Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YJY:C7:C6
Extra
PDB:
ATOM 1 O3' U A 6 9.929 -1.945 56.952 1.00 82.20 O
ATOM 2 P A A 7 11.275 -1.539 56.187 1.00 98.83 P
ATOM 3 OP1 A A 7 12.227 -2.674 56.251 1.00 86.59 O
ATOM 4 OP2 A A 7 11.694 -0.179 56.608 1.00 70.50 O
ATOM 5 O5' A A 7 10.722 -1.351 54.691 1.00 77.23 O
ATOM 6 C5' A A 7 11.007 -0.166 53.961 1.00 63.84 C
ATOM 7 C4' A A 7 9.830 0.339 53.151 1.00 61.96 C
ATOM 8 O4' A A 7 8.614 0.303 53.943 1.00 37.60 O
ATOM 9 C3' A A 7 9.959 1.785 52.684 1.00 54.41 C
ATOM 10 O3' A A 7 10.661 1.903 51.463 1.00 51.56 O
ATOM 11 C2' A A 7 8.536 2.324 52.662 1.00 49.63 C
ATOM 12 O2' A A 7 7.859 2.010 51.454 1.00 49.94 O
ATOM 13 C1' A A 7 7.939 1.539 53.831 1.00 48.28 C
ATOM 14 N9 A A 7 8.201 2.259 55.088 1.00 47.34 N
ATOM 15 C8 A A 7 8.969 1.841 56.143 1.00 44.42 C
ATOM 16 N7 A A 7 9.024 2.704 57.129 1.00 37.14 N
ATOM 17 C5 A A 7 8.254 3.760 56.674 1.00 33.32 C
ATOM 18 C6 A A 7 7.902 4.991 57.248 1.00 31.11 C
ATOM 19 N6 A A 7 8.300 5.389 58.459 1.00 24.02 N
ATOM 20 N1 A A 7 7.115 5.801 56.515 1.00 36.47 N
ATOM 21 C2 A A 7 6.700 5.415 55.307 1.00 29.76 C
ATOM 22 N3 A A 7 6.964 4.285 54.671 1.00 34.00 N
ATOM 23 C4 A A 7 7.749 3.505 55.419 1.00 33.79 C
ATOM 24 P U A 8 12.231 1.708 51.634 1.00 72.87 P
ATOM 25 OP1 U A 8 12.640 0.448 50.969 1.00 69.80 O
ATOM 26 OP2 U A 8 12.584 1.948 53.055 1.00 61.35 O
ATOM 27 O5' U A 8 12.819 2.988 50.880 1.00 65.98 O
TER
ATOM 1 O3' A B 5 9.730 -8.840 57.701 1.00 57.53 O
ATOM 2 P U B 6 10.622 -7.667 57.090 1.00 86.31 P
ATOM 3 OP1 U B 6 11.787 -7.403 57.972 1.00 69.50 O
ATOM 4 OP2 U B 6 10.805 -7.986 55.655 1.00 80.50 O
ATOM 5 O5' U B 6 9.671 -6.379 57.088 1.00 67.72 O
ATOM 6 C5' U B 6 10.285 -5.119 57.313 1.00 72.14 C
ATOM 7 C4' U B 6 9.324 -4.104 57.880 1.00 75.37 C
ATOM 8 O4' U B 6 8.818 -4.525 59.175 1.00 65.17 O
ATOM 9 C3' U B 6 9.914 -2.726 58.134 1.00 77.36 C
ATOM 10 O3' U B 6 9.929 -1.945 56.952 1.00 82.20 O
ATOM 11 C2' U B 6 8.991 -2.142 59.197 1.00 67.95 C
ATOM 12 O2' U B 6 7.876 -1.517 58.578 1.00 65.65 O
ATOM 13 C1' U B 6 8.503 -3.385 59.951 1.00 62.46 C
ATOM 14 N1 U B 6 8.989 -3.523 61.364 1.00 63.15 N
ATOM 15 C2 U B 6 8.090 -3.937 62.328 1.00 52.09 C
ATOM 16 O2 U B 6 6.930 -4.208 62.083 1.00 57.45 O
ATOM 17 N3 U B 6 8.587 -4.038 63.600 1.00 45.18 N
ATOM 18 C4 U B 6 9.883 -3.765 63.996 1.00 60.41 C
ATOM 19 O4 U B 6 10.188 -3.900 65.178 1.00 61.77 O
ATOM 20 C5 U B 6 10.771 -3.328 62.939 1.00 72.13 C
ATOM 21 C6 U B 6 10.301 -3.223 61.686 1.00 73.98 C
ATOM 22 P A B 7 11.275 -1.539 56.187 1.00 98.83 P
ATOM 23 OP1 A B 7 12.227 -2.674 56.251 1.00 86.59 O
ATOM 24 OP2 A B 7 11.694 -0.179 56.608 1.00 70.50 O
ATOM 25 O5' A B 7 10.722 -1.351 54.691 1.00 77.23 O
TER
ATOM 2 P A A 7 11.275 -1.539 56.187 1.00 98.83 P
ATOM 3 OP1 A A 7 12.227 -2.674 56.251 1.00 86.59 O
ATOM 4 OP2 A A 7 11.694 -0.179 56.608 1.00 70.50 O
ATOM 5 O5' A A 7 10.722 -1.351 54.691 1.00 77.23 O
ATOM 6 C5' A A 7 11.007 -0.166 53.961 1.00 63.84 C
ATOM 7 C4' A A 7 9.830 0.339 53.151 1.00 61.96 C
ATOM 8 O4' A A 7 8.614 0.303 53.943 1.00 37.60 O
ATOM 9 C3' A A 7 9.959 1.785 52.684 1.00 54.41 C
ATOM 10 O3' A A 7 10.661 1.903 51.463 1.00 51.56 O
ATOM 11 C2' A A 7 8.536 2.324 52.662 1.00 49.63 C
ATOM 12 O2' A A 7 7.859 2.010 51.454 1.00 49.94 O
ATOM 13 C1' A A 7 7.939 1.539 53.831 1.00 48.28 C
ATOM 14 N9 A A 7 8.201 2.259 55.088 1.00 47.34 N
ATOM 15 C8 A A 7 8.969 1.841 56.143 1.00 44.42 C
ATOM 16 N7 A A 7 9.024 2.704 57.129 1.00 37.14 N
ATOM 17 C5 A A 7 8.254 3.760 56.674 1.00 33.32 C
ATOM 18 C6 A A 7 7.902 4.991 57.248 1.00 31.11 C
ATOM 19 N6 A A 7 8.300 5.389 58.459 1.00 24.02 N
ATOM 20 N1 A A 7 7.115 5.801 56.515 1.00 36.47 N
ATOM 21 C2 A A 7 6.700 5.415 55.307 1.00 29.76 C
ATOM 22 N3 A A 7 6.964 4.285 54.671 1.00 34.00 N
ATOM 23 C4 A A 7 7.749 3.505 55.419 1.00 33.79 C
ATOM 24 P U A 8 12.231 1.708 51.634 1.00 72.87 P
ATOM 25 OP1 U A 8 12.640 0.448 50.969 1.00 69.80 O
ATOM 26 OP2 U A 8 12.584 1.948 53.055 1.00 61.35 O
ATOM 27 O5' U A 8 12.819 2.988 50.880 1.00 65.98 O
TER
ATOM 1 O3' A B 5 9.730 -8.840 57.701 1.00 57.53 O
ATOM 2 P U B 6 10.622 -7.667 57.090 1.00 86.31 P
ATOM 3 OP1 U B 6 11.787 -7.403 57.972 1.00 69.50 O
ATOM 4 OP2 U B 6 10.805 -7.986 55.655 1.00 80.50 O
ATOM 5 O5' U B 6 9.671 -6.379 57.088 1.00 67.72 O
ATOM 6 C5' U B 6 10.285 -5.119 57.313 1.00 72.14 C
ATOM 7 C4' U B 6 9.324 -4.104 57.880 1.00 75.37 C
ATOM 8 O4' U B 6 8.818 -4.525 59.175 1.00 65.17 O
ATOM 9 C3' U B 6 9.914 -2.726 58.134 1.00 77.36 C
ATOM 10 O3' U B 6 9.929 -1.945 56.952 1.00 82.20 O
ATOM 11 C2' U B 6 8.991 -2.142 59.197 1.00 67.95 C
ATOM 12 O2' U B 6 7.876 -1.517 58.578 1.00 65.65 O
ATOM 13 C1' U B 6 8.503 -3.385 59.951 1.00 62.46 C
ATOM 14 N1 U B 6 8.989 -3.523 61.364 1.00 63.15 N
ATOM 15 C2 U B 6 8.090 -3.937 62.328 1.00 52.09 C
ATOM 16 O2 U B 6 6.930 -4.208 62.083 1.00 57.45 O
ATOM 17 N3 U B 6 8.587 -4.038 63.600 1.00 45.18 N
ATOM 18 C4 U B 6 9.883 -3.765 63.996 1.00 60.41 C
ATOM 19 O4 U B 6 10.188 -3.900 65.178 1.00 61.77 O
ATOM 20 C5 U B 6 10.771 -3.328 62.939 1.00 72.13 C
ATOM 21 C6 U B 6 10.301 -3.223 61.686 1.00 73.98 C
ATOM 22 P A B 7 11.275 -1.539 56.187 1.00 98.83 P
ATOM 23 OP1 A B 7 12.227 -2.674 56.251 1.00 86.59 O
ATOM 24 OP2 A B 7 11.694 -0.179 56.608 1.00 70.50 O
ATOM 25 O5' A B 7 10.722 -1.351 54.691 1.00 77.23 O
TER
Atoms:
OP1: (12.227,-2.674,56.251)
OP2: (11.694,-0.179,56.608)
C3': (9.959,1.785,52.684)
C1': (7.939,1.539,53.831)
C5': (11.007,-0.166,53.961)
O4': (8.614,0.303,53.943)
C8: (8.969,1.841,56.143)
O2': (7.859,2.010,51.454)
C6: (7.902,4.991,57.248)
C5: (8.254,3.760,56.674)
C4: (7.749,3.505,55.419)
P: (11.275,-1.539,56.187)
C4': (9.830,0.339,53.151)
C2': (8.536,2.324,52.662)
C2: (6.700,5.415,55.307)
N1: (7.115,5.801,56.515)
N3: (6.964,4.285,54.671)
N6: (8.300,5.389,58.459)
N7: (9.024,2.704,57.129)
N9: (8.201,2.259,55.088)
O5': (10.722,-1.351,54.691)
O3': (10.661,1.903,51.463)
OP2: (11.694,-0.179,56.608)
C3': (9.959,1.785,52.684)
C1': (7.939,1.539,53.831)
C5': (11.007,-0.166,53.961)
O4': (8.614,0.303,53.943)
C8: (8.969,1.841,56.143)
O2': (7.859,2.010,51.454)
C6: (7.902,4.991,57.248)
C5: (8.254,3.760,56.674)
C4: (7.749,3.505,55.419)
P: (11.275,-1.539,56.187)
C4': (9.830,0.339,53.151)
C2': (8.536,2.324,52.662)
C2: (6.700,5.415,55.307)
N1: (7.115,5.801,56.515)
N3: (6.964,4.285,54.671)
N6: (8.300,5.389,58.459)
N7: (9.024,2.704,57.129)
N9: (8.201,2.259,55.088)
O5': (10.722,-1.351,54.691)
O3': (10.661,1.903,51.463)
C4: (9.883,-3.765,63.996)
N3: (8.587,-4.038,63.600)
OP1: (11.787,-7.403,57.972)
OP2: (10.805,-7.986,55.655)
C2: (8.090,-3.937,62.328)
C1': (8.503,-3.385,59.951)
C3': (9.914,-2.726,58.134)
O5': (9.671,-6.379,57.088)
O4': (8.818,-4.525,59.175)
C5': (10.285,-5.119,57.313)
P: (10.622,-7.667,57.090)
C4': (9.324,-4.104,57.880)
C2': (8.991,-2.142,59.197)
O2': (7.876,-1.517,58.578)
N1: (8.989,-3.523,61.364)
O4: (10.188,-3.900,65.178)
O2: (6.930,-4.208,62.083)
C6: (10.301,-3.223,61.686)
C5: (10.771,-3.328,62.939)
O3': (9.929,-1.945,56.952)
N3: (8.587,-4.038,63.600)
OP1: (11.787,-7.403,57.972)
OP2: (10.805,-7.986,55.655)
C2: (8.090,-3.937,62.328)
C1': (8.503,-3.385,59.951)
C3': (9.914,-2.726,58.134)
O5': (9.671,-6.379,57.088)
O4': (8.818,-4.525,59.175)
C5': (10.285,-5.119,57.313)
P: (10.622,-7.667,57.090)
C4': (9.324,-4.104,57.880)
C2': (8.991,-2.142,59.197)
O2': (7.876,-1.517,58.578)
N1: (8.989,-3.523,61.364)
O4: (10.188,-3.900,65.178)
O2: (6.930,-4.208,62.083)
C6: (10.301,-3.223,61.686)
C5: (10.771,-3.328,62.939)
O3': (9.929,-1.945,56.952)
Image (generated by PyMOL):