Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B28:B43
Extra
PDB:
ATOM 1 O3' G A 27 -8.447 45.020 3.464 1.00 38.61 O
ATOM 2 P A A 28 -9.352 45.792 4.538 1.00 40.94 P
ATOM 3 OP1 A A 28 -9.136 47.243 4.352 1.00 40.57 O
ATOM 4 OP2 A A 28 -9.118 45.166 5.859 1.00 38.27 O
ATOM 5 O5' A A 28 -10.846 45.461 4.077 1.00 37.00 O
ATOM 6 C5' A A 28 -11.936 45.813 4.915 1.00 37.96 C
ATOM 7 C4' A A 28 -13.244 45.411 4.265 1.00 40.51 C
ATOM 8 O4' A A 28 -13.426 46.176 3.051 1.00 40.81 O
ATOM 9 C3' A A 28 -13.305 43.958 3.823 1.00 36.89 C
ATOM 10 O3' A A 28 -13.738 43.152 4.912 1.00 34.99 O
ATOM 11 C2' A A 28 -14.341 44.015 2.703 1.00 37.76 C
ATOM 12 O2' A A 28 -15.664 43.965 3.194 1.00 40.66 O
ATOM 13 C1' A A 28 -14.097 45.390 2.085 1.00 39.04 C
ATOM 14 N9 A A 28 -13.303 45.408 0.856 1.00 37.31 N
ATOM 15 C8 A A 28 -12.115 46.058 0.669 1.00 37.32 C
ATOM 16 N7 A A 28 -11.618 45.919 -0.537 1.00 36.35 N
ATOM 17 C5 A A 28 -12.543 45.124 -1.191 1.00 36.67 C
ATOM 18 C6 A A 28 -12.594 44.613 -2.503 1.00 36.67 C
ATOM 19 N6 A A 28 -11.649 44.849 -3.419 1.00 35.22 N
ATOM 20 N1 A A 28 -13.654 43.850 -2.840 1.00 34.07 N
ATOM 21 C2 A A 28 -14.596 43.618 -1.919 1.00 36.93 C
ATOM 22 N3 A A 28 -14.656 44.042 -0.656 1.00 40.07 N
ATOM 23 C4 A A 28 -13.590 44.799 -0.349 1.00 39.15 C
ATOM 24 P G A 29 -13.098 41.703 5.157 1.00 39.97 P
ATOM 25 OP1 G A 29 -13.586 41.204 6.462 1.00 39.94 O
ATOM 26 OP2 G A 29 -11.643 41.779 4.898 1.00 34.14 O
ATOM 27 O5' G A 29 -13.796 40.832 4.015 1.00 36.47 O
TER
ATOM 1 O3' A B 42 -7.986 49.153 -7.925 1.00 27.31 O
ATOM 2 P A B 43 -9.049 49.151 -6.727 1.00 31.35 P
ATOM 3 OP1 A B 43 -9.292 50.557 -6.334 1.00 31.75 O
ATOM 4 OP2 A B 43 -8.586 48.175 -5.717 1.00 28.78 O
ATOM 5 O5' A B 43 -10.384 48.604 -7.414 1.00 32.79 O
ATOM 6 C5' A B 43 -10.500 47.218 -7.701 1.00 28.81 C
ATOM 7 C4' A B 43 -11.932 46.758 -7.507 1.00 30.47 C
ATOM 8 O4' A B 43 -12.798 47.472 -8.420 1.00 30.80 O
ATOM 9 C3' A B 43 -12.176 45.287 -7.804 1.00 26.84 C
ATOM 10 O3' A B 43 -11.910 44.525 -6.640 1.00 26.54 O
ATOM 11 C2' A B 43 -13.664 45.287 -8.127 1.00 29.48 C
ATOM 12 O2' A B 43 -14.458 45.296 -6.956 1.00 29.23 O
ATOM 13 C1' A B 43 -13.835 46.615 -8.859 1.00 31.59 C
ATOM 14 N9 A B 43 -13.774 46.546 -10.317 1.00 31.33 N
ATOM 15 C8 A B 43 -12.804 47.083 -11.117 1.00 33.25 C
ATOM 16 N7 A B 43 -13.000 46.879 -12.398 1.00 30.18 N
ATOM 17 C5 A B 43 -14.185 46.167 -12.442 1.00 27.37 C
ATOM 18 C6 A B 43 -14.932 45.649 -13.516 1.00 29.40 C
ATOM 19 N6 A B 43 -14.563 45.789 -14.792 1.00 27.66 N
ATOM 20 N1 A B 43 -16.068 44.984 -13.224 1.00 29.31 N
ATOM 21 C2 A B 43 -16.425 44.853 -11.941 1.00 29.92 C
ATOM 22 N3 A B 43 -15.803 45.294 -10.847 1.00 31.23 N
ATOM 23 C4 A B 43 -14.678 45.952 -11.170 1.00 31.14 C
ATOM 24 P C B 44 -10.725 43.452 -6.613 1.00 29.20 P
ATOM 25 OP1 C B 44 -10.810 42.686 -5.351 1.00 32.61 O
ATOM 26 OP2 C B 44 -9.469 44.138 -6.994 1.00 30.71 O
ATOM 27 O5' C B 44 -11.145 42.458 -7.778 1.00 32.24 O
TER
ATOM 2 P A A 28 -9.352 45.792 4.538 1.00 40.94 P
ATOM 3 OP1 A A 28 -9.136 47.243 4.352 1.00 40.57 O
ATOM 4 OP2 A A 28 -9.118 45.166 5.859 1.00 38.27 O
ATOM 5 O5' A A 28 -10.846 45.461 4.077 1.00 37.00 O
ATOM 6 C5' A A 28 -11.936 45.813 4.915 1.00 37.96 C
ATOM 7 C4' A A 28 -13.244 45.411 4.265 1.00 40.51 C
ATOM 8 O4' A A 28 -13.426 46.176 3.051 1.00 40.81 O
ATOM 9 C3' A A 28 -13.305 43.958 3.823 1.00 36.89 C
ATOM 10 O3' A A 28 -13.738 43.152 4.912 1.00 34.99 O
ATOM 11 C2' A A 28 -14.341 44.015 2.703 1.00 37.76 C
ATOM 12 O2' A A 28 -15.664 43.965 3.194 1.00 40.66 O
ATOM 13 C1' A A 28 -14.097 45.390 2.085 1.00 39.04 C
ATOM 14 N9 A A 28 -13.303 45.408 0.856 1.00 37.31 N
ATOM 15 C8 A A 28 -12.115 46.058 0.669 1.00 37.32 C
ATOM 16 N7 A A 28 -11.618 45.919 -0.537 1.00 36.35 N
ATOM 17 C5 A A 28 -12.543 45.124 -1.191 1.00 36.67 C
ATOM 18 C6 A A 28 -12.594 44.613 -2.503 1.00 36.67 C
ATOM 19 N6 A A 28 -11.649 44.849 -3.419 1.00 35.22 N
ATOM 20 N1 A A 28 -13.654 43.850 -2.840 1.00 34.07 N
ATOM 21 C2 A A 28 -14.596 43.618 -1.919 1.00 36.93 C
ATOM 22 N3 A A 28 -14.656 44.042 -0.656 1.00 40.07 N
ATOM 23 C4 A A 28 -13.590 44.799 -0.349 1.00 39.15 C
ATOM 24 P G A 29 -13.098 41.703 5.157 1.00 39.97 P
ATOM 25 OP1 G A 29 -13.586 41.204 6.462 1.00 39.94 O
ATOM 26 OP2 G A 29 -11.643 41.779 4.898 1.00 34.14 O
ATOM 27 O5' G A 29 -13.796 40.832 4.015 1.00 36.47 O
TER
ATOM 1 O3' A B 42 -7.986 49.153 -7.925 1.00 27.31 O
ATOM 2 P A B 43 -9.049 49.151 -6.727 1.00 31.35 P
ATOM 3 OP1 A B 43 -9.292 50.557 -6.334 1.00 31.75 O
ATOM 4 OP2 A B 43 -8.586 48.175 -5.717 1.00 28.78 O
ATOM 5 O5' A B 43 -10.384 48.604 -7.414 1.00 32.79 O
ATOM 6 C5' A B 43 -10.500 47.218 -7.701 1.00 28.81 C
ATOM 7 C4' A B 43 -11.932 46.758 -7.507 1.00 30.47 C
ATOM 8 O4' A B 43 -12.798 47.472 -8.420 1.00 30.80 O
ATOM 9 C3' A B 43 -12.176 45.287 -7.804 1.00 26.84 C
ATOM 10 O3' A B 43 -11.910 44.525 -6.640 1.00 26.54 O
ATOM 11 C2' A B 43 -13.664 45.287 -8.127 1.00 29.48 C
ATOM 12 O2' A B 43 -14.458 45.296 -6.956 1.00 29.23 O
ATOM 13 C1' A B 43 -13.835 46.615 -8.859 1.00 31.59 C
ATOM 14 N9 A B 43 -13.774 46.546 -10.317 1.00 31.33 N
ATOM 15 C8 A B 43 -12.804 47.083 -11.117 1.00 33.25 C
ATOM 16 N7 A B 43 -13.000 46.879 -12.398 1.00 30.18 N
ATOM 17 C5 A B 43 -14.185 46.167 -12.442 1.00 27.37 C
ATOM 18 C6 A B 43 -14.932 45.649 -13.516 1.00 29.40 C
ATOM 19 N6 A B 43 -14.563 45.789 -14.792 1.00 27.66 N
ATOM 20 N1 A B 43 -16.068 44.984 -13.224 1.00 29.31 N
ATOM 21 C2 A B 43 -16.425 44.853 -11.941 1.00 29.92 C
ATOM 22 N3 A B 43 -15.803 45.294 -10.847 1.00 31.23 N
ATOM 23 C4 A B 43 -14.678 45.952 -11.170 1.00 31.14 C
ATOM 24 P C B 44 -10.725 43.452 -6.613 1.00 29.20 P
ATOM 25 OP1 C B 44 -10.810 42.686 -5.351 1.00 32.61 O
ATOM 26 OP2 C B 44 -9.469 44.138 -6.994 1.00 30.71 O
ATOM 27 O5' C B 44 -11.145 42.458 -7.778 1.00 32.24 O
TER
Atoms:
OP1: (-9.136,47.243,4.352)
OP2: (-9.118,45.166,5.859)
C3': (-13.305,43.958,3.823)
C1': (-14.097,45.390,2.085)
C5': (-11.936,45.813,4.915)
O4': (-13.426,46.176,3.051)
C8: (-12.115,46.058,0.669)
O2': (-15.664,43.965,3.194)
C6: (-12.594,44.613,-2.503)
C5: (-12.543,45.124,-1.191)
C4: (-13.590,44.799,-0.349)
P: (-9.352,45.792,4.538)
C4': (-13.244,45.411,4.265)
C2': (-14.341,44.015,2.703)
C2: (-14.596,43.618,-1.919)
N1: (-13.654,43.850,-2.840)
N3: (-14.656,44.042,-0.656)
N6: (-11.649,44.849,-3.419)
N7: (-11.618,45.919,-0.537)
N9: (-13.303,45.408,0.856)
O5': (-10.846,45.461,4.077)
O3': (-13.738,43.152,4.912)
OP2: (-9.118,45.166,5.859)
C3': (-13.305,43.958,3.823)
C1': (-14.097,45.390,2.085)
C5': (-11.936,45.813,4.915)
O4': (-13.426,46.176,3.051)
C8: (-12.115,46.058,0.669)
O2': (-15.664,43.965,3.194)
C6: (-12.594,44.613,-2.503)
C5: (-12.543,45.124,-1.191)
C4: (-13.590,44.799,-0.349)
P: (-9.352,45.792,4.538)
C4': (-13.244,45.411,4.265)
C2': (-14.341,44.015,2.703)
C2: (-14.596,43.618,-1.919)
N1: (-13.654,43.850,-2.840)
N3: (-14.656,44.042,-0.656)
N6: (-11.649,44.849,-3.419)
N7: (-11.618,45.919,-0.537)
N9: (-13.303,45.408,0.856)
O5': (-10.846,45.461,4.077)
O3': (-13.738,43.152,4.912)
OP1: (-9.292,50.557,-6.334)
OP2: (-8.586,48.175,-5.717)
C3': (-12.176,45.287,-7.804)
C1': (-13.835,46.615,-8.859)
C5': (-10.500,47.218,-7.701)
O4': (-12.798,47.472,-8.420)
C8: (-12.804,47.083,-11.117)
O2': (-14.458,45.296,-6.956)
C6: (-14.932,45.649,-13.516)
C5: (-14.185,46.167,-12.442)
C4: (-14.678,45.952,-11.170)
P: (-9.049,49.151,-6.727)
C4': (-11.932,46.758,-7.507)
C2': (-13.664,45.287,-8.127)
C2: (-16.425,44.853,-11.941)
N1: (-16.068,44.984,-13.224)
N3: (-15.803,45.294,-10.847)
N6: (-14.563,45.789,-14.792)
N7: (-13.000,46.879,-12.398)
N9: (-13.774,46.546,-10.317)
O5': (-10.384,48.604,-7.414)
O3': (-11.910,44.525,-6.640)
OP2: (-8.586,48.175,-5.717)
C3': (-12.176,45.287,-7.804)
C1': (-13.835,46.615,-8.859)
C5': (-10.500,47.218,-7.701)
O4': (-12.798,47.472,-8.420)
C8: (-12.804,47.083,-11.117)
O2': (-14.458,45.296,-6.956)
C6: (-14.932,45.649,-13.516)
C5: (-14.185,46.167,-12.442)
C4: (-14.678,45.952,-11.170)
P: (-9.049,49.151,-6.727)
C4': (-11.932,46.758,-7.507)
C2': (-13.664,45.287,-8.127)
C2: (-16.425,44.853,-11.941)
N1: (-16.068,44.984,-13.224)
N3: (-15.803,45.294,-10.847)
N6: (-14.563,45.789,-14.792)
N7: (-13.000,46.879,-12.398)
N9: (-13.774,46.546,-10.317)
O5': (-10.384,48.604,-7.414)
O3': (-11.910,44.525,-6.640)
Image (generated by PyMOL):