Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0307:0306
Extra
PDB:
ATOM 1 O3' U A 306 9.309 137.903 41.610 1.00 61.10 O
ATOM 2 P A A 307 8.958 136.344 41.272 1.00 58.55 P
ATOM 3 OP1 A A 307 10.148 135.519 40.936 1.00 58.16 O
ATOM 4 OP2 A A 307 7.826 136.397 40.316 1.00 59.59 O
ATOM 5 O5' A A 307 8.349 135.778 42.629 1.00 55.61 O
ATOM 6 C5' A A 307 9.182 135.230 43.664 1.00 52.01 C
ATOM 7 C4' A A 307 8.481 135.356 44.992 1.00 51.70 C
ATOM 8 O4' A A 307 8.399 136.759 45.338 1.00 51.19 O
ATOM 9 C3' A A 307 7.037 134.879 44.981 1.00 52.66 C
ATOM 10 O3' A A 307 6.947 133.479 45.216 1.00 55.68 O
ATOM 11 C2' A A 307 6.398 135.709 46.082 1.00 51.60 C
ATOM 12 O2' A A 307 6.663 135.193 47.369 1.00 51.38 O
ATOM 13 C1' A A 307 7.133 137.041 45.913 1.00 51.38 C
ATOM 14 N9 A A 307 6.460 138.038 45.069 1.00 50.65 N
ATOM 15 C8 A A 307 6.905 138.567 43.879 1.00 50.01 C
ATOM 16 N7 A A 307 6.114 139.481 43.375 1.00 48.94 N
ATOM 17 C5 A A 307 5.070 139.554 44.285 1.00 48.69 C
ATOM 18 C6 A A 307 3.913 140.344 44.327 1.00 48.70 C
ATOM 19 N6 A A 307 3.612 141.267 43.411 1.00 48.25 N
ATOM 20 N1 A A 307 3.066 140.161 45.361 1.00 48.99 N
ATOM 21 C2 A A 307 3.379 139.252 46.293 1.00 49.99 C
ATOM 22 N3 A A 307 4.444 138.459 46.372 1.00 50.05 N
ATOM 23 C4 A A 307 5.261 138.660 45.325 1.00 49.35 C
ATOM 24 P G A 308 5.905 132.595 44.369 1.00 58.01 P
ATOM 25 OP1 G A 308 6.148 131.166 44.712 1.00 58.43 O
ATOM 26 OP2 G A 308 5.967 133.023 42.943 1.00 58.93 O
ATOM 27 O5' G A 308 4.493 133.017 44.971 1.00 57.13 O
TER
ATOM 1 O3' A B 305 9.183 142.170 40.520 1.00 49.55 O
ATOM 2 P U B 306 9.356 141.854 38.959 1.00 52.25 P
ATOM 3 OP1 U B 306 9.996 143.031 38.335 1.00 52.26 O
ATOM 4 OP2 U B 306 8.045 141.368 38.448 1.00 52.09 O
ATOM 5 O5' U B 306 10.420 140.663 38.934 1.00 54.34 O
ATOM 6 C5' U B 306 10.027 139.284 38.717 1.00 57.15 C
ATOM 7 C4' U B 306 10.799 138.356 39.641 1.00 59.35 C
ATOM 8 O4' U B 306 12.224 138.617 39.501 1.00 60.03 O
ATOM 9 C3' U B 306 10.533 138.529 41.134 1.00 61.28 C
ATOM 10 O3' U B 306 9.309 137.903 41.610 1.00 61.10 O
ATOM 11 C2' U B 306 11.824 138.064 41.804 1.00 62.48 C
ATOM 12 O2' U B 306 11.894 136.688 42.088 1.00 67.03 O
ATOM 13 C1' U B 306 12.875 138.403 40.746 1.00 62.17 C
ATOM 14 N1 U B 306 13.759 139.540 41.054 1.00 62.48 N
ATOM 15 C2 U B 306 15.092 139.264 41.330 1.00 63.03 C
ATOM 16 O2 U B 306 15.555 138.135 41.337 1.00 63.15 O
ATOM 17 N3 U B 306 15.867 140.363 41.602 1.00 63.35 N
ATOM 18 C4 U B 306 15.463 141.678 41.626 1.00 64.63 C
ATOM 19 O4 U B 306 16.291 142.563 41.862 1.00 65.79 O
ATOM 20 C5 U B 306 14.078 141.880 41.339 1.00 64.31 C
ATOM 21 C6 U B 306 13.294 140.831 41.071 1.00 63.83 C
ATOM 22 P A B 307 8.958 136.344 41.272 1.00 58.55 P
ATOM 23 OP1 A B 307 10.148 135.519 40.936 1.00 58.16 O
ATOM 24 OP2 A B 307 7.826 136.397 40.316 1.00 59.59 O
ATOM 25 O5' A B 307 8.349 135.778 42.629 1.00 55.61 O
TER
ATOM 2 P A A 307 8.958 136.344 41.272 1.00 58.55 P
ATOM 3 OP1 A A 307 10.148 135.519 40.936 1.00 58.16 O
ATOM 4 OP2 A A 307 7.826 136.397 40.316 1.00 59.59 O
ATOM 5 O5' A A 307 8.349 135.778 42.629 1.00 55.61 O
ATOM 6 C5' A A 307 9.182 135.230 43.664 1.00 52.01 C
ATOM 7 C4' A A 307 8.481 135.356 44.992 1.00 51.70 C
ATOM 8 O4' A A 307 8.399 136.759 45.338 1.00 51.19 O
ATOM 9 C3' A A 307 7.037 134.879 44.981 1.00 52.66 C
ATOM 10 O3' A A 307 6.947 133.479 45.216 1.00 55.68 O
ATOM 11 C2' A A 307 6.398 135.709 46.082 1.00 51.60 C
ATOM 12 O2' A A 307 6.663 135.193 47.369 1.00 51.38 O
ATOM 13 C1' A A 307 7.133 137.041 45.913 1.00 51.38 C
ATOM 14 N9 A A 307 6.460 138.038 45.069 1.00 50.65 N
ATOM 15 C8 A A 307 6.905 138.567 43.879 1.00 50.01 C
ATOM 16 N7 A A 307 6.114 139.481 43.375 1.00 48.94 N
ATOM 17 C5 A A 307 5.070 139.554 44.285 1.00 48.69 C
ATOM 18 C6 A A 307 3.913 140.344 44.327 1.00 48.70 C
ATOM 19 N6 A A 307 3.612 141.267 43.411 1.00 48.25 N
ATOM 20 N1 A A 307 3.066 140.161 45.361 1.00 48.99 N
ATOM 21 C2 A A 307 3.379 139.252 46.293 1.00 49.99 C
ATOM 22 N3 A A 307 4.444 138.459 46.372 1.00 50.05 N
ATOM 23 C4 A A 307 5.261 138.660 45.325 1.00 49.35 C
ATOM 24 P G A 308 5.905 132.595 44.369 1.00 58.01 P
ATOM 25 OP1 G A 308 6.148 131.166 44.712 1.00 58.43 O
ATOM 26 OP2 G A 308 5.967 133.023 42.943 1.00 58.93 O
ATOM 27 O5' G A 308 4.493 133.017 44.971 1.00 57.13 O
TER
ATOM 1 O3' A B 305 9.183 142.170 40.520 1.00 49.55 O
ATOM 2 P U B 306 9.356 141.854 38.959 1.00 52.25 P
ATOM 3 OP1 U B 306 9.996 143.031 38.335 1.00 52.26 O
ATOM 4 OP2 U B 306 8.045 141.368 38.448 1.00 52.09 O
ATOM 5 O5' U B 306 10.420 140.663 38.934 1.00 54.34 O
ATOM 6 C5' U B 306 10.027 139.284 38.717 1.00 57.15 C
ATOM 7 C4' U B 306 10.799 138.356 39.641 1.00 59.35 C
ATOM 8 O4' U B 306 12.224 138.617 39.501 1.00 60.03 O
ATOM 9 C3' U B 306 10.533 138.529 41.134 1.00 61.28 C
ATOM 10 O3' U B 306 9.309 137.903 41.610 1.00 61.10 O
ATOM 11 C2' U B 306 11.824 138.064 41.804 1.00 62.48 C
ATOM 12 O2' U B 306 11.894 136.688 42.088 1.00 67.03 O
ATOM 13 C1' U B 306 12.875 138.403 40.746 1.00 62.17 C
ATOM 14 N1 U B 306 13.759 139.540 41.054 1.00 62.48 N
ATOM 15 C2 U B 306 15.092 139.264 41.330 1.00 63.03 C
ATOM 16 O2 U B 306 15.555 138.135 41.337 1.00 63.15 O
ATOM 17 N3 U B 306 15.867 140.363 41.602 1.00 63.35 N
ATOM 18 C4 U B 306 15.463 141.678 41.626 1.00 64.63 C
ATOM 19 O4 U B 306 16.291 142.563 41.862 1.00 65.79 O
ATOM 20 C5 U B 306 14.078 141.880 41.339 1.00 64.31 C
ATOM 21 C6 U B 306 13.294 140.831 41.071 1.00 63.83 C
ATOM 22 P A B 307 8.958 136.344 41.272 1.00 58.55 P
ATOM 23 OP1 A B 307 10.148 135.519 40.936 1.00 58.16 O
ATOM 24 OP2 A B 307 7.826 136.397 40.316 1.00 59.59 O
ATOM 25 O5' A B 307 8.349 135.778 42.629 1.00 55.61 O
TER
Atoms:
OP1: (10.148,135.519,40.936)
OP2: (7.826,136.397,40.316)
C3': (7.037,134.879,44.981)
C1': (7.133,137.041,45.913)
C5': (9.182,135.230,43.664)
O4': (8.399,136.759,45.338)
C8: (6.905,138.567,43.879)
O2': (6.663,135.193,47.369)
C6: (3.913,140.344,44.327)
C5: (5.070,139.554,44.285)
C4: (5.261,138.660,45.325)
P: (8.958,136.344,41.272)
C4': (8.481,135.356,44.992)
C2': (6.398,135.709,46.082)
C2: (3.379,139.252,46.293)
N1: (3.066,140.161,45.361)
N3: (4.444,138.459,46.372)
N6: (3.612,141.267,43.411)
N7: (6.114,139.481,43.375)
N9: (6.460,138.038,45.069)
O5': (8.349,135.778,42.629)
O3': (6.947,133.479,45.216)
OP2: (7.826,136.397,40.316)
C3': (7.037,134.879,44.981)
C1': (7.133,137.041,45.913)
C5': (9.182,135.230,43.664)
O4': (8.399,136.759,45.338)
C8: (6.905,138.567,43.879)
O2': (6.663,135.193,47.369)
C6: (3.913,140.344,44.327)
C5: (5.070,139.554,44.285)
C4: (5.261,138.660,45.325)
P: (8.958,136.344,41.272)
C4': (8.481,135.356,44.992)
C2': (6.398,135.709,46.082)
C2: (3.379,139.252,46.293)
N1: (3.066,140.161,45.361)
N3: (4.444,138.459,46.372)
N6: (3.612,141.267,43.411)
N7: (6.114,139.481,43.375)
N9: (6.460,138.038,45.069)
O5': (8.349,135.778,42.629)
O3': (6.947,133.479,45.216)
C4: (15.463,141.678,41.626)
N3: (15.867,140.363,41.602)
OP1: (9.996,143.031,38.335)
OP2: (8.045,141.368,38.448)
C2: (15.092,139.264,41.330)
C1': (12.875,138.403,40.746)
C3': (10.533,138.529,41.134)
O5': (10.420,140.663,38.934)
O4': (12.224,138.617,39.501)
C5': (10.027,139.284,38.717)
P: (9.356,141.854,38.959)
C4': (10.799,138.356,39.641)
C2': (11.824,138.064,41.804)
O2': (11.894,136.688,42.088)
N1: (13.759,139.540,41.054)
O4: (16.291,142.563,41.862)
O2: (15.555,138.135,41.337)
C6: (13.294,140.831,41.071)
C5: (14.078,141.880,41.339)
O3': (9.309,137.903,41.610)
N3: (15.867,140.363,41.602)
OP1: (9.996,143.031,38.335)
OP2: (8.045,141.368,38.448)
C2: (15.092,139.264,41.330)
C1': (12.875,138.403,40.746)
C3': (10.533,138.529,41.134)
O5': (10.420,140.663,38.934)
O4': (12.224,138.617,39.501)
C5': (10.027,139.284,38.717)
P: (9.356,141.854,38.959)
C4': (10.799,138.356,39.641)
C2': (11.824,138.064,41.804)
O2': (11.894,136.688,42.088)
N1: (13.759,139.540,41.054)
O4: (16.291,142.563,41.862)
O2: (15.555,138.135,41.337)
C6: (13.294,140.831,41.071)
C5: (14.078,141.880,41.339)
O3': (9.309,137.903,41.610)
Image (generated by PyMOL):