)
C8: (40.143,9.370,-39.634)
O2': (35.692,8.431,-37.923)
C6: (39.598,7.847,-42.757)
C5: (39.665,8.439,-41.483)
C4: (38.476,8.522,-40.782)
P: (41.470,9.670,-35.949)
C4': (37.976,9.308,-36.235)
C2': (37.074,8.142,-38.082)
C2: (37.317,7.553,-42.404)
N1: (38.389,7.408,-43.196)
N3: (37.258,8.096,-41.191)
N6: (40.664,7.719,-43.552)
N7: (40.713,8.983,-40.749)
N9: (38.793,9.126,-39.586)
O5': (40.211,8.830,-35.475)
O3': (36.964,7.110,-35.834)
C4: (42.324,11.166,-42.883)
N3: (41.097,11.773,-42.677)
OP1: (46.965,12.259,-36.601)
OP2: (46.014,11.420,-38.813)
C2: (40.668,12.467,-41.562)
C1': (41.208,13.269,-39.309)
C3': (41.324,11.683,-37.600)
O5': (44.753,13.131,-37.450)
O4': (42.382,13.528,-38.552)
C5': (43.726,12.293,-36.933)
P: (46.185,12.522,-37.835)
C4': (42.341,12.773,-37.310)
C2': (40.289,12.414,-38.439)
O2': (39.496,13.275,-37.635)
N1: (41.599,12.552,-40.547)
O4: (42.553,10.586,-43.947)
O2: (39.557,12.970,-41.478)
C6: (42.837,11.960,-40.686)
C5: (43.224,11.294,-41.782)
O3': (40.816,11.054,-36.442)
N3: (41.097,11.773,-42.677)
OP1: (46.965,12.259,-36.601)
OP2: (46.014,11.420,-38.813)
C2: (40.668,12.467,-41.562)
C1': (41.208,13.269,-39.309)
C3': (41.324,11.683,-37.600)
O5': (44.753,13.131,-37.450)
O4': (42.382,13.528,-38.552)
C5': (43.726,12.293,-36.933)
P: (46.185,12.522,-37.835)
C4': (42.341,12.773,-37.310)
C2': (40.289,12.414,-38.439)
O2': (39.496,13.275,-37.635)
N1: (41.599,12.552,-40.547)
O4: (42.553,10.586,-43.947)
O2: (39.557,12.970,-41.478)
C6: (42.837,11.960,-40.686)
C5: (43.224,11.294,-41.782)
O3': (40.816,11.054,-36.442)
Image (generated by PyMOL):