Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1I9X:B4:B3
Extra
PDB:
ATOM 1 O3' U A 3 -3.960 8.939 17.780 1.00 52.62 O
ATOM 2 P A A 4 -4.177 8.270 16.353 1.00 51.49 P
ATOM 3 OP1 A A 4 -5.649 8.153 16.245 1.00 56.04 O
ATOM 4 OP2 A A 4 -3.338 7.056 16.191 1.00 52.03 O
ATOM 5 O5' A A 4 -3.727 9.430 15.372 1.00 54.44 O
ATOM 6 C5' A A 4 -2.680 9.274 14.434 1.00 51.70 C
ATOM 7 C4' A A 4 -2.004 10.605 14.233 1.00 50.14 C
ATOM 8 O4' A A 4 -3.038 11.612 14.161 1.00 48.69 O
ATOM 9 C3' A A 4 -1.153 11.073 15.409 1.00 50.28 C
ATOM 10 O3' A A 4 0.179 10.625 15.219 1.00 50.00 O
ATOM 11 C2' A A 4 -1.148 12.578 15.244 1.00 47.77 C
ATOM 12 O2' A A 4 -0.139 12.911 14.316 1.00 47.82 O
ATOM 13 C1' A A 4 -2.553 12.835 14.677 1.00 47.45 C
ATOM 14 N9 A A 4 -3.511 13.335 15.663 1.00 46.86 N
ATOM 15 C8 A A 4 -4.272 12.631 16.568 1.00 44.14 C
ATOM 16 N7 A A 4 -5.019 13.391 17.330 1.00 43.60 N
ATOM 17 C5 A A 4 -4.749 14.679 16.884 1.00 44.88 C
ATOM 18 C6 A A 4 -5.233 15.936 17.271 1.00 44.54 C
ATOM 19 N6 A A 4 -6.127 16.121 18.232 1.00 46.64 N
ATOM 20 N1 A A 4 -4.755 17.023 16.626 1.00 45.42 N
ATOM 21 C2 A A 4 -3.846 16.842 15.660 1.00 44.50 C
ATOM 22 N3 A A 4 -3.313 15.712 15.210 1.00 45.01 N
ATOM 23 C4 A A 4 -3.816 14.657 15.867 1.00 44.69 C
ATOM 24 P A A 5 0.824 9.603 16.266 1.00 50.68 P
ATOM 25 OP1 A A 5 0.661 10.178 17.620 1.00 47.93 O
ATOM 26 OP2 A A 5 2.191 9.304 15.733 1.00 52.88 O
ATOM 27 O5' A A 5 -0.009 8.260 16.081 1.00 53.47 O
TER
ATOM 1 O3' C B 2 -8.916 9.016 21.303 1.00 55.41 O
ATOM 2 P U B 3 -8.641 8.529 19.802 1.00 56.58 P
ATOM 3 OP1 U B 3 -9.085 9.619 18.901 1.00 58.49 O
ATOM 4 OP2 U B 3 -9.171 7.153 19.620 1.00 55.95 O
ATOM 5 O5' U B 3 -7.054 8.453 19.698 1.00 55.51 O
ATOM 6 C5' U B 3 -6.250 9.620 19.881 1.00 51.90 C
ATOM 7 C4' U B 3 -4.805 9.220 20.001 1.00 51.58 C
ATOM 8 O4' U B 3 -4.611 8.476 21.232 1.00 52.07 O
ATOM 9 C3' U B 3 -4.346 8.241 18.939 1.00 51.71 C
ATOM 10 O3' U B 3 -3.960 8.939 17.780 1.00 52.62 O
ATOM 11 C2' U B 3 -3.124 7.620 19.587 1.00 51.97 C
ATOM 12 O2' U B 3 -2.003 8.485 19.461 1.00 55.10 O
ATOM 13 C1' U B 3 -3.577 7.527 21.044 1.00 50.41 C
ATOM 14 N1 U B 3 -4.098 6.201 21.390 1.00 48.96 N
ATOM 15 C2 U B 3 -3.174 5.211 21.668 1.00 46.70 C
ATOM 16 O2 U B 3 -1.976 5.398 21.627 1.00 45.51 O
ATOM 17 N3 U B 3 -3.708 3.993 21.985 1.00 45.64 N
ATOM 18 C4 U B 3 -5.048 3.664 22.051 1.00 45.06 C
ATOM 19 O4 U B 3 -5.372 2.518 22.368 1.00 43.91 O
ATOM 20 C5 U B 3 -5.941 4.735 21.748 1.00 44.85 C
ATOM 21 C6 U B 3 -5.451 5.939 21.435 1.00 48.17 C
ATOM 22 P A B 4 -4.177 8.270 16.353 1.00 51.49 P
ATOM 23 OP1 A B 4 -5.649 8.153 16.245 1.00 56.04 O
ATOM 24 OP2 A B 4 -3.338 7.056 16.191 1.00 52.03 O
ATOM 25 O5' A B 4 -3.727 9.430 15.372 1.00 54.44 O
TER
ATOM 2 P A A 4 -4.177 8.270 16.353 1.00 51.49 P
ATOM 3 OP1 A A 4 -5.649 8.153 16.245 1.00 56.04 O
ATOM 4 OP2 A A 4 -3.338 7.056 16.191 1.00 52.03 O
ATOM 5 O5' A A 4 -3.727 9.430 15.372 1.00 54.44 O
ATOM 6 C5' A A 4 -2.680 9.274 14.434 1.00 51.70 C
ATOM 7 C4' A A 4 -2.004 10.605 14.233 1.00 50.14 C
ATOM 8 O4' A A 4 -3.038 11.612 14.161 1.00 48.69 O
ATOM 9 C3' A A 4 -1.153 11.073 15.409 1.00 50.28 C
ATOM 10 O3' A A 4 0.179 10.625 15.219 1.00 50.00 O
ATOM 11 C2' A A 4 -1.148 12.578 15.244 1.00 47.77 C
ATOM 12 O2' A A 4 -0.139 12.911 14.316 1.00 47.82 O
ATOM 13 C1' A A 4 -2.553 12.835 14.677 1.00 47.45 C
ATOM 14 N9 A A 4 -3.511 13.335 15.663 1.00 46.86 N
ATOM 15 C8 A A 4 -4.272 12.631 16.568 1.00 44.14 C
ATOM 16 N7 A A 4 -5.019 13.391 17.330 1.00 43.60 N
ATOM 17 C5 A A 4 -4.749 14.679 16.884 1.00 44.88 C
ATOM 18 C6 A A 4 -5.233 15.936 17.271 1.00 44.54 C
ATOM 19 N6 A A 4 -6.127 16.121 18.232 1.00 46.64 N
ATOM 20 N1 A A 4 -4.755 17.023 16.626 1.00 45.42 N
ATOM 21 C2 A A 4 -3.846 16.842 15.660 1.00 44.50 C
ATOM 22 N3 A A 4 -3.313 15.712 15.210 1.00 45.01 N
ATOM 23 C4 A A 4 -3.816 14.657 15.867 1.00 44.69 C
ATOM 24 P A A 5 0.824 9.603 16.266 1.00 50.68 P
ATOM 25 OP1 A A 5 0.661 10.178 17.620 1.00 47.93 O
ATOM 26 OP2 A A 5 2.191 9.304 15.733 1.00 52.88 O
ATOM 27 O5' A A 5 -0.009 8.260 16.081 1.00 53.47 O
TER
ATOM 1 O3' C B 2 -8.916 9.016 21.303 1.00 55.41 O
ATOM 2 P U B 3 -8.641 8.529 19.802 1.00 56.58 P
ATOM 3 OP1 U B 3 -9.085 9.619 18.901 1.00 58.49 O
ATOM 4 OP2 U B 3 -9.171 7.153 19.620 1.00 55.95 O
ATOM 5 O5' U B 3 -7.054 8.453 19.698 1.00 55.51 O
ATOM 6 C5' U B 3 -6.250 9.620 19.881 1.00 51.90 C
ATOM 7 C4' U B 3 -4.805 9.220 20.001 1.00 51.58 C
ATOM 8 O4' U B 3 -4.611 8.476 21.232 1.00 52.07 O
ATOM 9 C3' U B 3 -4.346 8.241 18.939 1.00 51.71 C
ATOM 10 O3' U B 3 -3.960 8.939 17.780 1.00 52.62 O
ATOM 11 C2' U B 3 -3.124 7.620 19.587 1.00 51.97 C
ATOM 12 O2' U B 3 -2.003 8.485 19.461 1.00 55.10 O
ATOM 13 C1' U B 3 -3.577 7.527 21.044 1.00 50.41 C
ATOM 14 N1 U B 3 -4.098 6.201 21.390 1.00 48.96 N
ATOM 15 C2 U B 3 -3.174 5.211 21.668 1.00 46.70 C
ATOM 16 O2 U B 3 -1.976 5.398 21.627 1.00 45.51 O
ATOM 17 N3 U B 3 -3.708 3.993 21.985 1.00 45.64 N
ATOM 18 C4 U B 3 -5.048 3.664 22.051 1.00 45.06 C
ATOM 19 O4 U B 3 -5.372 2.518 22.368 1.00 43.91 O
ATOM 20 C5 U B 3 -5.941 4.735 21.748 1.00 44.85 C
ATOM 21 C6 U B 3 -5.451 5.939 21.435 1.00 48.17 C
ATOM 22 P A B 4 -4.177 8.270 16.353 1.00 51.49 P
ATOM 23 OP1 A B 4 -5.649 8.153 16.245 1.00 56.04 O
ATOM 24 OP2 A B 4 -3.338 7.056 16.191 1.00 52.03 O
ATOM 25 O5' A B 4 -3.727 9.430 15.372 1.00 54.44 O
TER
Atoms:
OP1: (-5.649,8.153,16.245)
OP2: (-3.338,7.056,16.191)
C3': (-1.153,11.073,15.409)
C1': (-2.553,12.835,14.677)
C5': (-2.680,9.274,14.434)
O4': (-3.038,11.612,14.161)
C8: (-4.272,12.631,16.568)
O2': (-0.139,12.911,14.316)
C6: (-5.233,15.936,17.271)
C5: (-4.749,14.679,16.884)
C4: (-3.816,14.657,15.867)
P: (-4.177,8.270,16.353)
C4': (-2.004,10.605,14.233)
C2': (-1.148,12.578,15.244)
C2: (-3.846,16.842,15.660)
N1: (-4.755,17.023,16.626)
N3: (-3.313,15.712,15.210)
N6: (-6.127,16.121,18.232)
N7: (-5.019,13.391,17.330)
N9: (-3.511,13.335,15.663)
O5': (-3.727,9.430,15.372)
O3': (0.179,10.625,15.219)
OP2: (-3.338,7.056,16.191)
C3': (-1.153,11.073,15.409)
C1': (-2.553,12.835,14.677)
C5': (-2.680,9.274,14.434)
O4': (-3.038,11.612,14.161)
C8: (-4.272,12.631,16.568)
O2': (-0.139,12.911,14.316)
C6: (-5.233,15.936,17.271)
C5: (-4.749,14.679,16.884)
C4: (-3.816,14.657,15.867)
P: (-4.177,8.270,16.353)
C4': (-2.004,10.605,14.233)
C2': (-1.148,12.578,15.244)
C2: (-3.846,16.842,15.660)
N1: (-4.755,17.023,16.626)
N3: (-3.313,15.712,15.210)
N6: (-6.127,16.121,18.232)
N7: (-5.019,13.391,17.330)
N9: (-3.511,13.335,15.663)
O5': (-3.727,9.430,15.372)
O3': (0.179,10.625,15.219)
C4: (-5.048,3.664,22.051)
N3: (-3.708,3.993,21.985)
OP1: (-9.085,9.619,18.901)
OP2: (-9.171,7.153,19.620)
C2: (-3.174,5.211,21.668)
C1': (-3.577,7.527,21.044)
C3': (-4.346,8.241,18.939)
O5': (-7.054,8.453,19.698)
O4': (-4.611,8.476,21.232)
C5': (-6.250,9.620,19.881)
P: (-8.641,8.529,19.802)
C4': (-4.805,9.220,20.001)
C2': (-3.124,7.620,19.587)
O2': (-2.003,8.485,19.461)
N1: (-4.098,6.201,21.390)
O4: (-5.372,2.518,22.368)
O2: (-1.976,5.398,21.627)
C6: (-5.451,5.939,21.435)
C5: (-5.941,4.735,21.748)
O3': (-3.960,8.939,17.780)
N3: (-3.708,3.993,21.985)
OP1: (-9.085,9.619,18.901)
OP2: (-9.171,7.153,19.620)
C2: (-3.174,5.211,21.668)
C1': (-3.577,7.527,21.044)
C3': (-4.346,8.241,18.939)
O5': (-7.054,8.453,19.698)
O4': (-4.611,8.476,21.232)
C5': (-6.250,9.620,19.881)
P: (-8.641,8.529,19.802)
C4': (-4.805,9.220,20.001)
C2': (-3.124,7.620,19.587)
O2': (-2.003,8.485,19.461)
N1: (-4.098,6.201,21.390)
O4: (-5.372,2.518,22.368)
O2: (-1.976,5.398,21.627)
C6: (-5.451,5.939,21.435)
C5: (-5.941,4.735,21.748)
O3': (-3.960,8.939,17.780)
Image (generated by PyMOL):