Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01914:01913
Extra
PDB:
ATOM 1 O3' U A1913 112.898 96.269 89.650 1.00 92.83 O
ATOM 2 P A A1914 114.393 95.731 89.423 1.00 90.63 P
ATOM 3 OP1 A A1914 114.554 95.424 87.975 1.00 90.31 O
ATOM 4 OP2 A A1914 114.643 94.675 90.441 1.00 91.62 O
ATOM 5 O5' A A1914 115.325 96.972 89.777 1.00 87.34 O
ATOM 6 C5' A A1914 116.619 97.118 89.171 1.00 81.24 C
ATOM 7 C4' A A1914 117.048 98.561 89.218 1.00 78.15 C
ATOM 8 O4' A A1914 116.067 99.375 88.530 1.00 77.25 O
ATOM 9 C3' A A1914 117.136 99.163 90.607 1.00 76.15 C
ATOM 10 O3' A A1914 118.411 98.867 91.166 1.00 77.06 O
ATOM 11 C2' A A1914 116.952 100.651 90.332 1.00 75.31 C
ATOM 12 O2' A A1914 118.128 101.270 89.852 1.00 72.45 O
ATOM 13 C1' A A1914 115.934 100.623 89.188 1.00 76.00 C
ATOM 14 N9 A A1914 114.527 100.802 89.565 1.00 75.89 N
ATOM 15 C8 A A1914 113.539 99.850 89.602 1.00 76.06 C
ATOM 16 N7 A A1914 112.361 100.321 89.927 1.00 75.92 N
ATOM 17 C5 A A1914 112.588 101.672 90.127 1.00 75.78 C
ATOM 18 C6 A A1914 111.737 102.724 90.482 1.00 76.64 C
ATOM 19 N6 A A1914 110.427 102.580 90.686 1.00 78.11 N
ATOM 20 N1 A A1914 112.279 103.951 90.616 1.00 76.97 N
ATOM 21 C2 A A1914 113.588 104.098 90.393 1.00 76.66 C
ATOM 22 N3 A A1914 114.488 103.189 90.043 1.00 75.82 N
ATOM 23 C4 A A1914 113.918 101.981 89.924 1.00 75.41 C
ATOM 24 P A A1915 118.547 98.523 92.730 1.00 77.80 P
ATOM 25 OP1 A A1915 119.862 97.842 92.926 1.00 78.29 O
ATOM 26 OP2 A A1915 117.295 97.856 93.187 1.00 77.52 O
ATOM 27 O5' A A1915 118.634 99.946 93.433 1.00 75.10 O
TER
ATOM 1 O3' U B1912 108.654 92.120 92.433 1.00101.89 O
ATOM 2 P U B1913 109.233 92.177 90.930 1.00102.73 P
ATOM 3 OP1 U B1913 108.127 91.758 90.025 1.00102.72 O
ATOM 4 OP2 U B1913 110.536 91.449 90.891 1.00101.93 O
ATOM 5 O5' U B1913 109.518 93.728 90.679 1.00102.08 O
ATOM 6 C5' U B1913 109.791 94.235 89.350 1.00 99.57 C
ATOM 7 C4' U B1913 110.622 95.504 89.421 1.00 97.48 C
ATOM 8 O4' U B1913 109.847 96.568 90.045 1.00 97.15 O
ATOM 9 C3' U B1913 111.918 95.408 90.220 1.00 96.04 C
ATOM 10 O3' U B1913 112.898 96.269 89.650 1.00 92.83 O
ATOM 11 C2' U B1913 111.501 95.942 91.586 1.00 96.41 C
ATOM 12 O2' U B1913 112.585 96.433 92.351 1.00 96.31 O
ATOM 13 C1' U B1913 110.542 97.059 91.179 1.00 96.94 C
ATOM 14 N1 U B1913 109.564 97.439 92.215 1.00 98.04 N
ATOM 15 C2 U B1913 110.014 98.226 93.268 1.00 98.33 C
ATOM 16 O2 U B1913 111.172 98.607 93.366 1.00 98.90 O
ATOM 17 N3 U B1913 109.058 98.546 94.202 1.00 97.43 N
ATOM 18 C4 U B1913 107.730 98.172 94.199 1.00 96.87 C
ATOM 19 O4 U B1913 107.007 98.506 95.138 1.00 96.24 O
ATOM 20 C5 U B1913 107.337 97.367 93.083 1.00 97.31 C
ATOM 21 C6 U B1913 108.242 97.034 92.152 1.00 98.25 C
ATOM 22 P A B1914 114.393 95.731 89.423 1.00 90.63 P
ATOM 23 OP1 A B1914 114.554 95.424 87.975 1.00 90.31 O
ATOM 24 OP2 A B1914 114.643 94.675 90.441 1.00 91.62 O
ATOM 25 O5' A B1914 115.325 96.972 89.777 1.00 87.34 O
TER
ATOM 2 P A A1914 114.393 95.731 89.423 1.00 90.63 P
ATOM 3 OP1 A A1914 114.554 95.424 87.975 1.00 90.31 O
ATOM 4 OP2 A A1914 114.643 94.675 90.441 1.00 91.62 O
ATOM 5 O5' A A1914 115.325 96.972 89.777 1.00 87.34 O
ATOM 6 C5' A A1914 116.619 97.118 89.171 1.00 81.24 C
ATOM 7 C4' A A1914 117.048 98.561 89.218 1.00 78.15 C
ATOM 8 O4' A A1914 116.067 99.375 88.530 1.00 77.25 O
ATOM 9 C3' A A1914 117.136 99.163 90.607 1.00 76.15 C
ATOM 10 O3' A A1914 118.411 98.867 91.166 1.00 77.06 O
ATOM 11 C2' A A1914 116.952 100.651 90.332 1.00 75.31 C
ATOM 12 O2' A A1914 118.128 101.270 89.852 1.00 72.45 O
ATOM 13 C1' A A1914 115.934 100.623 89.188 1.00 76.00 C
ATOM 14 N9 A A1914 114.527 100.802 89.565 1.00 75.89 N
ATOM 15 C8 A A1914 113.539 99.850 89.602 1.00 76.06 C
ATOM 16 N7 A A1914 112.361 100.321 89.927 1.00 75.92 N
ATOM 17 C5 A A1914 112.588 101.672 90.127 1.00 75.78 C
ATOM 18 C6 A A1914 111.737 102.724 90.482 1.00 76.64 C
ATOM 19 N6 A A1914 110.427 102.580 90.686 1.00 78.11 N
ATOM 20 N1 A A1914 112.279 103.951 90.616 1.00 76.97 N
ATOM 21 C2 A A1914 113.588 104.098 90.393 1.00 76.66 C
ATOM 22 N3 A A1914 114.488 103.189 90.043 1.00 75.82 N
ATOM 23 C4 A A1914 113.918 101.981 89.924 1.00 75.41 C
ATOM 24 P A A1915 118.547 98.523 92.730 1.00 77.80 P
ATOM 25 OP1 A A1915 119.862 97.842 92.926 1.00 78.29 O
ATOM 26 OP2 A A1915 117.295 97.856 93.187 1.00 77.52 O
ATOM 27 O5' A A1915 118.634 99.946 93.433 1.00 75.10 O
TER
ATOM 1 O3' U B1912 108.654 92.120 92.433 1.00101.89 O
ATOM 2 P U B1913 109.233 92.177 90.930 1.00102.73 P
ATOM 3 OP1 U B1913 108.127 91.758 90.025 1.00102.72 O
ATOM 4 OP2 U B1913 110.536 91.449 90.891 1.00101.93 O
ATOM 5 O5' U B1913 109.518 93.728 90.679 1.00102.08 O
ATOM 6 C5' U B1913 109.791 94.235 89.350 1.00 99.57 C
ATOM 7 C4' U B1913 110.622 95.504 89.421 1.00 97.48 C
ATOM 8 O4' U B1913 109.847 96.568 90.045 1.00 97.15 O
ATOM 9 C3' U B1913 111.918 95.408 90.220 1.00 96.04 C
ATOM 10 O3' U B1913 112.898 96.269 89.650 1.00 92.83 O
ATOM 11 C2' U B1913 111.501 95.942 91.586 1.00 96.41 C
ATOM 12 O2' U B1913 112.585 96.433 92.351 1.00 96.31 O
ATOM 13 C1' U B1913 110.542 97.059 91.179 1.00 96.94 C
ATOM 14 N1 U B1913 109.564 97.439 92.215 1.00 98.04 N
ATOM 15 C2 U B1913 110.014 98.226 93.268 1.00 98.33 C
ATOM 16 O2 U B1913 111.172 98.607 93.366 1.00 98.90 O
ATOM 17 N3 U B1913 109.058 98.546 94.202 1.00 97.43 N
ATOM 18 C4 U B1913 107.730 98.172 94.199 1.00 96.87 C
ATOM 19 O4 U B1913 107.007 98.506 95.138 1.00 96.24 O
ATOM 20 C5 U B1913 107.337 97.367 93.083 1.00 97.31 C
ATOM 21 C6 U B1913 108.242 97.034 92.152 1.00 98.25 C
ATOM 22 P A B1914 114.393 95.731 89.423 1.00 90.63 P
ATOM 23 OP1 A B1914 114.554 95.424 87.975 1.00 90.31 O
ATOM 24 OP2 A B1914 114.643 94.675 90.441 1.00 91.62 O
ATOM 25 O5' A B1914 115.325 96.972 89.777 1.00 87.34 O
TER
Atoms:
OP1: (114.554,95.424,87.975)
OP2: (114.643,94.675,90.441)
C3': (117.136,99.163,90.607)
C1': (115.934,100.623,89.188)
C5': (116.619,97.118,89.171)
O4': (116.067,99.375,88.530)
C8: (113.539,99.850,89.602)
O2': (118.128,101.270,89.852)
C6: (111.737,102.724,90.482)
C5: (112.588,101.672,90.127)
C4: (113.918,101.981,89.924)
P: (114.393,95.731,89.423)
C4': (117.048,98.561,89.218)
C2': (116.952,100.651,90.332)
C2: (113.588,104.098,90.393)
N1: (112.279,103.951,90.616)
N3: (114.488,103.189,90.043)
N6: (110.427,102.580,90.686)
N7: (112.361,100.321,89.927)
N9: (114.527,100.802,89.565)
O5': (115.325,96.972,89.777)
O3': (118.411,98.867,91.166)
OP2: (114.643,94.675,90.441)
C3': (117.136,99.163,90.607)
C1': (115.934,100.623,89.188)
C5': (116.619,97.118,89.171)
O4': (116.067,99.375,88.530)
C8: (113.539,99.850,89.602)
O2': (118.128,101.270,89.852)
C6: (111.737,102.724,90.482)
C5: (112.588,101.672,90.127)
C4: (113.918,101.981,89.924)
P: (114.393,95.731,89.423)
C4': (117.048,98.561,89.218)
C2': (116.952,100.651,90.332)
C2: (113.588,104.098,90.393)
N1: (112.279,103.951,90.616)
N3: (114.488,103.189,90.043)
N6: (110.427,102.580,90.686)
N7: (112.361,100.321,89.927)
N9: (114.527,100.802,89.565)
O5': (115.325,96.972,89.777)
O3': (118.411,98.867,91.166)
C4: (107.730,98.172,94.199)
N3: (109.058,98.546,94.202)
OP1: (108.127,91.758,90.025)
OP2: (110.536,91.449,90.891)
C2: (110.014,98.226,93.268)
C1': (110.542,97.059,91.179)
C3': (111.918,95.408,90.220)
O5': (109.518,93.728,90.679)
O4': (109.847,96.568,90.045)
C5': (109.791,94.235,89.350)
P: (109.233,92.177,90.930)
C4': (110.622,95.504,89.421)
C2': (111.501,95.942,91.586)
O2': (112.585,96.433,92.351)
N1: (109.564,97.439,92.215)
O4: (107.007,98.506,95.138)
O2: (111.172,98.607,93.366)
C6: (108.242,97.034,92.152)
C5: (107.337,97.367,93.083)
O3': (112.898,96.269,89.650)
N3: (109.058,98.546,94.202)
OP1: (108.127,91.758,90.025)
OP2: (110.536,91.449,90.891)
C2: (110.014,98.226,93.268)
C1': (110.542,97.059,91.179)
C3': (111.918,95.408,90.220)
O5': (109.518,93.728,90.679)
O4': (109.847,96.568,90.045)
C5': (109.791,94.235,89.350)
P: (109.233,92.177,90.930)
C4': (110.622,95.504,89.421)
C2': (111.501,95.942,91.586)
O2': (112.585,96.433,92.351)
N1: (109.564,97.439,92.215)
O4: (107.007,98.506,95.138)
O2: (111.172,98.607,93.366)
C6: (108.242,97.034,92.152)
C5: (107.337,97.367,93.083)
O3': (112.898,96.269,89.650)
Image (generated by PyMOL):