ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UUA:A123:A122

Extra

PDB:
ATOM 1 O3' U A 122 107.839 61.770 -6.421 1.00 48.42 O
ATOM 2 P A A 123 106.332 61.587 -5.910 1.00 49.02 P
ATOM 3 OP1 A A 123 105.554 60.977 -7.027 1.00 48.55 O
ATOM 4 OP2 A A 123 105.914 62.889 -5.339 1.00 48.60 O
ATOM 5 O5' A A 123 106.457 60.530 -4.730 1.00 49.10 O
ATOM 6 C5' A A 123 106.725 59.129 -4.974 1.00 47.80 C
ATOM 7 C4' A A 123 107.412 58.523 -3.772 1.00 47.09 C
ATOM 8 O4' A A 123 108.778 58.994 -3.724 1.00 48.37 O
ATOM 9 C3' A A 123 106.800 58.929 -2.441 1.00 47.10 C
ATOM 10 O3' A A 123 105.761 58.051 -2.078 1.00 48.08 O
ATOM 11 C2' A A 123 107.978 58.867 -1.478 1.00 47.53 C
ATOM 12 O2' A A 123 108.199 57.585 -0.936 1.00 47.95 O
ATOM 13 C1' A A 123 109.152 59.261 -2.382 1.00 47.78 C
ATOM 14 N9 A A 123 109.534 60.675 -2.286 1.00 47.04 N
ATOM 15 C8 A A 123 109.361 61.641 -3.242 1.00 45.04 C
ATOM 16 N7 A A 123 109.780 62.824 -2.876 1.00 46.36 N
ATOM 17 C5 A A 123 110.270 62.629 -1.594 1.00 45.16 C
ATOM 18 C6 A A 123 110.849 63.509 -0.654 1.00 45.57 C
ATOM 19 N6 A A 123 111.026 64.815 -0.868 1.00 46.09 N
ATOM 20 N1 A A 123 111.236 62.995 0.532 1.00 44.87 N
ATOM 21 C2 A A 123 111.042 61.693 0.754 1.00 45.48 C
ATOM 22 N3 A A 123 110.502 60.769 -0.044 1.00 47.18 N
ATOM 23 C4 A A 123 110.132 61.309 -1.218 1.00 46.35 C
ATOM 24 P C A 124 104.358 58.634 -1.550 1.00 48.77 P
ATOM 25 OP1 C A 124 103.529 57.420 -1.323 1.00 47.94 O
ATOM 26 OP2 C A 124 103.870 59.694 -2.450 1.00 48.21 O
ATOM 27 O5' C A 124 104.720 59.271 -0.169 1.00 46.76 O
TER

ATOM 1 O3' C B 121 107.818 61.594 -12.567 1.00 48.46 O
ATOM 2 P U B 122 106.662 61.689 -11.452 1.00 47.61 P
ATOM 3 OP1 U B 122 106.311 60.286 -11.134 1.00 49.14 O
ATOM 4 OP2 U B 122 105.599 62.628 -11.869 1.00 46.01 O
ATOM 5 O5' U B 122 107.408 62.246 -10.194 1.00 45.91 O
ATOM 6 C5' U B 122 108.427 61.475 -9.575 1.00 45.56 C
ATOM 7 C4' U B 122 109.056 62.259 -8.470 1.00 45.94 C
ATOM 8 O4' U B 122 109.596 63.478 -9.026 1.00 46.72 O
ATOM 9 C3' U B 122 108.118 62.747 -7.385 1.00 46.90 C
ATOM 10 O3' U B 122 107.839 61.770 -6.421 1.00 48.42 O
ATOM 11 C2' U B 122 108.874 63.937 -6.810 1.00 47.39 C
ATOM 12 O2' U B 122 109.899 63.580 -5.900 1.00 46.39 O
ATOM 13 C1' U B 122 109.505 64.524 -8.070 1.00 46.72 C
ATOM 14 N1 U B 122 108.712 65.631 -8.632 1.00 46.13 N
ATOM 15 C2 U B 122 108.627 66.794 -7.888 1.00 45.45 C
ATOM 16 O2 U B 122 109.175 66.934 -6.817 1.00 44.67 O
ATOM 17 N3 U B 122 107.875 67.790 -8.450 1.00 47.17 N
ATOM 18 C4 U B 122 107.214 67.753 -9.657 1.00 48.34 C
ATOM 19 O4 U B 122 106.577 68.742 -10.027 1.00 49.69 O
ATOM 20 C5 U B 122 107.349 66.519 -10.374 1.00 47.41 C
ATOM 21 C6 U B 122 108.074 65.526 -9.850 1.00 46.63 C
ATOM 22 P A B 123 106.332 61.587 -5.910 1.00 49.02 P
ATOM 23 OP1 A B 123 105.554 60.977 -7.027 1.00 48.55 O
ATOM 24 OP2 A B 123 105.914 62.889 -5.339 1.00 48.60 O
ATOM 25 O5' A B 123 106.457 60.530 -4.730 1.00 49.10 O
TER

Atoms:
OP1: (105.554,60.977,-7.027)
OP2: (105.914,62.889,-5.339)
C3': (106.800,58.929,-2.441)
C1': (109.152,59.261,-2.382)
C5': (106.725,59.129,-4.974)
O4': (108.778,58.994,-3.724)
C8: (109.361,61.641,-3.242)
O2': (108.199,57.585,-0.936)
C6: (110.849,63.509,-0.654)
C5: (110.270,62.629,-1.594)
C4: (110.132,61.309,-1.218)
P: (106.332,61.587,-5.910)
C4': (107.412,58.523,-3.772)
C2': (107.978,58.867,-1.478)
C2: (111.042,61.693,0.754)
N1: (111.236,62.995,0.532)
N3: (110.502,60.769,-0.044)
N6: (111.026,64.815,-0.868)
N7: (109.780,62.824,-2.876)
N9: (109.534,60.675,-2.286)
O5': (106.457,60.530,-4.730)
O3': (105.761,58.051,-2.078)
C4: (107.214,67.753,-9.657)
N3: (107.875,67.790,-8.450)
OP1: (106.311,60.286,-11.134)
OP2: (105.599,62.628,-11.869)
C2: (108.627,66.794,-7.888)
C1': (109.505,64.524,-8.070)
C3': (108.118,62.747,-7.385)
O5': (107.408,62.246,-10.194)
O4': (109.596,63.478,-9.026)
C5': (108.427,61.475,-9.575)
P: (106.662,61.689,-11.452)
C4': (109.056,62.259,-8.470)
C2': (108.874,63.937,-6.810)
O2': (109.899,63.580,-5.900)
N1: (108.712,65.631,-8.632)
O4: (106.577,68.742,-10.027)
O2: (109.175,66.934,-6.817)
C6: (108.074,65.526,-9.850)
C5: (107.349,66.519,-10.374)
O3': (107.839,61.770,-6.421)
Image (generated by PyMOL):
PyMOL image
show in jmol