Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y39:D44:D43
Extra
PDB:
ATOM 1 O3' U A 43 127.611 52.726 -4.687 1.00 55.80 O
ATOM 2 P A A 44 126.659 51.516 -4.235 1.00 55.77 P
ATOM 3 OP1 A A 44 127.426 50.243 -4.315 1.00 56.14 O
ATOM 4 OP2 A A 44 125.393 51.667 -5.001 1.00 57.20 O
ATOM 5 O5' A A 44 126.376 51.821 -2.703 1.00 53.72 O
ATOM 6 C5' A A 44 125.633 50.917 -1.910 1.00 51.60 C
ATOM 7 C4' A A 44 126.298 50.753 -0.574 1.00 50.88 C
ATOM 8 O4' A A 44 127.555 50.058 -0.740 1.00 50.41 O
ATOM 9 C3' A A 44 126.693 52.064 0.068 1.00 51.64 C
ATOM 10 O3' A A 44 125.572 52.644 0.716 1.00 52.05 O
ATOM 11 C2' A A 44 127.821 51.654 1.010 1.00 50.73 C
ATOM 12 O2' A A 44 127.388 51.155 2.252 1.00 48.91 O
ATOM 13 C1' A A 44 128.482 50.529 0.215 1.00 49.96 C
ATOM 14 N9 A A 44 129.699 50.911 -0.487 1.00 49.70 N
ATOM 15 C8 A A 44 129.884 51.145 -1.829 1.00 50.16 C
ATOM 16 N7 A A 44 131.131 51.395 -2.153 1.00 50.17 N
ATOM 17 C5 A A 44 131.808 51.330 -0.940 1.00 49.60 C
ATOM 18 C6 A A 44 133.164 51.481 -0.600 1.00 49.47 C
ATOM 19 N6 A A 44 134.136 51.685 -1.492 1.00 48.87 N
ATOM 20 N1 A A 44 133.496 51.396 0.708 1.00 49.59 N
ATOM 21 C2 A A 44 132.529 51.150 1.600 1.00 49.43 C
ATOM 22 N3 A A 44 131.227 50.962 1.401 1.00 49.43 N
ATOM 23 C4 A A 44 130.930 51.065 0.095 1.00 49.57 C
ATOM 24 P A A 45 125.306 54.219 0.557 1.00 52.89 P
ATOM 25 OP1 A A 45 123.962 54.495 1.140 1.00 51.78 O
ATOM 26 OP2 A A 45 125.598 54.615 -0.854 1.00 50.40 O
ATOM 27 O5' A A 45 126.420 54.839 1.509 1.00 50.72 O
TER
ATOM 1 O3' G B 42 124.338 56.446 -8.194 1.00 60.57 O
ATOM 2 P U B 43 124.227 54.993 -7.513 1.00 60.67 P
ATOM 3 OP1 U B 43 124.598 54.006 -8.562 1.00 60.54 O
ATOM 4 OP2 U B 43 122.913 54.887 -6.841 1.00 59.92 O
ATOM 5 O5' U B 43 125.361 55.006 -6.394 1.00 59.17 O
ATOM 6 C5' U B 43 126.731 54.949 -6.771 1.00 56.62 C
ATOM 7 C4' U B 43 127.625 54.961 -5.558 1.00 55.30 C
ATOM 8 O4' U B 43 127.670 56.280 -4.965 1.00 55.48 O
ATOM 9 C3' U B 43 127.231 54.063 -4.405 1.00 54.27 C
ATOM 10 O3' U B 43 127.611 52.726 -4.687 1.00 55.80 O
ATOM 11 C2' U B 43 128.041 54.666 -3.257 1.00 53.99 C
ATOM 12 O2' U B 43 129.406 54.277 -3.227 1.00 54.57 O
ATOM 13 C1' U B 43 127.964 56.160 -3.583 1.00 53.62 C
ATOM 14 N1 U B 43 126.903 56.823 -2.823 1.00 51.81 N
ATOM 15 C2 U B 43 127.217 57.277 -1.572 1.00 51.20 C
ATOM 16 O2 U B 43 128.336 57.193 -1.107 1.00 50.80 O
ATOM 17 N3 U B 43 126.175 57.837 -0.887 1.00 51.00 N
ATOM 18 C4 U B 43 124.890 57.998 -1.337 1.00 50.80 C
ATOM 19 O4 U B 43 124.092 58.608 -0.652 1.00 51.28 O
ATOM 20 C5 U B 43 124.654 57.520 -2.649 1.00 50.58 C
ATOM 21 C6 U B 43 125.645 56.965 -3.332 1.00 51.55 C
ATOM 22 P A B 44 126.659 51.516 -4.235 1.00 55.77 P
ATOM 23 OP1 A B 44 127.426 50.243 -4.315 1.00 56.14 O
ATOM 24 OP2 A B 44 125.393 51.667 -5.001 1.00 57.20 O
ATOM 25 O5' A B 44 126.376 51.821 -2.703 1.00 53.72 O
TER
ATOM 2 P A A 44 126.659 51.516 -4.235 1.00 55.77 P
ATOM 3 OP1 A A 44 127.426 50.243 -4.315 1.00 56.14 O
ATOM 4 OP2 A A 44 125.393 51.667 -5.001 1.00 57.20 O
ATOM 5 O5' A A 44 126.376 51.821 -2.703 1.00 53.72 O
ATOM 6 C5' A A 44 125.633 50.917 -1.910 1.00 51.60 C
ATOM 7 C4' A A 44 126.298 50.753 -0.574 1.00 50.88 C
ATOM 8 O4' A A 44 127.555 50.058 -0.740 1.00 50.41 O
ATOM 9 C3' A A 44 126.693 52.064 0.068 1.00 51.64 C
ATOM 10 O3' A A 44 125.572 52.644 0.716 1.00 52.05 O
ATOM 11 C2' A A 44 127.821 51.654 1.010 1.00 50.73 C
ATOM 12 O2' A A 44 127.388 51.155 2.252 1.00 48.91 O
ATOM 13 C1' A A 44 128.482 50.529 0.215 1.00 49.96 C
ATOM 14 N9 A A 44 129.699 50.911 -0.487 1.00 49.70 N
ATOM 15 C8 A A 44 129.884 51.145 -1.829 1.00 50.16 C
ATOM 16 N7 A A 44 131.131 51.395 -2.153 1.00 50.17 N
ATOM 17 C5 A A 44 131.808 51.330 -0.940 1.00 49.60 C
ATOM 18 C6 A A 44 133.164 51.481 -0.600 1.00 49.47 C
ATOM 19 N6 A A 44 134.136 51.685 -1.492 1.00 48.87 N
ATOM 20 N1 A A 44 133.496 51.396 0.708 1.00 49.59 N
ATOM 21 C2 A A 44 132.529 51.150 1.600 1.00 49.43 C
ATOM 22 N3 A A 44 131.227 50.962 1.401 1.00 49.43 N
ATOM 23 C4 A A 44 130.930 51.065 0.095 1.00 49.57 C
ATOM 24 P A A 45 125.306 54.219 0.557 1.00 52.89 P
ATOM 25 OP1 A A 45 123.962 54.495 1.140 1.00 51.78 O
ATOM 26 OP2 A A 45 125.598 54.615 -0.854 1.00 50.40 O
ATOM 27 O5' A A 45 126.420 54.839 1.509 1.00 50.72 O
TER
ATOM 1 O3' G B 42 124.338 56.446 -8.194 1.00 60.57 O
ATOM 2 P U B 43 124.227 54.993 -7.513 1.00 60.67 P
ATOM 3 OP1 U B 43 124.598 54.006 -8.562 1.00 60.54 O
ATOM 4 OP2 U B 43 122.913 54.887 -6.841 1.00 59.92 O
ATOM 5 O5' U B 43 125.361 55.006 -6.394 1.00 59.17 O
ATOM 6 C5' U B 43 126.731 54.949 -6.771 1.00 56.62 C
ATOM 7 C4' U B 43 127.625 54.961 -5.558 1.00 55.30 C
ATOM 8 O4' U B 43 127.670 56.280 -4.965 1.00 55.48 O
ATOM 9 C3' U B 43 127.231 54.063 -4.405 1.00 54.27 C
ATOM 10 O3' U B 43 127.611 52.726 -4.687 1.00 55.80 O
ATOM 11 C2' U B 43 128.041 54.666 -3.257 1.00 53.99 C
ATOM 12 O2' U B 43 129.406 54.277 -3.227 1.00 54.57 O
ATOM 13 C1' U B 43 127.964 56.160 -3.583 1.00 53.62 C
ATOM 14 N1 U B 43 126.903 56.823 -2.823 1.00 51.81 N
ATOM 15 C2 U B 43 127.217 57.277 -1.572 1.00 51.20 C
ATOM 16 O2 U B 43 128.336 57.193 -1.107 1.00 50.80 O
ATOM 17 N3 U B 43 126.175 57.837 -0.887 1.00 51.00 N
ATOM 18 C4 U B 43 124.890 57.998 -1.337 1.00 50.80 C
ATOM 19 O4 U B 43 124.092 58.608 -0.652 1.00 51.28 O
ATOM 20 C5 U B 43 124.654 57.520 -2.649 1.00 50.58 C
ATOM 21 C6 U B 43 125.645 56.965 -3.332 1.00 51.55 C
ATOM 22 P A B 44 126.659 51.516 -4.235 1.00 55.77 P
ATOM 23 OP1 A B 44 127.426 50.243 -4.315 1.00 56.14 O
ATOM 24 OP2 A B 44 125.393 51.667 -5.001 1.00 57.20 O
ATOM 25 O5' A B 44 126.376 51.821 -2.703 1.00 53.72 O
TER
Atoms:
OP1: (127.426,50.243,-4.315)
OP2: (125.393,51.667,-5.001)
C3': (126.693,52.064,0.068)
C1': (128.482,50.529,0.215)
C5': (125.633,50.917,-1.910)
O4': (127.555,50.058,-0.740)
C8: (129.884,51.145,-1.829)
O2': (127.388,51.155,2.252)
C6: (133.164,51.481,-0.600)
C5: (131.808,51.330,-0.940)
C4: (130.930,51.065,0.095)
P: (126.659,51.516,-4.235)
C4': (126.298,50.753,-0.574)
C2': (127.821,51.654,1.010)
C2: (132.529,51.150,1.600)
N1: (133.496,51.396,0.708)
N3: (131.227,50.962,1.401)
N6: (134.136,51.685,-1.492)
N7: (131.131,51.395,-2.153)
N9: (129.699,50.911,-0.487)
O5': (126.376,51.821,-2.703)
O3': (125.572,52.644,0.716)
OP2: (125.393,51.667,-5.001)
C3': (126.693,52.064,0.068)
C1': (128.482,50.529,0.215)
C5': (125.633,50.917,-1.910)
O4': (127.555,50.058,-0.740)
C8: (129.884,51.145,-1.829)
O2': (127.388,51.155,2.252)
C6: (133.164,51.481,-0.600)
C5: (131.808,51.330,-0.940)
C4: (130.930,51.065,0.095)
P: (126.659,51.516,-4.235)
C4': (126.298,50.753,-0.574)
C2': (127.821,51.654,1.010)
C2: (132.529,51.150,1.600)
N1: (133.496,51.396,0.708)
N3: (131.227,50.962,1.401)
N6: (134.136,51.685,-1.492)
N7: (131.131,51.395,-2.153)
N9: (129.699,50.911,-0.487)
O5': (126.376,51.821,-2.703)
O3': (125.572,52.644,0.716)
C4: (124.890,57.998,-1.337)
N3: (126.175,57.837,-0.887)
OP1: (124.598,54.006,-8.562)
OP2: (122.913,54.887,-6.841)
C2: (127.217,57.277,-1.572)
C1': (127.964,56.160,-3.583)
C3': (127.231,54.063,-4.405)
O5': (125.361,55.006,-6.394)
O4': (127.670,56.280,-4.965)
C5': (126.731,54.949,-6.771)
P: (124.227,54.993,-7.513)
C4': (127.625,54.961,-5.558)
C2': (128.041,54.666,-3.257)
O2': (129.406,54.277,-3.227)
N1: (126.903,56.823,-2.823)
O4: (124.092,58.608,-0.652)
O2: (128.336,57.193,-1.107)
C6: (125.645,56.965,-3.332)
C5: (124.654,57.520,-2.649)
O3': (127.611,52.726,-4.687)
N3: (126.175,57.837,-0.887)
OP1: (124.598,54.006,-8.562)
OP2: (122.913,54.887,-6.841)
C2: (127.217,57.277,-1.572)
C1': (127.964,56.160,-3.583)
C3': (127.231,54.063,-4.405)
O5': (125.361,55.006,-6.394)
O4': (127.670,56.280,-4.965)
C5': (126.731,54.949,-6.771)
P: (124.227,54.993,-7.513)
C4': (127.625,54.961,-5.558)
C2': (128.041,54.666,-3.257)
O2': (129.406,54.277,-3.227)
N1: (126.903,56.823,-2.823)
O4: (124.092,58.608,-0.652)
O2: (128.336,57.193,-1.107)
C6: (125.645,56.965,-3.332)
C5: (124.654,57.520,-2.649)
O3': (127.611,52.726,-4.687)
Image (generated by PyMOL):