Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12263:12262
Extra
PDB:
ATOM 1 O3' U A2262 -5.280 -37.966 135.359 1.00143.11 O
ATOM 2 P A A2263 -5.002 -36.450 135.810 1.00101.38 P
ATOM 3 OP1 A A2263 -6.339 -35.806 136.036 1.00101.60 O
ATOM 4 OP2 A A2263 -4.069 -35.850 134.796 1.00100.76 O
ATOM 5 O5' A A2263 -4.247 -36.647 137.200 1.00101.86 O
ATOM 6 C5' A A2263 -3.022 -37.334 137.245 1.00101.79 C
ATOM 7 C4' A A2263 -2.741 -37.909 138.595 1.00102.39 C
ATOM 8 O4' A A2263 -2.320 -39.282 138.425 1.00102.46 O
ATOM 9 C3' A A2263 -1.595 -37.243 139.332 1.00102.45 C
ATOM 10 O3' A A2263 -2.010 -36.192 140.171 1.00102.72 O
ATOM 11 C2' A A2263 -0.905 -38.384 140.057 1.00102.82 C
ATOM 12 O2' A A2263 -1.605 -38.719 141.248 1.00103.48 O
ATOM 13 C1' A A2263 -1.089 -39.499 139.053 1.00102.59 C
ATOM 14 N9 A A2263 -0.061 -39.476 138.001 1.00102.01 N
ATOM 15 C8 A A2263 -0.287 -39.056 136.717 1.00101.44 C
ATOM 16 N7 A A2263 0.746 -39.141 135.931 1.00101.00 N
ATOM 17 C5 A A2263 1.718 -39.676 136.754 1.00101.30 C
ATOM 18 C6 A A2263 3.046 -40.011 136.499 1.00101.09 C
ATOM 19 N6 A A2263 3.623 -39.846 135.306 1.00100.51 N
ATOM 20 N1 A A2263 3.762 -40.516 137.520 1.00101.51 N
ATOM 21 C2 A A2263 3.165 -40.663 138.704 1.00102.09 C
ATOM 22 N3 A A2263 1.915 -40.386 139.068 1.00102.35 N
ATOM 23 C4 A A2263 1.238 -39.890 138.030 1.00101.92 C
ATOM 24 P C A2264 -1.089 -34.893 140.283 1.00 79.63 P
ATOM 25 OP1 C A2264 -1.734 -33.983 141.259 1.00 80.03 O
ATOM 26 OP2 C A2264 -0.852 -34.406 138.890 1.00 78.94 O
ATOM 27 O5' C A2264 0.264 -35.489 140.898 1.00 79.79 O
TER
ATOM 1 O3' U B2261 -5.691 -40.330 129.164 1.00185.19 O
ATOM 2 P U B2262 -5.468 -38.973 129.996 1.00141.25 P
ATOM 3 OP1 U B2262 -6.779 -38.270 130.050 1.00141.39 O
ATOM 4 OP2 U B2262 -4.303 -38.272 129.390 1.00140.75 O
ATOM 5 O5' U B2262 -5.076 -39.515 131.438 1.00141.80 O
ATOM 6 C5' U B2262 -6.064 -39.982 132.357 1.00142.38 C
ATOM 7 C4' U B2262 -5.633 -39.738 133.780 1.00142.81 C
ATOM 8 O4' U B2262 -4.580 -40.687 134.134 1.00142.94 O
ATOM 9 C3' U B2262 -5.041 -38.358 134.019 1.00142.61 C
ATOM 10 O3' U B2262 -5.280 -37.966 135.359 1.00143.11 O
ATOM 11 C2' U B2262 -3.560 -38.613 133.826 1.00142.34 C
ATOM 12 O2' U B2262 -2.703 -37.644 134.389 1.00142.29 O
ATOM 13 C1' U B2262 -3.408 -39.975 134.484 1.00142.78 C
ATOM 14 N1 U B2262 -2.236 -40.712 133.994 1.00142.54 N
ATOM 15 C2 U B2262 -1.625 -41.657 134.774 1.00142.91 C
ATOM 16 O2 U B2262 -2.042 -41.997 135.863 1.00143.46 O
ATOM 17 N3 U B2262 -0.520 -42.212 134.186 1.00142.63 N
ATOM 18 C4 U B2262 0.036 -41.901 132.959 1.00142.02 C
ATOM 19 O4 U B2262 1.049 -42.483 132.576 1.00141.84 O
ATOM 20 C5 U B2262 -0.644 -40.888 132.230 1.00141.67 C
ATOM 21 C6 U B2262 -1.721 -40.340 132.775 1.00141.94 C
ATOM 22 P A B2263 -5.002 -36.450 135.810 1.00101.38 P
ATOM 23 OP1 A B2263 -6.339 -35.806 136.036 1.00101.60 O
ATOM 24 OP2 A B2263 -4.069 -35.850 134.796 1.00100.76 O
ATOM 25 O5' A B2263 -4.247 -36.647 137.200 1.00101.86 O
TER
ATOM 2 P A A2263 -5.002 -36.450 135.810 1.00101.38 P
ATOM 3 OP1 A A2263 -6.339 -35.806 136.036 1.00101.60 O
ATOM 4 OP2 A A2263 -4.069 -35.850 134.796 1.00100.76 O
ATOM 5 O5' A A2263 -4.247 -36.647 137.200 1.00101.86 O
ATOM 6 C5' A A2263 -3.022 -37.334 137.245 1.00101.79 C
ATOM 7 C4' A A2263 -2.741 -37.909 138.595 1.00102.39 C
ATOM 8 O4' A A2263 -2.320 -39.282 138.425 1.00102.46 O
ATOM 9 C3' A A2263 -1.595 -37.243 139.332 1.00102.45 C
ATOM 10 O3' A A2263 -2.010 -36.192 140.171 1.00102.72 O
ATOM 11 C2' A A2263 -0.905 -38.384 140.057 1.00102.82 C
ATOM 12 O2' A A2263 -1.605 -38.719 141.248 1.00103.48 O
ATOM 13 C1' A A2263 -1.089 -39.499 139.053 1.00102.59 C
ATOM 14 N9 A A2263 -0.061 -39.476 138.001 1.00102.01 N
ATOM 15 C8 A A2263 -0.287 -39.056 136.717 1.00101.44 C
ATOM 16 N7 A A2263 0.746 -39.141 135.931 1.00101.00 N
ATOM 17 C5 A A2263 1.718 -39.676 136.754 1.00101.30 C
ATOM 18 C6 A A2263 3.046 -40.011 136.499 1.00101.09 C
ATOM 19 N6 A A2263 3.623 -39.846 135.306 1.00100.51 N
ATOM 20 N1 A A2263 3.762 -40.516 137.520 1.00101.51 N
ATOM 21 C2 A A2263 3.165 -40.663 138.704 1.00102.09 C
ATOM 22 N3 A A2263 1.915 -40.386 139.068 1.00102.35 N
ATOM 23 C4 A A2263 1.238 -39.890 138.030 1.00101.92 C
ATOM 24 P C A2264 -1.089 -34.893 140.283 1.00 79.63 P
ATOM 25 OP1 C A2264 -1.734 -33.983 141.259 1.00 80.03 O
ATOM 26 OP2 C A2264 -0.852 -34.406 138.890 1.00 78.94 O
ATOM 27 O5' C A2264 0.264 -35.489 140.898 1.00 79.79 O
TER
ATOM 1 O3' U B2261 -5.691 -40.330 129.164 1.00185.19 O
ATOM 2 P U B2262 -5.468 -38.973 129.996 1.00141.25 P
ATOM 3 OP1 U B2262 -6.779 -38.270 130.050 1.00141.39 O
ATOM 4 OP2 U B2262 -4.303 -38.272 129.390 1.00140.75 O
ATOM 5 O5' U B2262 -5.076 -39.515 131.438 1.00141.80 O
ATOM 6 C5' U B2262 -6.064 -39.982 132.357 1.00142.38 C
ATOM 7 C4' U B2262 -5.633 -39.738 133.780 1.00142.81 C
ATOM 8 O4' U B2262 -4.580 -40.687 134.134 1.00142.94 O
ATOM 9 C3' U B2262 -5.041 -38.358 134.019 1.00142.61 C
ATOM 10 O3' U B2262 -5.280 -37.966 135.359 1.00143.11 O
ATOM 11 C2' U B2262 -3.560 -38.613 133.826 1.00142.34 C
ATOM 12 O2' U B2262 -2.703 -37.644 134.389 1.00142.29 O
ATOM 13 C1' U B2262 -3.408 -39.975 134.484 1.00142.78 C
ATOM 14 N1 U B2262 -2.236 -40.712 133.994 1.00142.54 N
ATOM 15 C2 U B2262 -1.625 -41.657 134.774 1.00142.91 C
ATOM 16 O2 U B2262 -2.042 -41.997 135.863 1.00143.46 O
ATOM 17 N3 U B2262 -0.520 -42.212 134.186 1.00142.63 N
ATOM 18 C4 U B2262 0.036 -41.901 132.959 1.00142.02 C
ATOM 19 O4 U B2262 1.049 -42.483 132.576 1.00141.84 O
ATOM 20 C5 U B2262 -0.644 -40.888 132.230 1.00141.67 C
ATOM 21 C6 U B2262 -1.721 -40.340 132.775 1.00141.94 C
ATOM 22 P A B2263 -5.002 -36.450 135.810 1.00101.38 P
ATOM 23 OP1 A B2263 -6.339 -35.806 136.036 1.00101.60 O
ATOM 24 OP2 A B2263 -4.069 -35.850 134.796 1.00100.76 O
ATOM 25 O5' A B2263 -4.247 -36.647 137.200 1.00101.86 O
TER
Atoms:
OP1: (-6.339,-35.806,136.036)
OP2: (-4.069,-35.850,134.796)
C3': (-1.595,-37.243,139.332)
C1': (-1.089,-39.499,139.053)
C5': (-3.022,-37.334,137.245)
O4': (-2.320,-39.282,138.425)
C8: (-0.287,-39.056,136.717)
O2': (-1.605,-38.719,141.248)
C6: (3.046,-40.011,136.499)
C5: (1.718,-39.676,136.754)
C4: (1.238,-39.890,138.030)
P: (-5.002,-36.450,135.810)
C4': (-2.741,-37.909,138.595)
C2': (-0.905,-38.384,140.057)
C2: (3.165,-40.663,138.704)
N1: (3.762,-40.516,137.520)
N3: (1.915,-40.386,139.068)
N6: (3.623,-39.846,135.306)
N7: (0.746,-39.141,135.931)
N9: (-0.061,-39.476,138.001)
O5': (-4.247,-36.647,137.200)
O3': (-2.010,-36.192,140.171)
OP2: (-4.069,-35.850,134.796)
C3': (-1.595,-37.243,139.332)
C1': (-1.089,-39.499,139.053)
C5': (-3.022,-37.334,137.245)
O4': (-2.320,-39.282,138.425)
C8: (-0.287,-39.056,136.717)
O2': (-1.605,-38.719,141.248)
C6: (3.046,-40.011,136.499)
C5: (1.718,-39.676,136.754)
C4: (1.238,-39.890,138.030)
P: (-5.002,-36.450,135.810)
C4': (-2.741,-37.909,138.595)
C2': (-0.905,-38.384,140.057)
C2: (3.165,-40.663,138.704)
N1: (3.762,-40.516,137.520)
N3: (1.915,-40.386,139.068)
N6: (3.623,-39.846,135.306)
N7: (0.746,-39.141,135.931)
N9: (-0.061,-39.476,138.001)
O5': (-4.247,-36.647,137.200)
O3': (-2.010,-36.192,140.171)
C4: (0.036,-41.901,132.959)
N3: (-0.520,-42.212,134.186)
OP1: (-6.779,-38.270,130.050)
OP2: (-4.303,-38.272,129.390)
C2: (-1.625,-41.657,134.774)
C1': (-3.408,-39.975,134.484)
C3': (-5.041,-38.358,134.019)
O5': (-5.076,-39.515,131.438)
O4': (-4.580,-40.687,134.134)
C5': (-6.064,-39.982,132.357)
P: (-5.468,-38.973,129.996)
C4': (-5.633,-39.738,133.780)
C2': (-3.560,-38.613,133.826)
O2': (-2.703,-37.644,134.389)
N1: (-2.236,-40.712,133.994)
O4: (1.049,-42.483,132.576)
O2: (-2.042,-41.997,135.863)
C6: (-1.721,-40.340,132.775)
C5: (-0.644,-40.888,132.230)
O3': (-5.280,-37.966,135.359)
N3: (-0.520,-42.212,134.186)
OP1: (-6.779,-38.270,130.050)
OP2: (-4.303,-38.272,129.390)
C2: (-1.625,-41.657,134.774)
C1': (-3.408,-39.975,134.484)
C3': (-5.041,-38.358,134.019)
O5': (-5.076,-39.515,131.438)
O4': (-4.580,-40.687,134.134)
C5': (-6.064,-39.982,132.357)
P: (-5.468,-38.973,129.996)
C4': (-5.633,-39.738,133.780)
C2': (-3.560,-38.613,133.826)
O2': (-2.703,-37.644,134.389)
N1: (-2.236,-40.712,133.994)
O4: (1.049,-42.483,132.576)
O2: (-2.042,-41.997,135.863)
C6: (-1.721,-40.340,132.775)
C5: (-0.644,-40.888,132.230)
O3': (-5.280,-37.966,135.359)
Image (generated by PyMOL):