Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:B61:B60
Extra
PDB:
ATOM 1 O3' U A 60 95.129 18.177 36.323 1.00114.24 O
ATOM 2 P A A 61 95.658 16.967 37.238 1.00108.42 P
ATOM 3 OP1 A A 61 97.092 16.750 36.913 1.00117.12 O
ATOM 4 OP2 A A 61 94.695 15.845 37.091 1.00 96.61 O
ATOM 5 O5' A A 61 95.571 17.530 38.730 1.00 93.31 O
ATOM 6 C5' A A 61 96.047 18.837 39.062 1.00 93.93 C
ATOM 7 C4' A A 61 96.121 19.000 40.565 1.00100.57 C
ATOM 8 O4' A A 61 94.799 18.786 41.127 1.00104.71 O
ATOM 9 C3' A A 61 97.026 18.004 41.279 1.00109.42 C
ATOM 10 O3' A A 61 98.355 18.514 41.373 1.00118.98 O
ATOM 11 C2' A A 61 96.380 17.893 42.656 1.00107.65 C
ATOM 12 O2' A A 61 96.759 18.931 43.537 1.00106.03 O
ATOM 13 C1' A A 61 94.893 18.002 42.305 1.00100.33 C
ATOM 14 N9 A A 61 94.285 16.703 42.019 1.00 92.16 N
ATOM 15 C8 A A 61 93.817 16.261 40.807 1.00 84.94 C
ATOM 16 N7 A A 61 93.350 15.038 40.833 1.00 83.61 N
ATOM 17 C5 A A 61 93.514 14.648 42.153 1.00 86.48 C
ATOM 18 C6 A A 61 93.215 13.454 42.825 1.00 87.05 C
ATOM 19 N6 A A 61 92.666 12.393 42.231 1.00 88.53 N
ATOM 20 N1 A A 61 93.503 13.386 44.144 1.00 91.48 N
ATOM 21 C2 A A 61 94.052 14.454 44.736 1.00 91.89 C
ATOM 22 N3 A A 61 94.380 15.633 44.210 1.00 95.00 N
ATOM 23 C4 A A 61 94.082 15.666 42.899 1.00 91.57 C
ATOM 24 P C A 62 99.596 17.610 40.898 1.00120.64 P
ATOM 25 OP1 C A 62 100.840 18.358 41.207 1.00127.07 O
ATOM 26 OP2 C A 62 99.326 17.180 39.502 1.00121.08 O
ATOM 27 O5' C A 62 99.530 16.318 41.830 1.00117.72 O
TER
ATOM 1 O3' U B 59 89.429 17.382 33.413 1.00103.55 O
ATOM 2 P U B 60 90.944 17.663 32.973 1.00 97.80 P
ATOM 3 OP1 U B 60 90.901 18.647 31.868 1.00 89.14 O
ATOM 4 OP2 U B 60 91.613 16.352 32.763 1.00100.84 O
ATOM 5 O5' U B 60 91.594 18.397 34.229 1.00100.43 O
ATOM 6 C5' U B 60 92.624 19.356 34.031 1.00107.53 C
ATOM 7 C4' U B 60 93.375 19.612 35.314 1.00117.97 C
ATOM 8 O4' U B 60 92.539 20.383 36.213 1.00121.59 O
ATOM 9 C3' U B 60 93.729 18.334 36.062 1.00118.33 C
ATOM 10 O3' U B 60 95.129 18.177 36.323 1.00114.24 O
ATOM 11 C2' U B 60 92.669 18.166 37.154 1.00114.67 C
ATOM 12 O2' U B 60 93.215 17.791 38.399 1.00125.36 O
ATOM 13 C1' U B 60 92.159 19.599 37.323 1.00113.53 C
ATOM 14 N1 U B 60 90.733 19.820 37.605 1.00104.01 N
ATOM 15 C2 U B 60 90.302 19.601 38.895 1.00100.54 C
ATOM 16 O2 U B 60 91.037 19.196 39.773 1.00106.84 O
ATOM 17 N3 U B 60 88.980 19.878 39.122 1.00 99.30 N
ATOM 18 C4 U B 60 88.061 20.338 38.208 1.00 96.93 C
ATOM 19 O4 U B 60 86.903 20.555 38.570 1.00 87.17 O
ATOM 20 C5 U B 60 88.578 20.523 36.888 1.00 98.77 C
ATOM 21 C6 U B 60 89.865 20.258 36.637 1.00101.70 C
ATOM 22 P A B 61 95.658 16.967 37.238 1.00108.42 P
ATOM 23 OP1 A B 61 97.092 16.750 36.913 1.00117.12 O
ATOM 24 OP2 A B 61 94.695 15.845 37.091 1.00 96.61 O
ATOM 25 O5' A B 61 95.571 17.530 38.730 1.00 93.31 O
TER
ATOM 2 P A A 61 95.658 16.967 37.238 1.00108.42 P
ATOM 3 OP1 A A 61 97.092 16.750 36.913 1.00117.12 O
ATOM 4 OP2 A A 61 94.695 15.845 37.091 1.00 96.61 O
ATOM 5 O5' A A 61 95.571 17.530 38.730 1.00 93.31 O
ATOM 6 C5' A A 61 96.047 18.837 39.062 1.00 93.93 C
ATOM 7 C4' A A 61 96.121 19.000 40.565 1.00100.57 C
ATOM 8 O4' A A 61 94.799 18.786 41.127 1.00104.71 O
ATOM 9 C3' A A 61 97.026 18.004 41.279 1.00109.42 C
ATOM 10 O3' A A 61 98.355 18.514 41.373 1.00118.98 O
ATOM 11 C2' A A 61 96.380 17.893 42.656 1.00107.65 C
ATOM 12 O2' A A 61 96.759 18.931 43.537 1.00106.03 O
ATOM 13 C1' A A 61 94.893 18.002 42.305 1.00100.33 C
ATOM 14 N9 A A 61 94.285 16.703 42.019 1.00 92.16 N
ATOM 15 C8 A A 61 93.817 16.261 40.807 1.00 84.94 C
ATOM 16 N7 A A 61 93.350 15.038 40.833 1.00 83.61 N
ATOM 17 C5 A A 61 93.514 14.648 42.153 1.00 86.48 C
ATOM 18 C6 A A 61 93.215 13.454 42.825 1.00 87.05 C
ATOM 19 N6 A A 61 92.666 12.393 42.231 1.00 88.53 N
ATOM 20 N1 A A 61 93.503 13.386 44.144 1.00 91.48 N
ATOM 21 C2 A A 61 94.052 14.454 44.736 1.00 91.89 C
ATOM 22 N3 A A 61 94.380 15.633 44.210 1.00 95.00 N
ATOM 23 C4 A A 61 94.082 15.666 42.899 1.00 91.57 C
ATOM 24 P C A 62 99.596 17.610 40.898 1.00120.64 P
ATOM 25 OP1 C A 62 100.840 18.358 41.207 1.00127.07 O
ATOM 26 OP2 C A 62 99.326 17.180 39.502 1.00121.08 O
ATOM 27 O5' C A 62 99.530 16.318 41.830 1.00117.72 O
TER
ATOM 1 O3' U B 59 89.429 17.382 33.413 1.00103.55 O
ATOM 2 P U B 60 90.944 17.663 32.973 1.00 97.80 P
ATOM 3 OP1 U B 60 90.901 18.647 31.868 1.00 89.14 O
ATOM 4 OP2 U B 60 91.613 16.352 32.763 1.00100.84 O
ATOM 5 O5' U B 60 91.594 18.397 34.229 1.00100.43 O
ATOM 6 C5' U B 60 92.624 19.356 34.031 1.00107.53 C
ATOM 7 C4' U B 60 93.375 19.612 35.314 1.00117.97 C
ATOM 8 O4' U B 60 92.539 20.383 36.213 1.00121.59 O
ATOM 9 C3' U B 60 93.729 18.334 36.062 1.00118.33 C
ATOM 10 O3' U B 60 95.129 18.177 36.323 1.00114.24 O
ATOM 11 C2' U B 60 92.669 18.166 37.154 1.00114.67 C
ATOM 12 O2' U B 60 93.215 17.791 38.399 1.00125.36 O
ATOM 13 C1' U B 60 92.159 19.599 37.323 1.00113.53 C
ATOM 14 N1 U B 60 90.733 19.820 37.605 1.00104.01 N
ATOM 15 C2 U B 60 90.302 19.601 38.895 1.00100.54 C
ATOM 16 O2 U B 60 91.037 19.196 39.773 1.00106.84 O
ATOM 17 N3 U B 60 88.980 19.878 39.122 1.00 99.30 N
ATOM 18 C4 U B 60 88.061 20.338 38.208 1.00 96.93 C
ATOM 19 O4 U B 60 86.903 20.555 38.570 1.00 87.17 O
ATOM 20 C5 U B 60 88.578 20.523 36.888 1.00 98.77 C
ATOM 21 C6 U B 60 89.865 20.258 36.637 1.00101.70 C
ATOM 22 P A B 61 95.658 16.967 37.238 1.00108.42 P
ATOM 23 OP1 A B 61 97.092 16.750 36.913 1.00117.12 O
ATOM 24 OP2 A B 61 94.695 15.845 37.091 1.00 96.61 O
ATOM 25 O5' A B 61 95.571 17.530 38.730 1.00 93.31 O
TER
Atoms:
OP1: (97.092,16.750,36.913)
OP2: (94.695,15.845,37.091)
C3': (97.026,18.004,41.279)
C1': (94.893,18.002,42.305)
C5': (96.047,18.837,39.062)
O4': (94.799,18.786,41.127)
C8: (93.817,16.261,40.807)
O2': (96.759,18.931,43.537)
C6: (93.215,13.454,42.825)
C5: (93.514,14.648,42.153)
C4: (94.082,15.666,42.899)
P: (95.658,16.967,37.238)
C4': (96.121,19.000,40.565)
C2': (96.380,17.893,42.656)
C2: (94.052,14.454,44.736)
N1: (93.503,13.386,44.144)
N3: (94.380,15.633,44.210)
N6: (92.666,12.393,42.231)
N7: (93.350,15.038,40.833)
N9: (94.285,16.703,42.019)
O5': (95.571,17.530,38.730)
O3': (98.355,18.514,41.373)
OP2: (94.695,15.845,37.091)
C3': (97.026,18.004,41.279)
C1': (94.893,18.002,42.305)
C5': (96.047,18.837,39.062)
O4': (94.799,18.786,41.127)
C8: (93.817,16.261,40.807)
O2': (96.759,18.931,43.537)
C6: (93.215,13.454,42.825)
C5: (93.514,14.648,42.153)
C4: (94.082,15.666,42.899)
P: (95.658,16.967,37.238)
C4': (96.121,19.000,40.565)
C2': (96.380,17.893,42.656)
C2: (94.052,14.454,44.736)
N1: (93.503,13.386,44.144)
N3: (94.380,15.633,44.210)
N6: (92.666,12.393,42.231)
N7: (93.350,15.038,40.833)
N9: (94.285,16.703,42.019)
O5': (95.571,17.530,38.730)
O3': (98.355,18.514,41.373)
C4: (88.061,20.338,38.208)
N3: (88.980,19.878,39.122)
OP1: (90.901,18.647,31.868)
OP2: (91.613,16.352,32.763)
C2: (90.302,19.601,38.895)
C1': (92.159,19.599,37.323)
C3': (93.729,18.334,36.062)
O5': (91.594,18.397,34.229)
O4': (92.539,20.383,36.213)
C5': (92.624,19.356,34.031)
P: (90.944,17.663,32.973)
C4': (93.375,19.612,35.314)
C2': (92.669,18.166,37.154)
O2': (93.215,17.791,38.399)
N1: (90.733,19.820,37.605)
O4: (86.903,20.555,38.570)
O2: (91.037,19.196,39.773)
C6: (89.865,20.258,36.637)
C5: (88.578,20.523,36.888)
O3': (95.129,18.177,36.323)
N3: (88.980,19.878,39.122)
OP1: (90.901,18.647,31.868)
OP2: (91.613,16.352,32.763)
C2: (90.302,19.601,38.895)
C1': (92.159,19.599,37.323)
C3': (93.729,18.334,36.062)
O5': (91.594,18.397,34.229)
O4': (92.539,20.383,36.213)
C5': (92.624,19.356,34.031)
P: (90.944,17.663,32.973)
C4': (93.375,19.612,35.314)
C2': (92.669,18.166,37.154)
O2': (93.215,17.791,38.399)
N1: (90.733,19.820,37.605)
O4: (86.903,20.555,38.570)
O2: (91.037,19.196,39.773)
C6: (89.865,20.258,36.637)
C5: (88.578,20.523,36.888)
O3': (95.129,18.177,36.323)
Image (generated by PyMOL):