ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1746:A1745

Extra

PDB:
ATOM 1 O3' U A1745 -53.096 -4.174 28.147 1.00 0.79 O
ATOM 2 P A A1746 -52.906 -5.334 27.036 1.00 6.83 P
ATOM 3 OP1 A A1746 -51.646 -5.158 26.261 1.00 6.83 O
ATOM 4 OP2 A A1746 -54.200 -5.538 26.305 1.00 6.83 O
ATOM 5 O5' A A1746 -52.653 -6.576 27.988 1.00 1.61 O
ATOM 6 C5' A A1746 -51.553 -6.553 28.907 1.00 1.61 C
ATOM 7 C4' A A1746 -51.999 -6.984 30.282 1.00 1.61 C
ATOM 8 O4' A A1746 -52.840 -5.987 30.913 1.00 1.61 O
ATOM 9 C3' A A1746 -52.831 -8.244 30.351 1.00 1.61 C
ATOM 10 O3' A A1746 -52.011 -9.380 30.226 1.00 1.61 O
ATOM 11 C2' A A1746 -53.501 -8.118 31.714 1.00 1.61 C
ATOM 12 O2' A A1746 -52.630 -8.469 32.770 1.00 1.61 O
ATOM 13 C1' A A1746 -53.750 -6.619 31.794 1.00 1.61 C
ATOM 14 N9 A A1746 -55.103 -6.256 31.393 1.00 1.13 N
ATOM 15 C8 A A1746 -55.514 -5.656 30.227 1.00 1.13 C
ATOM 16 N7 A A1746 -56.800 -5.375 30.202 1.00 1.13 N
ATOM 17 C5 A A1746 -57.257 -5.841 31.419 1.00 1.13 C
ATOM 18 C6 A A1746 -58.506 -5.815 31.998 1.00 1.13 C
ATOM 19 N6 A A1746 -59.563 -5.263 31.418 1.00 1.13 N
ATOM 20 N1 A A1746 -58.649 -6.369 33.214 1.00 1.13 N
ATOM 21 C2 A A1746 -57.572 -6.901 33.799 1.00 1.13 C
ATOM 22 N3 A A1746 -56.322 -6.967 33.356 1.00 1.13 N
ATOM 23 C4 A A1746 -56.233 -6.411 32.147 1.00 1.13 C
ATOM 24 P G A1747 -52.510 -10.599 29.327 1.00 0.79 P
ATOM 25 OP1 G A1747 -51.268 -11.219 28.791 1.00 0.79 O
ATOM 26 OP2 G A1747 -53.559 -10.109 28.379 1.00 0.79 O
ATOM 27 O5' G A1747 -53.216 -11.554 30.402 1.00 11.28 O
TER

ATOM 1 O3' A B1744 -56.028 -0.346 30.721 1.00 0.84 O
ATOM 2 P U B1745 -56.763 -0.589 29.333 1.00 27.40 P
ATOM 3 OP1 U B1745 -57.205 0.723 28.807 1.00 44.29 O
ATOM 4 OP2 U B1745 -57.742 -1.686 29.466 1.00 44.29 O
ATOM 5 O5' U B1745 -55.573 -1.085 28.418 1.00 0.79 O
ATOM 6 C5' U B1745 -55.767 -2.171 27.529 1.00 0.79 C
ATOM 7 C4' U B1745 -54.475 -2.503 26.846 1.00 0.79 C
ATOM 8 O4' U B1745 -54.044 -1.382 26.041 1.00 0.79 O
ATOM 9 C3' U B1745 -53.331 -2.820 27.771 1.00 0.79 C
ATOM 10 O3' U B1745 -53.096 -4.174 28.147 1.00 0.79 O
ATOM 11 C2' U B1745 -52.290 -1.726 27.599 1.00 0.79 C
ATOM 12 O2' U B1745 -50.998 -2.248 27.450 1.00 0.79 O
ATOM 13 C1' U B1745 -52.683 -1.121 26.254 1.00 0.79 C
ATOM 14 N1 U B1745 -52.555 0.335 26.203 1.00 13.32 N
ATOM 15 C2 U B1745 -51.739 0.892 25.229 1.00 13.32 C
ATOM 16 O2 U B1745 -51.074 0.233 24.460 1.00 13.32 O
ATOM 17 N3 U B1745 -51.737 2.259 25.188 1.00 13.32 N
ATOM 18 C4 U B1745 -52.452 3.107 26.003 1.00 13.32 C
ATOM 19 O4 U B1745 -52.465 4.314 25.756 1.00 13.32 O
ATOM 20 C5 U B1745 -53.238 2.449 27.010 1.00 13.32 C
ATOM 21 C6 U B1745 -53.257 1.123 27.075 1.00 13.32 C
ATOM 22 P A B1746 -52.906 -5.334 27.036 1.00 6.83 P
ATOM 23 OP1 A B1746 -51.646 -5.158 26.261 1.00 6.83 O
ATOM 24 OP2 A B1746 -54.200 -5.538 26.305 1.00 6.83 O
ATOM 25 O5' A B1746 -52.653 -6.576 27.988 1.00 1.61 O
TER

Atoms:
OP1: (-51.646,-5.158,26.261)
OP2: (-54.200,-5.538,26.305)
C3': (-52.831,-8.244,30.351)
C1': (-53.750,-6.619,31.794)
C5': (-51.553,-6.553,28.907)
O4': (-52.840,-5.987,30.913)
C8: (-55.514,-5.656,30.227)
O2': (-52.630,-8.469,32.770)
C6: (-58.506,-5.815,31.998)
C5: (-57.257,-5.841,31.419)
C4: (-56.233,-6.411,32.147)
P: (-52.906,-5.334,27.036)
C4': (-51.999,-6.984,30.282)
C2': (-53.501,-8.118,31.714)
C2: (-57.572,-6.901,33.799)
N1: (-58.649,-6.369,33.214)
N3: (-56.322,-6.967,33.356)
N6: (-59.563,-5.263,31.418)
N7: (-56.800,-5.375,30.202)
N9: (-55.103,-6.256,31.393)
O5': (-52.653,-6.576,27.988)
O3': (-52.011,-9.380,30.226)
C4: (-52.452,3.107,26.003)
N3: (-51.737,2.259,25.188)
OP1: (-57.205,0.723,28.807)
OP2: (-57.742,-1.686,29.466)
C2: (-51.739,0.892,25.229)
C1': (-52.683,-1.121,26.254)
C3': (-53.331,-2.820,27.771)
O5': (-55.573,-1.085,28.418)
O4': (-54.044,-1.382,26.041)
C5': (-55.767,-2.171,27.529)
P: (-56.763,-0.589,29.333)
C4': (-54.475,-2.503,26.846)
C2': (-52.290,-1.726,27.599)
O2': (-50.998,-2.248,27.450)
N1: (-52.555,0.335,26.203)
O4: (-52.465,4.314,25.756)
O2: (-51.074,0.233,24.460)
C6: (-53.257,1.123,27.075)
C5: (-53.238,2.449,27.010)
O3': (-53.096,-4.174,28.147)
Image (generated by PyMOL):
PyMOL image
show in jmol