Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1969:A1968
Extra
PDB:
ATOM 1 O3' U A1968 -18.643 106.887 121.826 1.00 13.86 O
ATOM 2 P A A1969 -18.734 106.014 123.171 1.00 1.50 P
ATOM 3 OP1 A A1969 -19.419 104.742 122.830 1.00 1.50 O
ATOM 4 OP2 A A1969 -19.334 106.891 124.214 1.00 1.50 O
ATOM 5 O5' A A1969 -17.206 105.722 123.519 1.00 1.50 O
ATOM 6 C5' A A1969 -16.482 104.670 122.888 1.00 1.50 C
ATOM 7 C4' A A1969 -15.013 105.009 122.773 1.00 1.50 C
ATOM 8 O4' A A1969 -14.862 106.215 121.981 1.00 1.50 O
ATOM 9 C3' A A1969 -14.290 105.307 124.086 1.00 1.50 C
ATOM 10 O3' A A1969 -13.765 104.136 124.695 1.00 1.50 O
ATOM 11 C2' A A1969 -13.215 106.305 123.671 1.00 1.50 C
ATOM 12 O2' A A1969 -12.082 105.653 123.141 1.00 1.50 O
ATOM 13 C1' A A1969 -13.893 107.061 122.546 1.00 1.50 C
ATOM 14 N9 A A1969 -14.558 108.264 123.051 1.00 1.84 N
ATOM 15 C8 A A1969 -15.890 108.534 123.254 1.00 1.84 C
ATOM 16 N7 A A1969 -16.097 109.724 123.760 1.00 1.84 N
ATOM 17 C5 A A1969 -14.808 110.262 123.911 1.00 1.84 C
ATOM 18 C6 A A1969 -14.321 111.495 124.399 1.00 1.84 C
ATOM 19 N6 A A1969 -15.087 112.507 124.869 1.00 1.84 N
ATOM 20 N1 A A1969 -12.988 111.642 124.400 1.00 1.84 N
ATOM 21 C2 A A1969 -12.215 110.661 123.945 1.00 1.84 C
ATOM 22 N3 A A1969 -12.535 109.483 123.450 1.00 1.84 N
ATOM 23 C4 A A1969 -13.862 109.355 123.477 1.00 1.84 C
ATOM 24 P A A1970 -13.884 103.888 126.286 1.00 7.14 P
ATOM 25 OP1 A A1970 -13.279 102.563 126.562 1.00 7.14 O
ATOM 26 OP2 A A1970 -15.302 104.108 126.663 1.00 7.14 O
ATOM 27 O5' A A1970 -12.984 105.041 126.914 1.00 7.14 O
TER
ATOM 1 O3' G B1967 -24.495 107.675 120.188 1.00 19.07 O
ATOM 2 P U B1968 -23.918 107.141 121.578 1.00 13.86 P
ATOM 3 OP1 U B1968 -24.026 105.665 121.571 1.00 13.86 O
ATOM 4 OP2 U B1968 -24.601 107.902 122.651 1.00 13.86 O
ATOM 5 O5' U B1968 -22.391 107.561 121.508 1.00 13.86 O
ATOM 6 C5' U B1968 -21.550 107.090 120.477 1.00 13.86 C
ATOM 7 C4' U B1968 -20.313 107.924 120.387 1.00 13.86 C
ATOM 8 O4' U B1968 -20.685 109.294 120.131 1.00 13.86 O
ATOM 9 C3' U B1968 -19.486 108.006 121.651 1.00 13.86 C
ATOM 10 O3' U B1968 -18.643 106.887 121.826 1.00 13.86 O
ATOM 11 C2' U B1968 -18.730 109.303 121.466 1.00 13.86 C
ATOM 12 O2' U B1968 -17.612 109.112 120.622 1.00 13.86 O
ATOM 13 C1' U B1968 -19.755 110.158 120.725 1.00 13.86 C
ATOM 14 N1 U B1968 -20.460 111.059 121.630 1.00 10.78 N
ATOM 15 C2 U B1968 -19.891 112.287 121.870 1.00 10.78 C
ATOM 16 O2 U B1968 -18.857 112.617 121.320 1.00 10.78 O
ATOM 17 N3 U B1968 -20.571 113.094 122.747 1.00 10.78 N
ATOM 18 C4 U B1968 -21.746 112.780 123.387 1.00 10.78 C
ATOM 19 O4 U B1968 -22.283 113.566 124.155 1.00 10.78 O
ATOM 20 C5 U B1968 -22.262 111.493 123.086 1.00 10.78 C
ATOM 21 C6 U B1968 -21.612 110.690 122.237 1.00 10.78 C
ATOM 22 P A B1969 -18.734 106.014 123.171 1.00 1.50 P
ATOM 23 OP1 A B1969 -19.419 104.742 122.830 1.00 1.50 O
ATOM 24 OP2 A B1969 -19.334 106.891 124.214 1.00 1.50 O
ATOM 25 O5' A B1969 -17.206 105.722 123.519 1.00 1.50 O
TER
ATOM 2 P A A1969 -18.734 106.014 123.171 1.00 1.50 P
ATOM 3 OP1 A A1969 -19.419 104.742 122.830 1.00 1.50 O
ATOM 4 OP2 A A1969 -19.334 106.891 124.214 1.00 1.50 O
ATOM 5 O5' A A1969 -17.206 105.722 123.519 1.00 1.50 O
ATOM 6 C5' A A1969 -16.482 104.670 122.888 1.00 1.50 C
ATOM 7 C4' A A1969 -15.013 105.009 122.773 1.00 1.50 C
ATOM 8 O4' A A1969 -14.862 106.215 121.981 1.00 1.50 O
ATOM 9 C3' A A1969 -14.290 105.307 124.086 1.00 1.50 C
ATOM 10 O3' A A1969 -13.765 104.136 124.695 1.00 1.50 O
ATOM 11 C2' A A1969 -13.215 106.305 123.671 1.00 1.50 C
ATOM 12 O2' A A1969 -12.082 105.653 123.141 1.00 1.50 O
ATOM 13 C1' A A1969 -13.893 107.061 122.546 1.00 1.50 C
ATOM 14 N9 A A1969 -14.558 108.264 123.051 1.00 1.84 N
ATOM 15 C8 A A1969 -15.890 108.534 123.254 1.00 1.84 C
ATOM 16 N7 A A1969 -16.097 109.724 123.760 1.00 1.84 N
ATOM 17 C5 A A1969 -14.808 110.262 123.911 1.00 1.84 C
ATOM 18 C6 A A1969 -14.321 111.495 124.399 1.00 1.84 C
ATOM 19 N6 A A1969 -15.087 112.507 124.869 1.00 1.84 N
ATOM 20 N1 A A1969 -12.988 111.642 124.400 1.00 1.84 N
ATOM 21 C2 A A1969 -12.215 110.661 123.945 1.00 1.84 C
ATOM 22 N3 A A1969 -12.535 109.483 123.450 1.00 1.84 N
ATOM 23 C4 A A1969 -13.862 109.355 123.477 1.00 1.84 C
ATOM 24 P A A1970 -13.884 103.888 126.286 1.00 7.14 P
ATOM 25 OP1 A A1970 -13.279 102.563 126.562 1.00 7.14 O
ATOM 26 OP2 A A1970 -15.302 104.108 126.663 1.00 7.14 O
ATOM 27 O5' A A1970 -12.984 105.041 126.914 1.00 7.14 O
TER
ATOM 1 O3' G B1967 -24.495 107.675 120.188 1.00 19.07 O
ATOM 2 P U B1968 -23.918 107.141 121.578 1.00 13.86 P
ATOM 3 OP1 U B1968 -24.026 105.665 121.571 1.00 13.86 O
ATOM 4 OP2 U B1968 -24.601 107.902 122.651 1.00 13.86 O
ATOM 5 O5' U B1968 -22.391 107.561 121.508 1.00 13.86 O
ATOM 6 C5' U B1968 -21.550 107.090 120.477 1.00 13.86 C
ATOM 7 C4' U B1968 -20.313 107.924 120.387 1.00 13.86 C
ATOM 8 O4' U B1968 -20.685 109.294 120.131 1.00 13.86 O
ATOM 9 C3' U B1968 -19.486 108.006 121.651 1.00 13.86 C
ATOM 10 O3' U B1968 -18.643 106.887 121.826 1.00 13.86 O
ATOM 11 C2' U B1968 -18.730 109.303 121.466 1.00 13.86 C
ATOM 12 O2' U B1968 -17.612 109.112 120.622 1.00 13.86 O
ATOM 13 C1' U B1968 -19.755 110.158 120.725 1.00 13.86 C
ATOM 14 N1 U B1968 -20.460 111.059 121.630 1.00 10.78 N
ATOM 15 C2 U B1968 -19.891 112.287 121.870 1.00 10.78 C
ATOM 16 O2 U B1968 -18.857 112.617 121.320 1.00 10.78 O
ATOM 17 N3 U B1968 -20.571 113.094 122.747 1.00 10.78 N
ATOM 18 C4 U B1968 -21.746 112.780 123.387 1.00 10.78 C
ATOM 19 O4 U B1968 -22.283 113.566 124.155 1.00 10.78 O
ATOM 20 C5 U B1968 -22.262 111.493 123.086 1.00 10.78 C
ATOM 21 C6 U B1968 -21.612 110.690 122.237 1.00 10.78 C
ATOM 22 P A B1969 -18.734 106.014 123.171 1.00 1.50 P
ATOM 23 OP1 A B1969 -19.419 104.742 122.830 1.00 1.50 O
ATOM 24 OP2 A B1969 -19.334 106.891 124.214 1.00 1.50 O
ATOM 25 O5' A B1969 -17.206 105.722 123.519 1.00 1.50 O
TER
Atoms:
OP1: (-19.419,104.742,122.830)
OP2: (-19.334,106.891,124.214)
C3': (-14.290,105.307,124.086)
C1': (-13.893,107.061,122.546)
C5': (-16.482,104.670,122.888)
O4': (-14.862,106.215,121.981)
C8: (-15.890,108.534,123.254)
O2': (-12.082,105.653,123.141)
C6: (-14.321,111.495,124.399)
C5: (-14.808,110.262,123.911)
C4: (-13.862,109.355,123.477)
P: (-18.734,106.014,123.171)
C4': (-15.013,105.009,122.773)
C2': (-13.215,106.305,123.671)
C2: (-12.215,110.661,123.945)
N1: (-12.988,111.642,124.400)
N3: (-12.535,109.483,123.450)
N6: (-15.087,112.507,124.869)
N7: (-16.097,109.724,123.760)
N9: (-14.558,108.264,123.051)
O5': (-17.206,105.722,123.519)
O3': (-13.765,104.136,124.695)
OP2: (-19.334,106.891,124.214)
C3': (-14.290,105.307,124.086)
C1': (-13.893,107.061,122.546)
C5': (-16.482,104.670,122.888)
O4': (-14.862,106.215,121.981)
C8: (-15.890,108.534,123.254)
O2': (-12.082,105.653,123.141)
C6: (-14.321,111.495,124.399)
C5: (-14.808,110.262,123.911)
C4: (-13.862,109.355,123.477)
P: (-18.734,106.014,123.171)
C4': (-15.013,105.009,122.773)
C2': (-13.215,106.305,123.671)
C2: (-12.215,110.661,123.945)
N1: (-12.988,111.642,124.400)
N3: (-12.535,109.483,123.450)
N6: (-15.087,112.507,124.869)
N7: (-16.097,109.724,123.760)
N9: (-14.558,108.264,123.051)
O5': (-17.206,105.722,123.519)
O3': (-13.765,104.136,124.695)
C4: (-21.746,112.780,123.387)
N3: (-20.571,113.094,122.747)
OP1: (-24.026,105.665,121.571)
OP2: (-24.601,107.902,122.651)
C2: (-19.891,112.287,121.870)
C1': (-19.755,110.158,120.725)
C3': (-19.486,108.006,121.651)
O5': (-22.391,107.561,121.508)
O4': (-20.685,109.294,120.131)
C5': (-21.550,107.090,120.477)
P: (-23.918,107.141,121.578)
C4': (-20.313,107.924,120.387)
C2': (-18.730,109.303,121.466)
O2': (-17.612,109.112,120.622)
N1: (-20.460,111.059,121.630)
O4: (-22.283,113.566,124.155)
O2: (-18.857,112.617,121.320)
C6: (-21.612,110.690,122.237)
C5: (-22.262,111.493,123.086)
O3': (-18.643,106.887,121.826)
N3: (-20.571,113.094,122.747)
OP1: (-24.026,105.665,121.571)
OP2: (-24.601,107.902,122.651)
C2: (-19.891,112.287,121.870)
C1': (-19.755,110.158,120.725)
C3': (-19.486,108.006,121.651)
O5': (-22.391,107.561,121.508)
O4': (-20.685,109.294,120.131)
C5': (-21.550,107.090,120.477)
P: (-23.918,107.141,121.578)
C4': (-20.313,107.924,120.387)
C2': (-18.730,109.303,121.466)
O2': (-17.612,109.112,120.622)
N1: (-20.460,111.059,121.630)
O4: (-22.283,113.566,124.155)
O2: (-18.857,112.617,121.320)
C6: (-21.612,110.690,122.237)
C5: (-22.262,111.493,123.086)
O3': (-18.643,106.887,121.826)
Image (generated by PyMOL):