ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:933:932

Extra

PDB:
ATOM 1 O3' U A 32 86.611 8.898 89.030 1.00 86.23 O
ATOM 2 P A A 33 87.855 8.250 88.261 1.00 85.71 P
ATOM 3 OP1 A A 33 88.388 7.168 89.128 1.00 86.28 O
ATOM 4 OP2 A A 33 88.749 9.348 87.816 1.00 85.61 O
ATOM 5 O5' A A 33 87.192 7.574 86.986 1.00 83.95 O
ATOM 6 C5' A A 33 87.969 6.790 86.077 1.00 82.68 C
ATOM 7 C4' A A 33 87.230 6.656 84.775 1.00 82.23 C
ATOM 8 O4' A A 33 86.000 5.912 84.997 1.00 82.35 O
ATOM 9 C3' A A 33 86.773 7.982 84.198 1.00 81.53 C
ATOM 10 O3' A A 33 87.818 8.629 83.473 1.00 82.93 O
ATOM 11 C2' A A 33 85.562 7.571 83.373 1.00 81.06 C
ATOM 12 O2' A A 33 85.913 6.961 82.144 1.00 79.60 O
ATOM 13 C1' A A 33 84.929 6.530 84.299 1.00 80.43 C
ATOM 14 N9 A A 33 84.022 7.109 85.299 1.00 78.89 N
ATOM 15 C8 A A 33 84.346 7.534 86.570 1.00 77.89 C
ATOM 16 N7 A A 33 83.329 8.011 87.245 1.00 77.43 N
ATOM 17 C5 A A 33 82.261 7.895 86.366 1.00 76.73 C
ATOM 18 C6 A A 33 80.895 8.227 86.486 1.00 75.88 C
ATOM 19 N6 A A 33 80.355 8.769 87.582 1.00 74.45 N
ATOM 20 N1 A A 33 80.095 7.979 85.426 1.00 75.16 N
ATOM 21 C2 A A 33 80.638 7.436 84.326 1.00 75.80 C
ATOM 22 N3 A A 33 81.903 7.082 84.092 1.00 75.70 N
ATOM 23 C4 A A 33 82.673 7.341 85.163 1.00 76.95 C
ATOM 24 P C A 34 87.597 10.124 82.924 1.00 81.88 P
ATOM 25 OP1 C A 34 88.872 10.594 82.318 1.00 81.38 O
ATOM 26 OP2 C A 34 86.954 10.935 83.998 1.00 80.83 O
ATOM 27 O5' C A 34 86.553 9.896 81.746 1.00 78.37 O
TER

ATOM 1 O3' G B 31 84.773 7.008 95.798 1.00 84.73 O
ATOM 2 P U B 32 85.938 7.889 95.130 1.00 85.81 P
ATOM 3 OP1 U B 32 87.238 7.252 95.457 1.00 86.71 O
ATOM 4 OP2 U B 32 85.724 9.322 95.469 1.00 86.59 O
ATOM 5 O5' U B 32 85.693 7.700 93.571 1.00 85.30 O
ATOM 6 C5' U B 32 86.619 8.247 92.633 1.00 86.85 C
ATOM 7 C4' U B 32 85.979 8.403 91.278 1.00 86.93 C
ATOM 8 O4' U B 32 84.658 9.001 91.403 1.00 87.81 O
ATOM 9 C3' U B 32 86.772 9.325 90.368 1.00 87.23 C
ATOM 10 O3' U B 32 86.611 8.898 89.030 1.00 86.23 O
ATOM 11 C2' U B 32 86.106 10.674 90.609 1.00 87.49 C
ATOM 12 O2' U B 32 86.295 11.594 89.552 1.00 88.47 O
ATOM 13 C1' U B 32 84.641 10.261 90.753 1.00 87.70 C
ATOM 14 N1 U B 32 83.846 11.197 91.567 1.00 87.07 N
ATOM 15 C2 U B 32 82.929 12.016 90.919 1.00 86.03 C
ATOM 16 O2 U B 32 82.736 11.983 89.711 1.00 85.14 O
ATOM 17 N3 U B 32 82.245 12.878 91.742 1.00 85.41 N
ATOM 18 C4 U B 32 82.379 13.007 93.112 1.00 85.76 C
ATOM 19 O4 U B 32 81.743 13.880 93.704 1.00 85.92 O
ATOM 20 C5 U B 32 83.329 12.122 93.705 1.00 86.27 C
ATOM 21 C6 U B 32 84.013 11.270 92.936 1.00 87.20 C
ATOM 22 P A B 33 87.855 8.250 88.261 1.00 85.71 P
ATOM 23 OP1 A B 33 88.388 7.168 89.128 1.00 86.28 O
ATOM 24 OP2 A B 33 88.749 9.348 87.816 1.00 85.61 O
ATOM 25 O5' A B 33 87.192 7.574 86.986 1.00 83.95 O
TER

Atoms:
OP1: (88.388,7.168,89.128)
OP2: (88.749,9.348,87.816)
C3': (86.773,7.982,84.198)
C1': (84.929,6.530,84.299)
C5': (87.969,6.790,86.077)
O4': (86.000,5.912,84.997)
C8: (84.346,7.534,86.570)
O2': (85.913,6.961,82.144)
C6: (80.895,8.227,86.486)
C5: (82.261,7.895,86.366)
C4: (82.673,7.341,85.163)
P: (87.855,8.250,88.261)
C4': (87.230,6.656,84.775)
C2': (85.562,7.571,83.373)
C2: (80.638,7.436,84.326)
N1: (80.095,7.979,85.426)
N3: (81.903,7.082,84.092)
N6: (80.355,8.769,87.582)
N7: (83.329,8.011,87.245)
N9: (84.022,7.109,85.299)
O5': (87.192,7.574,86.986)
O3': (87.818,8.629,83.473)
C4: (82.379,13.007,93.112)
N3: (82.245,12.878,91.742)
OP1: (87.238,7.252,95.457)
OP2: (85.724,9.322,95.469)
C2: (82.929,12.016,90.919)
C1': (84.641,10.261,90.753)
C3': (86.772,9.325,90.368)
O5': (85.693,7.700,93.571)
O4': (84.658,9.001,91.403)
C5': (86.619,8.247,92.633)
P: (85.938,7.889,95.130)
C4': (85.979,8.403,91.278)
C2': (86.106,10.674,90.609)
O2': (86.295,11.594,89.552)
N1: (83.846,11.197,91.567)
O4: (81.743,13.880,93.704)
O2: (82.736,11.983,89.711)
C6: (84.013,11.270,92.936)
C5: (83.329,12.122,93.705)
O3': (86.611,8.898,89.030)
Image (generated by PyMOL):
PyMOL image
show in jmol