Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:E61:E60
Extra
PDB:
ATOM 1 O3' U A 60 -12.218 17.596 119.247 1.00 95.63 O
ATOM 2 P A A 61 -13.387 17.153 118.220 1.00 88.07 P
ATOM 3 OP1 A A 61 -14.567 16.841 119.055 1.00 79.44 O
ATOM 4 OP2 A A 61 -12.878 16.133 117.276 1.00 88.75 O
ATOM 5 O5' A A 61 -13.756 18.466 117.400 1.00 88.93 O
ATOM 6 C5' A A 61 -15.078 18.634 116.903 1.00 85.35 C
ATOM 7 C4' A A 61 -15.065 18.938 115.424 1.00 89.37 C
ATOM 8 O4' A A 61 -13.781 18.616 114.830 1.00 95.40 O
ATOM 9 C3' A A 61 -16.070 18.124 114.630 1.00 95.80 C
ATOM 10 O3' A A 61 -17.362 18.717 114.699 1.00 96.23 O
ATOM 11 C2' A A 61 -15.474 18.157 113.228 1.00 95.59 C
ATOM 12 O2' A A 61 -15.752 19.369 112.557 1.00100.24 O
ATOM 13 C1' A A 61 -13.975 18.075 113.532 1.00 89.89 C
ATOM 14 N9 A A 61 -13.431 16.716 113.529 1.00 93.28 N
ATOM 15 C8 A A 61 -12.642 16.153 114.501 1.00 91.78 C
ATOM 16 N7 A A 61 -12.296 14.914 114.255 1.00 88.95 N
ATOM 17 C5 A A 61 -12.893 14.639 113.035 1.00 90.29 C
ATOM 18 C6 A A 61 -12.903 13.489 112.233 1.00 90.75 C
ATOM 19 N6 A A 61 -12.272 12.357 112.555 1.00 87.38 N
ATOM 20 N1 A A 61 -13.593 13.540 111.074 1.00 92.02 N
ATOM 21 C2 A A 61 -14.225 14.681 110.754 1.00 96.49 C
ATOM 22 N3 A A 61 -14.289 15.830 111.427 1.00 91.70 N
ATOM 23 C4 A A 61 -13.595 15.742 112.573 1.00 91.77 C
ATOM 24 P C A 62 -18.612 17.845 115.213 1.00 95.27 P
ATOM 25 OP1 C A 62 -19.837 18.583 114.822 1.00 98.89 O
ATOM 26 OP2 C A 62 -18.399 17.483 116.640 1.00 69.87 O
ATOM 27 O5' C A 62 -18.532 16.513 114.342 1.00 87.14 O
TER
ATOM 1 O3' U B 59 -7.117 17.466 120.605 1.00 99.34 O
ATOM 2 P U B 60 -8.199 17.544 121.795 1.00 93.66 P
ATOM 3 OP1 U B 60 -7.693 18.515 122.793 1.00 88.04 O
ATOM 4 OP2 U B 60 -8.547 16.163 122.221 1.00 89.01 O
ATOM 5 O5' U B 60 -9.481 18.197 121.120 1.00100.08 O
ATOM 6 C5' U B 60 -9.356 19.355 120.310 1.00 95.58 C
ATOM 7 C4' U B 60 -10.572 19.504 119.439 1.00 87.47 C
ATOM 8 O4' U B 60 -10.232 20.395 118.348 1.00 94.10 O
ATOM 9 C3' U B 60 -10.998 18.204 118.785 1.00 83.40 C
ATOM 10 O3' U B 60 -12.218 17.596 119.247 1.00 95.63 O
ATOM 11 C2' U B 60 -10.383 18.186 117.388 1.00 80.10 C
ATOM 12 O2' U B 60 -11.239 17.708 116.377 1.00 97.32 O
ATOM 13 C1' U B 60 -10.095 19.673 117.139 1.00 88.46 C
ATOM 14 N1 U B 60 -8.745 19.930 116.620 1.00 86.88 N
ATOM 15 C2 U B 60 -8.552 19.832 115.261 1.00 90.42 C
ATOM 16 O2 U B 60 -9.453 19.585 114.485 1.00 91.81 O
ATOM 17 N3 U B 60 -7.262 20.038 114.843 1.00 90.60 N
ATOM 18 C4 U B 60 -6.173 20.336 115.630 1.00 89.58 C
ATOM 19 O4 U B 60 -5.068 20.481 115.104 1.00 94.10 O
ATOM 20 C5 U B 60 -6.460 20.441 117.027 1.00 87.75 C
ATOM 21 C6 U B 60 -7.708 20.243 117.462 1.00 85.41 C
ATOM 22 P A B 61 -13.387 17.153 118.220 1.00 88.07 P
ATOM 23 OP1 A B 61 -14.567 16.841 119.055 1.00 79.44 O
ATOM 24 OP2 A B 61 -12.878 16.133 117.276 1.00 88.75 O
ATOM 25 O5' A B 61 -13.756 18.466 117.400 1.00 88.93 O
TER
ATOM 2 P A A 61 -13.387 17.153 118.220 1.00 88.07 P
ATOM 3 OP1 A A 61 -14.567 16.841 119.055 1.00 79.44 O
ATOM 4 OP2 A A 61 -12.878 16.133 117.276 1.00 88.75 O
ATOM 5 O5' A A 61 -13.756 18.466 117.400 1.00 88.93 O
ATOM 6 C5' A A 61 -15.078 18.634 116.903 1.00 85.35 C
ATOM 7 C4' A A 61 -15.065 18.938 115.424 1.00 89.37 C
ATOM 8 O4' A A 61 -13.781 18.616 114.830 1.00 95.40 O
ATOM 9 C3' A A 61 -16.070 18.124 114.630 1.00 95.80 C
ATOM 10 O3' A A 61 -17.362 18.717 114.699 1.00 96.23 O
ATOM 11 C2' A A 61 -15.474 18.157 113.228 1.00 95.59 C
ATOM 12 O2' A A 61 -15.752 19.369 112.557 1.00100.24 O
ATOM 13 C1' A A 61 -13.975 18.075 113.532 1.00 89.89 C
ATOM 14 N9 A A 61 -13.431 16.716 113.529 1.00 93.28 N
ATOM 15 C8 A A 61 -12.642 16.153 114.501 1.00 91.78 C
ATOM 16 N7 A A 61 -12.296 14.914 114.255 1.00 88.95 N
ATOM 17 C5 A A 61 -12.893 14.639 113.035 1.00 90.29 C
ATOM 18 C6 A A 61 -12.903 13.489 112.233 1.00 90.75 C
ATOM 19 N6 A A 61 -12.272 12.357 112.555 1.00 87.38 N
ATOM 20 N1 A A 61 -13.593 13.540 111.074 1.00 92.02 N
ATOM 21 C2 A A 61 -14.225 14.681 110.754 1.00 96.49 C
ATOM 22 N3 A A 61 -14.289 15.830 111.427 1.00 91.70 N
ATOM 23 C4 A A 61 -13.595 15.742 112.573 1.00 91.77 C
ATOM 24 P C A 62 -18.612 17.845 115.213 1.00 95.27 P
ATOM 25 OP1 C A 62 -19.837 18.583 114.822 1.00 98.89 O
ATOM 26 OP2 C A 62 -18.399 17.483 116.640 1.00 69.87 O
ATOM 27 O5' C A 62 -18.532 16.513 114.342 1.00 87.14 O
TER
ATOM 1 O3' U B 59 -7.117 17.466 120.605 1.00 99.34 O
ATOM 2 P U B 60 -8.199 17.544 121.795 1.00 93.66 P
ATOM 3 OP1 U B 60 -7.693 18.515 122.793 1.00 88.04 O
ATOM 4 OP2 U B 60 -8.547 16.163 122.221 1.00 89.01 O
ATOM 5 O5' U B 60 -9.481 18.197 121.120 1.00100.08 O
ATOM 6 C5' U B 60 -9.356 19.355 120.310 1.00 95.58 C
ATOM 7 C4' U B 60 -10.572 19.504 119.439 1.00 87.47 C
ATOM 8 O4' U B 60 -10.232 20.395 118.348 1.00 94.10 O
ATOM 9 C3' U B 60 -10.998 18.204 118.785 1.00 83.40 C
ATOM 10 O3' U B 60 -12.218 17.596 119.247 1.00 95.63 O
ATOM 11 C2' U B 60 -10.383 18.186 117.388 1.00 80.10 C
ATOM 12 O2' U B 60 -11.239 17.708 116.377 1.00 97.32 O
ATOM 13 C1' U B 60 -10.095 19.673 117.139 1.00 88.46 C
ATOM 14 N1 U B 60 -8.745 19.930 116.620 1.00 86.88 N
ATOM 15 C2 U B 60 -8.552 19.832 115.261 1.00 90.42 C
ATOM 16 O2 U B 60 -9.453 19.585 114.485 1.00 91.81 O
ATOM 17 N3 U B 60 -7.262 20.038 114.843 1.00 90.60 N
ATOM 18 C4 U B 60 -6.173 20.336 115.630 1.00 89.58 C
ATOM 19 O4 U B 60 -5.068 20.481 115.104 1.00 94.10 O
ATOM 20 C5 U B 60 -6.460 20.441 117.027 1.00 87.75 C
ATOM 21 C6 U B 60 -7.708 20.243 117.462 1.00 85.41 C
ATOM 22 P A B 61 -13.387 17.153 118.220 1.00 88.07 P
ATOM 23 OP1 A B 61 -14.567 16.841 119.055 1.00 79.44 O
ATOM 24 OP2 A B 61 -12.878 16.133 117.276 1.00 88.75 O
ATOM 25 O5' A B 61 -13.756 18.466 117.400 1.00 88.93 O
TER
Atoms:
OP1: (-14.567,16.841,119.055)
OP2: (-12.878,16.133,117.276)
C3': (-16.070,18.124,114.630)
C1': (-13.975,18.075,113.532)
C5': (-15.078,18.634,116.903)
O4': (-13.781,18.616,114.830)
C8: (-12.642,16.153,114.501)
O2': (-15.752,19.369,112.557)
C6: (-12.903,13.489,112.233)
C5: (-12.893,14.639,113.035)
C4: (-13.595,15.742,112.573)
P: (-13.387,17.153,118.220)
C4': (-15.065,18.938,115.424)
C2': (-15.474,18.157,113.228)
C2: (-14.225,14.681,110.754)
N1: (-13.593,13.540,111.074)
N3: (-14.289,15.830,111.427)
N6: (-12.272,12.357,112.555)
N7: (-12.296,14.914,114.255)
N9: (-13.431,16.716,113.529)
O5': (-13.756,18.466,117.400)
O3': (-17.362,18.717,114.699)
OP2: (-12.878,16.133,117.276)
C3': (-16.070,18.124,114.630)
C1': (-13.975,18.075,113.532)
C5': (-15.078,18.634,116.903)
O4': (-13.781,18.616,114.830)
C8: (-12.642,16.153,114.501)
O2': (-15.752,19.369,112.557)
C6: (-12.903,13.489,112.233)
C5: (-12.893,14.639,113.035)
C4: (-13.595,15.742,112.573)
P: (-13.387,17.153,118.220)
C4': (-15.065,18.938,115.424)
C2': (-15.474,18.157,113.228)
C2: (-14.225,14.681,110.754)
N1: (-13.593,13.540,111.074)
N3: (-14.289,15.830,111.427)
N6: (-12.272,12.357,112.555)
N7: (-12.296,14.914,114.255)
N9: (-13.431,16.716,113.529)
O5': (-13.756,18.466,117.400)
O3': (-17.362,18.717,114.699)
C4: (-6.173,20.336,115.630)
N3: (-7.262,20.038,114.843)
OP1: (-7.693,18.515,122.793)
OP2: (-8.547,16.163,122.221)
C2: (-8.552,19.832,115.261)
C1': (-10.095,19.673,117.139)
C3': (-10.998,18.204,118.785)
O5': (-9.481,18.197,121.120)
O4': (-10.232,20.395,118.348)
C5': (-9.356,19.355,120.310)
P: (-8.199,17.544,121.795)
C4': (-10.572,19.504,119.439)
C2': (-10.383,18.186,117.388)
O2': (-11.239,17.708,116.377)
N1: (-8.745,19.930,116.620)
O4: (-5.068,20.481,115.104)
O2: (-9.453,19.585,114.485)
C6: (-7.708,20.243,117.462)
C5: (-6.460,20.441,117.027)
O3': (-12.218,17.596,119.247)
N3: (-7.262,20.038,114.843)
OP1: (-7.693,18.515,122.793)
OP2: (-8.547,16.163,122.221)
C2: (-8.552,19.832,115.261)
C1': (-10.095,19.673,117.139)
C3': (-10.998,18.204,118.785)
O5': (-9.481,18.197,121.120)
O4': (-10.232,20.395,118.348)
C5': (-9.356,19.355,120.310)
P: (-8.199,17.544,121.795)
C4': (-10.572,19.504,119.439)
C2': (-10.383,18.186,117.388)
O2': (-11.239,17.708,116.377)
N1: (-8.745,19.930,116.620)
O4: (-5.068,20.481,115.104)
O2: (-9.453,19.585,114.485)
C6: (-7.708,20.243,117.462)
C5: (-6.460,20.441,117.027)
O3': (-12.218,17.596,119.247)
Image (generated by PyMOL):