Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:51025:51024
Extra
PDB:
ATOM 1 O3' U A1024 119.378 -82.096 249.880 1.00 62.78 O
ATOM 2 P A A1025 120.313 -83.225 250.533 1.00 66.64 P
ATOM 3 OP1 A A1025 120.448 -84.327 249.540 1.00 67.17 O
ATOM 4 OP2 A A1025 119.756 -83.533 251.881 1.00 66.82 O
ATOM 5 O5' A A1025 121.688 -82.460 250.679 1.00 66.09 O
ATOM 6 C5' A A1025 122.912 -83.156 250.740 1.00 66.25 C
ATOM 7 C4' A A1025 123.974 -82.392 250.027 1.00 65.80 C
ATOM 8 O4' A A1025 123.648 -82.370 248.625 1.00 65.88 O
ATOM 9 C3' A A1025 124.116 -80.938 250.456 1.00 65.10 C
ATOM 10 O3' A A1025 125.468 -80.557 250.328 1.00 64.77 O
ATOM 11 C2' A A1025 123.298 -80.194 249.418 1.00 64.90 C
ATOM 12 O2' A A1025 123.687 -78.839 249.220 1.00 64.26 O
ATOM 13 C1' A A1025 123.543 -81.048 248.175 1.00 65.31 C
ATOM 14 N9 A A1025 122.461 -81.002 247.195 1.00 65.48 N
ATOM 15 C8 A A1025 121.108 -81.150 247.346 1.00 65.71 C
ATOM 16 N7 A A1025 120.477 -81.047 246.205 1.00 65.82 N
ATOM 17 C5 A A1025 121.470 -80.822 245.256 1.00 65.64 C
ATOM 18 C6 A A1025 121.488 -80.619 243.846 1.00 65.64 C
ATOM 19 N6 A A1025 120.409 -80.596 243.063 1.00 65.83 N
ATOM 20 N1 A A1025 122.683 -80.416 243.228 1.00 65.44 N
ATOM 21 C2 A A1025 123.788 -80.435 243.985 1.00 65.26 C
ATOM 22 N3 A A1025 123.905 -80.619 245.301 1.00 65.24 N
ATOM 23 C4 A A1025 122.699 -80.801 245.869 1.00 65.43 C
ATOM 24 P C A1026 126.496 -80.843 251.515 1.00 53.46 P
ATOM 25 OP1 C A1026 127.815 -81.093 250.880 1.00 53.45 O
ATOM 26 OP2 C A1026 125.888 -81.916 252.390 1.00 53.99 O
ATOM 27 O5' C A1026 126.523 -79.452 252.307 1.00 52.81 O
TER
ATOM 1 O3' U B1023 113.340 -81.830 250.617 1.00 64.24 O
ATOM 2 P U B1024 114.589 -82.821 250.705 1.00 63.82 P
ATOM 3 OP1 U B1024 114.656 -83.589 249.426 1.00 64.21 O
ATOM 4 OP2 U B1024 114.466 -83.574 251.984 1.00 64.15 O
ATOM 5 O5' U B1024 115.796 -81.793 250.784 1.00 63.15 O
ATOM 6 C5' U B1024 116.317 -81.180 249.622 1.00 62.83 C
ATOM 7 C4' U B1024 117.586 -80.445 249.947 1.00 62.29 C
ATOM 8 O4' U B1024 117.289 -79.340 250.835 1.00 61.81 O
ATOM 9 C3' U B1024 118.622 -81.240 250.712 1.00 62.47 C
ATOM 10 O3' U B1024 119.378 -82.096 249.880 1.00 62.78 O
ATOM 11 C2' U B1024 119.442 -80.156 251.406 1.00 61.84 C
ATOM 12 O2' U B1024 120.359 -79.570 250.498 1.00 61.48 O
ATOM 13 C1' U B1024 118.371 -79.119 251.714 1.00 61.53 C
ATOM 14 N1 U B1024 117.871 -79.204 253.077 1.00 61.61 N
ATOM 15 C2 U B1024 118.335 -78.285 254.003 1.00 61.12 C
ATOM 16 O2 U B1024 119.187 -77.429 253.793 1.00 60.62 O
ATOM 17 N3 U B1024 117.759 -78.417 255.236 1.00 61.25 N
ATOM 18 C4 U B1024 116.802 -79.333 255.604 1.00 61.80 C
ATOM 19 O4 U B1024 116.386 -79.332 256.752 1.00 61.86 O
ATOM 20 C5 U B1024 116.374 -80.211 254.573 1.00 62.26 C
ATOM 21 C6 U B1024 116.896 -80.109 253.362 1.00 62.15 C
ATOM 22 P A B1025 120.313 -83.225 250.533 1.00 66.64 P
ATOM 23 OP1 A B1025 120.448 -84.327 249.540 1.00 67.17 O
ATOM 24 OP2 A B1025 119.756 -83.533 251.881 1.00 66.82 O
ATOM 25 O5' A B1025 121.688 -82.460 250.679 1.00 66.09 O
TER
ATOM 2 P A A1025 120.313 -83.225 250.533 1.00 66.64 P
ATOM 3 OP1 A A1025 120.448 -84.327 249.540 1.00 67.17 O
ATOM 4 OP2 A A1025 119.756 -83.533 251.881 1.00 66.82 O
ATOM 5 O5' A A1025 121.688 -82.460 250.679 1.00 66.09 O
ATOM 6 C5' A A1025 122.912 -83.156 250.740 1.00 66.25 C
ATOM 7 C4' A A1025 123.974 -82.392 250.027 1.00 65.80 C
ATOM 8 O4' A A1025 123.648 -82.370 248.625 1.00 65.88 O
ATOM 9 C3' A A1025 124.116 -80.938 250.456 1.00 65.10 C
ATOM 10 O3' A A1025 125.468 -80.557 250.328 1.00 64.77 O
ATOM 11 C2' A A1025 123.298 -80.194 249.418 1.00 64.90 C
ATOM 12 O2' A A1025 123.687 -78.839 249.220 1.00 64.26 O
ATOM 13 C1' A A1025 123.543 -81.048 248.175 1.00 65.31 C
ATOM 14 N9 A A1025 122.461 -81.002 247.195 1.00 65.48 N
ATOM 15 C8 A A1025 121.108 -81.150 247.346 1.00 65.71 C
ATOM 16 N7 A A1025 120.477 -81.047 246.205 1.00 65.82 N
ATOM 17 C5 A A1025 121.470 -80.822 245.256 1.00 65.64 C
ATOM 18 C6 A A1025 121.488 -80.619 243.846 1.00 65.64 C
ATOM 19 N6 A A1025 120.409 -80.596 243.063 1.00 65.83 N
ATOM 20 N1 A A1025 122.683 -80.416 243.228 1.00 65.44 N
ATOM 21 C2 A A1025 123.788 -80.435 243.985 1.00 65.26 C
ATOM 22 N3 A A1025 123.905 -80.619 245.301 1.00 65.24 N
ATOM 23 C4 A A1025 122.699 -80.801 245.869 1.00 65.43 C
ATOM 24 P C A1026 126.496 -80.843 251.515 1.00 53.46 P
ATOM 25 OP1 C A1026 127.815 -81.093 250.880 1.00 53.45 O
ATOM 26 OP2 C A1026 125.888 -81.916 252.390 1.00 53.99 O
ATOM 27 O5' C A1026 126.523 -79.452 252.307 1.00 52.81 O
TER
ATOM 1 O3' U B1023 113.340 -81.830 250.617 1.00 64.24 O
ATOM 2 P U B1024 114.589 -82.821 250.705 1.00 63.82 P
ATOM 3 OP1 U B1024 114.656 -83.589 249.426 1.00 64.21 O
ATOM 4 OP2 U B1024 114.466 -83.574 251.984 1.00 64.15 O
ATOM 5 O5' U B1024 115.796 -81.793 250.784 1.00 63.15 O
ATOM 6 C5' U B1024 116.317 -81.180 249.622 1.00 62.83 C
ATOM 7 C4' U B1024 117.586 -80.445 249.947 1.00 62.29 C
ATOM 8 O4' U B1024 117.289 -79.340 250.835 1.00 61.81 O
ATOM 9 C3' U B1024 118.622 -81.240 250.712 1.00 62.47 C
ATOM 10 O3' U B1024 119.378 -82.096 249.880 1.00 62.78 O
ATOM 11 C2' U B1024 119.442 -80.156 251.406 1.00 61.84 C
ATOM 12 O2' U B1024 120.359 -79.570 250.498 1.00 61.48 O
ATOM 13 C1' U B1024 118.371 -79.119 251.714 1.00 61.53 C
ATOM 14 N1 U B1024 117.871 -79.204 253.077 1.00 61.61 N
ATOM 15 C2 U B1024 118.335 -78.285 254.003 1.00 61.12 C
ATOM 16 O2 U B1024 119.187 -77.429 253.793 1.00 60.62 O
ATOM 17 N3 U B1024 117.759 -78.417 255.236 1.00 61.25 N
ATOM 18 C4 U B1024 116.802 -79.333 255.604 1.00 61.80 C
ATOM 19 O4 U B1024 116.386 -79.332 256.752 1.00 61.86 O
ATOM 20 C5 U B1024 116.374 -80.211 254.573 1.00 62.26 C
ATOM 21 C6 U B1024 116.896 -80.109 253.362 1.00 62.15 C
ATOM 22 P A B1025 120.313 -83.225 250.533 1.00 66.64 P
ATOM 23 OP1 A B1025 120.448 -84.327 249.540 1.00 67.17 O
ATOM 24 OP2 A B1025 119.756 -83.533 251.881 1.00 66.82 O
ATOM 25 O5' A B1025 121.688 -82.460 250.679 1.00 66.09 O
TER
Atoms:
OP1: (120.448,-84.327,249.540)
OP2: (119.756,-83.533,251.881)
C3': (124.116,-80.938,250.456)
C1': (123.543,-81.048,248.175)
C5': (122.912,-83.156,250.740)
O4': (123.648,-82.370,248.625)
C8: (121.108,-81.150,247.346)
O2': (123.687,-78.839,249.220)
C6: (121.488,-80.619,243.846)
C5: (121.470,-80.822,245.256)
C4: (122.699,-80.801,245.869)
P: (120.313,-83.225,250.533)
C4': (123.974,-82.392,250.027)
C2': (123.298,-80.194,249.418)
C2: (123.788,-80.435,243.985)
N1: (122.683,-80.416,243.228)
N3: (123.905,-80.619,245.301)
N6: (120.409,-80.596,243.063)
N7: (120.477,-81.047,246.205)
N9: (122.461,-81.002,247.195)
O5': (121.688,-82.460,250.679)
O3': (125.468,-80.557,250.328)
OP2: (119.756,-83.533,251.881)
C3': (124.116,-80.938,250.456)
C1': (123.543,-81.048,248.175)
C5': (122.912,-83.156,250.740)
O4': (123.648,-82.370,248.625)
C8: (121.108,-81.150,247.346)
O2': (123.687,-78.839,249.220)
C6: (121.488,-80.619,243.846)
C5: (121.470,-80.822,245.256)
C4: (122.699,-80.801,245.869)
P: (120.313,-83.225,250.533)
C4': (123.974,-82.392,250.027)
C2': (123.298,-80.194,249.418)
C2: (123.788,-80.435,243.985)
N1: (122.683,-80.416,243.228)
N3: (123.905,-80.619,245.301)
N6: (120.409,-80.596,243.063)
N7: (120.477,-81.047,246.205)
N9: (122.461,-81.002,247.195)
O5': (121.688,-82.460,250.679)
O3': (125.468,-80.557,250.328)
C4: (116.802,-79.333,255.604)
N3: (117.759,-78.417,255.236)
OP1: (114.656,-83.589,249.426)
OP2: (114.466,-83.574,251.984)
C2: (118.335,-78.285,254.003)
C1': (118.371,-79.119,251.714)
C3': (118.622,-81.240,250.712)
O5': (115.796,-81.793,250.784)
O4': (117.289,-79.340,250.835)
C5': (116.317,-81.180,249.622)
P: (114.589,-82.821,250.705)
C4': (117.586,-80.445,249.947)
C2': (119.442,-80.156,251.406)
O2': (120.359,-79.570,250.498)
N1: (117.871,-79.204,253.077)
O4: (116.386,-79.332,256.752)
O2: (119.187,-77.429,253.793)
C6: (116.896,-80.109,253.362)
C5: (116.374,-80.211,254.573)
O3': (119.378,-82.096,249.880)
N3: (117.759,-78.417,255.236)
OP1: (114.656,-83.589,249.426)
OP2: (114.466,-83.574,251.984)
C2: (118.335,-78.285,254.003)
C1': (118.371,-79.119,251.714)
C3': (118.622,-81.240,250.712)
O5': (115.796,-81.793,250.784)
O4': (117.289,-79.340,250.835)
C5': (116.317,-81.180,249.622)
P: (114.589,-82.821,250.705)
C4': (117.586,-80.445,249.947)
C2': (119.442,-80.156,251.406)
O2': (120.359,-79.570,250.498)
N1: (117.871,-79.204,253.077)
O4: (116.386,-79.332,256.752)
O2: (119.187,-77.429,253.793)
C6: (116.896,-80.109,253.362)
C5: (116.374,-80.211,254.573)
O3': (119.378,-82.096,249.880)
Image (generated by PyMOL):