Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1234:A1233
Extra
PDB:
ATOM 1 O3' U A1233 -39.629 167.804 210.044 1.00 16.58 O
ATOM 2 P A A1234 -40.783 168.930 210.031 1.00 16.35 P
ATOM 3 OP1 A A1234 -41.885 168.425 209.178 1.00 16.35 O
ATOM 4 OP2 A A1234 -40.127 170.218 209.660 1.00 16.35 O
ATOM 5 O5' A A1234 -41.264 168.957 211.557 1.00 16.35 O
ATOM 6 C5' A A1234 -42.134 167.966 212.080 1.00 16.35 C
ATOM 7 C4' A A1234 -42.848 168.474 213.308 1.00 16.35 C
ATOM 8 O4' A A1234 -41.959 169.358 214.037 1.00 16.35 O
ATOM 9 C3' A A1234 -44.101 169.322 213.055 1.00 16.35 C
ATOM 10 O3' A A1234 -45.274 168.552 212.874 1.00 16.35 O
ATOM 11 C2' A A1234 -44.164 170.236 214.271 1.00 16.35 C
ATOM 12 O2' A A1234 -44.770 169.591 215.373 1.00 16.35 O
ATOM 13 C1' A A1234 -42.686 170.453 214.575 1.00 16.35 C
ATOM 14 N9 A A1234 -42.199 171.700 213.963 1.00 17.11 N
ATOM 15 C8 A A1234 -41.267 171.889 212.982 1.00 17.11 C
ATOM 16 N7 A A1234 -41.117 173.149 212.663 1.00 17.11 N
ATOM 17 C5 A A1234 -42.011 173.831 213.471 1.00 17.11 C
ATOM 18 C6 A A1234 -42.331 175.193 213.610 1.00 17.11 C
ATOM 19 N6 A A1234 -41.760 176.180 212.913 1.00 17.11 N
ATOM 20 N1 A A1234 -43.278 175.526 214.511 1.00 17.11 N
ATOM 21 C2 A A1234 -43.852 174.548 215.229 1.00 17.11 C
ATOM 22 N3 A A1234 -43.631 173.231 215.188 1.00 17.11 N
ATOM 23 C4 A A1234 -42.687 172.942 214.275 1.00 17.11 C
ATOM 24 P U A1235 -46.144 168.718 211.535 1.00 18.69 P
ATOM 25 OP1 U A1235 -47.275 167.773 211.625 1.00 18.69 O
ATOM 26 OP2 U A1235 -45.209 168.610 210.393 1.00 18.69 O
ATOM 27 O5' U A1235 -46.684 170.200 211.646 1.00 18.69 O
TER
ATOM 1 O3' G B1232 -34.396 164.646 209.691 1.00 3.80 O
ATOM 2 P U B1233 -35.076 165.562 208.560 1.00 16.58 P
ATOM 3 OP1 U B1233 -35.868 164.652 207.670 1.00 16.58 O
ATOM 4 OP2 U B1233 -33.986 166.399 207.970 1.00 16.58 O
ATOM 5 O5' U B1233 -36.054 166.473 209.389 1.00 16.58 O
ATOM 6 C5' U B1233 -37.022 165.899 210.230 1.00 16.58 C
ATOM 7 C4' U B1233 -37.608 166.945 211.105 1.00 16.58 C
ATOM 8 O4' U B1233 -36.553 167.539 211.883 1.00 16.58 O
ATOM 9 C3' U B1233 -38.261 168.098 210.361 1.00 16.58 C
ATOM 10 O3' U B1233 -39.629 167.804 210.044 1.00 16.58 O
ATOM 11 C2' U B1233 -38.040 169.304 211.280 1.00 16.58 C
ATOM 12 O2' U B1233 -39.108 169.452 212.214 1.00 16.58 O
ATOM 13 C1' U B1233 -36.779 168.907 212.057 1.00 16.58 C
ATOM 14 N1 U B1233 -35.568 169.637 211.647 1.00 16.70 N
ATOM 15 C2 U B1233 -35.377 170.826 212.286 1.00 16.70 C
ATOM 16 O2 U B1233 -36.211 171.263 213.048 1.00 16.70 O
ATOM 17 N3 U B1233 -34.235 171.509 211.984 1.00 16.70 N
ATOM 18 C4 U B1233 -33.232 171.112 211.133 1.00 16.70 C
ATOM 19 O4 U B1233 -32.242 171.867 210.975 1.00 16.70 O
ATOM 20 C5 U B1233 -33.485 169.817 210.532 1.00 16.70 C
ATOM 21 C6 U B1233 -34.612 169.134 210.810 1.00 16.70 C
ATOM 22 P A B1234 -40.783 168.930 210.031 1.00 16.35 P
ATOM 23 OP1 A B1234 -41.885 168.425 209.178 1.00 16.35 O
ATOM 24 OP2 A B1234 -40.127 170.218 209.660 1.00 16.35 O
ATOM 25 O5' A B1234 -41.264 168.957 211.557 1.00 16.35 O
TER
ATOM 2 P A A1234 -40.783 168.930 210.031 1.00 16.35 P
ATOM 3 OP1 A A1234 -41.885 168.425 209.178 1.00 16.35 O
ATOM 4 OP2 A A1234 -40.127 170.218 209.660 1.00 16.35 O
ATOM 5 O5' A A1234 -41.264 168.957 211.557 1.00 16.35 O
ATOM 6 C5' A A1234 -42.134 167.966 212.080 1.00 16.35 C
ATOM 7 C4' A A1234 -42.848 168.474 213.308 1.00 16.35 C
ATOM 8 O4' A A1234 -41.959 169.358 214.037 1.00 16.35 O
ATOM 9 C3' A A1234 -44.101 169.322 213.055 1.00 16.35 C
ATOM 10 O3' A A1234 -45.274 168.552 212.874 1.00 16.35 O
ATOM 11 C2' A A1234 -44.164 170.236 214.271 1.00 16.35 C
ATOM 12 O2' A A1234 -44.770 169.591 215.373 1.00 16.35 O
ATOM 13 C1' A A1234 -42.686 170.453 214.575 1.00 16.35 C
ATOM 14 N9 A A1234 -42.199 171.700 213.963 1.00 17.11 N
ATOM 15 C8 A A1234 -41.267 171.889 212.982 1.00 17.11 C
ATOM 16 N7 A A1234 -41.117 173.149 212.663 1.00 17.11 N
ATOM 17 C5 A A1234 -42.011 173.831 213.471 1.00 17.11 C
ATOM 18 C6 A A1234 -42.331 175.193 213.610 1.00 17.11 C
ATOM 19 N6 A A1234 -41.760 176.180 212.913 1.00 17.11 N
ATOM 20 N1 A A1234 -43.278 175.526 214.511 1.00 17.11 N
ATOM 21 C2 A A1234 -43.852 174.548 215.229 1.00 17.11 C
ATOM 22 N3 A A1234 -43.631 173.231 215.188 1.00 17.11 N
ATOM 23 C4 A A1234 -42.687 172.942 214.275 1.00 17.11 C
ATOM 24 P U A1235 -46.144 168.718 211.535 1.00 18.69 P
ATOM 25 OP1 U A1235 -47.275 167.773 211.625 1.00 18.69 O
ATOM 26 OP2 U A1235 -45.209 168.610 210.393 1.00 18.69 O
ATOM 27 O5' U A1235 -46.684 170.200 211.646 1.00 18.69 O
TER
ATOM 1 O3' G B1232 -34.396 164.646 209.691 1.00 3.80 O
ATOM 2 P U B1233 -35.076 165.562 208.560 1.00 16.58 P
ATOM 3 OP1 U B1233 -35.868 164.652 207.670 1.00 16.58 O
ATOM 4 OP2 U B1233 -33.986 166.399 207.970 1.00 16.58 O
ATOM 5 O5' U B1233 -36.054 166.473 209.389 1.00 16.58 O
ATOM 6 C5' U B1233 -37.022 165.899 210.230 1.00 16.58 C
ATOM 7 C4' U B1233 -37.608 166.945 211.105 1.00 16.58 C
ATOM 8 O4' U B1233 -36.553 167.539 211.883 1.00 16.58 O
ATOM 9 C3' U B1233 -38.261 168.098 210.361 1.00 16.58 C
ATOM 10 O3' U B1233 -39.629 167.804 210.044 1.00 16.58 O
ATOM 11 C2' U B1233 -38.040 169.304 211.280 1.00 16.58 C
ATOM 12 O2' U B1233 -39.108 169.452 212.214 1.00 16.58 O
ATOM 13 C1' U B1233 -36.779 168.907 212.057 1.00 16.58 C
ATOM 14 N1 U B1233 -35.568 169.637 211.647 1.00 16.70 N
ATOM 15 C2 U B1233 -35.377 170.826 212.286 1.00 16.70 C
ATOM 16 O2 U B1233 -36.211 171.263 213.048 1.00 16.70 O
ATOM 17 N3 U B1233 -34.235 171.509 211.984 1.00 16.70 N
ATOM 18 C4 U B1233 -33.232 171.112 211.133 1.00 16.70 C
ATOM 19 O4 U B1233 -32.242 171.867 210.975 1.00 16.70 O
ATOM 20 C5 U B1233 -33.485 169.817 210.532 1.00 16.70 C
ATOM 21 C6 U B1233 -34.612 169.134 210.810 1.00 16.70 C
ATOM 22 P A B1234 -40.783 168.930 210.031 1.00 16.35 P
ATOM 23 OP1 A B1234 -41.885 168.425 209.178 1.00 16.35 O
ATOM 24 OP2 A B1234 -40.127 170.218 209.660 1.00 16.35 O
ATOM 25 O5' A B1234 -41.264 168.957 211.557 1.00 16.35 O
TER
Atoms:
OP1: (-41.885,168.425,209.178)
OP2: (-40.127,170.218,209.660)
C3': (-44.101,169.322,213.055)
C1': (-42.686,170.453,214.575)
C5': (-42.134,167.966,212.080)
O4': (-41.959,169.358,214.037)
C8: (-41.267,171.889,212.982)
O2': (-44.770,169.591,215.373)
C6: (-42.331,175.193,213.610)
C5: (-42.011,173.831,213.471)
C4: (-42.687,172.942,214.275)
P: (-40.783,168.930,210.031)
C4': (-42.848,168.474,213.308)
C2': (-44.164,170.236,214.271)
C2: (-43.852,174.548,215.229)
N1: (-43.278,175.526,214.511)
N3: (-43.631,173.231,215.188)
N6: (-41.760,176.180,212.913)
N7: (-41.117,173.149,212.663)
N9: (-42.199,171.700,213.963)
O5': (-41.264,168.957,211.557)
O3': (-45.274,168.552,212.874)
OP2: (-40.127,170.218,209.660)
C3': (-44.101,169.322,213.055)
C1': (-42.686,170.453,214.575)
C5': (-42.134,167.966,212.080)
O4': (-41.959,169.358,214.037)
C8: (-41.267,171.889,212.982)
O2': (-44.770,169.591,215.373)
C6: (-42.331,175.193,213.610)
C5: (-42.011,173.831,213.471)
C4: (-42.687,172.942,214.275)
P: (-40.783,168.930,210.031)
C4': (-42.848,168.474,213.308)
C2': (-44.164,170.236,214.271)
C2: (-43.852,174.548,215.229)
N1: (-43.278,175.526,214.511)
N3: (-43.631,173.231,215.188)
N6: (-41.760,176.180,212.913)
N7: (-41.117,173.149,212.663)
N9: (-42.199,171.700,213.963)
O5': (-41.264,168.957,211.557)
O3': (-45.274,168.552,212.874)
C4: (-33.232,171.112,211.133)
N3: (-34.235,171.509,211.984)
OP1: (-35.868,164.652,207.670)
OP2: (-33.986,166.399,207.970)
C2: (-35.377,170.826,212.286)
C1': (-36.779,168.907,212.057)
C3': (-38.261,168.098,210.361)
O5': (-36.054,166.473,209.389)
O4': (-36.553,167.539,211.883)
C5': (-37.022,165.899,210.230)
P: (-35.076,165.562,208.560)
C4': (-37.608,166.945,211.105)
C2': (-38.040,169.304,211.280)
O2': (-39.108,169.452,212.214)
N1: (-35.568,169.637,211.647)
O4: (-32.242,171.867,210.975)
O2: (-36.211,171.263,213.048)
C6: (-34.612,169.134,210.810)
C5: (-33.485,169.817,210.532)
O3': (-39.629,167.804,210.044)
N3: (-34.235,171.509,211.984)
OP1: (-35.868,164.652,207.670)
OP2: (-33.986,166.399,207.970)
C2: (-35.377,170.826,212.286)
C1': (-36.779,168.907,212.057)
C3': (-38.261,168.098,210.361)
O5': (-36.054,166.473,209.389)
O4': (-36.553,167.539,211.883)
C5': (-37.022,165.899,210.230)
P: (-35.076,165.562,208.560)
C4': (-37.608,166.945,211.105)
C2': (-38.040,169.304,211.280)
O2': (-39.108,169.452,212.214)
N1: (-35.568,169.637,211.647)
O4: (-32.242,171.867,210.975)
O2: (-36.211,171.263,213.048)
C6: (-34.612,169.134,210.810)
C5: (-33.485,169.817,210.532)
O3': (-39.629,167.804,210.044)
Image (generated by PyMOL):