Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61625:61624
Extra
PDB:
ATOM 1 O3' U A1624 242.681 -3.734 237.006 1.00 52.99 O
ATOM 2 P A A1625 243.251 -2.554 237.904 1.00 50.18 P
ATOM 3 OP1 A A1625 242.874 -1.262 237.234 1.00 50.15 O
ATOM 4 OP2 A A1625 244.697 -2.852 238.165 1.00 50.24 O
ATOM 5 O5' A A1625 242.419 -2.715 239.237 1.00 50.25 O
ATOM 6 C5' A A1625 242.251 -1.633 240.123 1.00 50.32 C
ATOM 7 C4' A A1625 240.885 -1.653 240.688 1.00 50.38 C
ATOM 8 O4' A A1625 239.957 -1.319 239.639 1.00 50.33 O
ATOM 9 C3' A A1625 240.441 -3.004 241.224 1.00 50.41 C
ATOM 10 O3' A A1625 239.610 -2.788 242.331 1.00 50.55 O
ATOM 11 C2' A A1625 239.621 -3.575 240.080 1.00 50.35 C
ATOM 12 O2' A A1625 238.660 -4.510 240.468 1.00 50.42 O
ATOM 13 C1' A A1625 238.986 -2.322 239.521 1.00 50.35 C
ATOM 14 N9 A A1625 238.643 -2.410 238.118 1.00 50.27 N
ATOM 15 C8 A A1625 239.500 -2.347 237.051 1.00 50.17 C
ATOM 16 N7 A A1625 238.869 -2.414 235.906 1.00 50.15 N
ATOM 17 C5 A A1625 237.522 -2.495 236.261 1.00 50.23 C
ATOM 18 C6 A A1625 236.340 -2.625 235.512 1.00 50.28 C
ATOM 19 N6 A A1625 236.241 -2.677 234.190 1.00 50.24 N
ATOM 20 N1 A A1625 235.221 -2.725 236.223 1.00 50.42 N
ATOM 21 C2 A A1625 235.260 -2.688 237.565 1.00 50.49 C
ATOM 22 N3 A A1625 236.272 -2.582 238.386 1.00 50.45 N
ATOM 23 C4 A A1625 237.376 -2.495 237.641 1.00 50.32 C
ATOM 24 P C A1626 240.277 -2.665 243.764 1.00 56.03 P
ATOM 25 OP1 C A1626 239.275 -2.021 244.670 1.00 56.20 O
ATOM 26 OP2 C A1626 241.587 -2.023 243.582 1.00 55.99 O
ATOM 27 O5' C A1626 240.498 -4.197 244.169 1.00 56.02 O
TER
ATOM 1 O3' G B1623 245.284 -6.341 232.357 1.00 54.09 O
ATOM 2 P U B1624 245.528 -5.117 233.376 1.00 53.08 P
ATOM 3 OP1 U B1624 244.876 -3.959 232.830 1.00 53.00 O
ATOM 4 OP2 U B1624 246.967 -5.039 233.651 1.00 53.18 O
ATOM 5 O5' U B1624 244.730 -5.569 234.652 1.00 53.04 O
ATOM 6 C5' U B1624 243.319 -5.668 234.589 1.00 52.99 C
ATOM 7 C4' U B1624 242.740 -5.879 235.940 1.00 53.00 C
ATOM 8 O4' U B1624 243.028 -7.224 236.394 1.00 53.05 O
ATOM 9 C3' U B1624 243.315 -4.987 236.999 1.00 53.02 C
ATOM 10 O3' U B1624 242.681 -3.734 237.006 1.00 52.99 O
ATOM 11 C2' U B1624 243.116 -5.797 238.269 1.00 53.07 C
ATOM 12 O2' U B1624 241.763 -5.725 238.682 1.00 53.07 O
ATOM 13 C1' U B1624 243.367 -7.212 237.758 1.00 53.08 C
ATOM 14 N1 U B1624 244.782 -7.627 237.889 1.00 53.14 N
ATOM 15 C2 U B1624 245.155 -8.282 239.049 1.00 53.20 C
ATOM 16 O2 U B1624 244.413 -8.495 239.957 1.00 53.21 O
ATOM 17 N3 U B1624 246.454 -8.670 239.146 1.00 53.29 N
ATOM 18 C4 U B1624 247.419 -8.459 238.178 1.00 53.34 C
ATOM 19 O4 U B1624 248.533 -8.886 238.417 1.00 53.46 O
ATOM 20 C5 U B1624 246.988 -7.782 236.972 1.00 53.27 C
ATOM 21 C6 U B1624 245.700 -7.408 236.866 1.00 53.17 C
ATOM 22 P A B1625 243.251 -2.554 237.904 1.00 50.18 P
ATOM 23 OP1 A B1625 242.874 -1.262 237.234 1.00 50.15 O
ATOM 24 OP2 A B1625 244.697 -2.852 238.165 1.00 50.24 O
ATOM 25 O5' A B1625 242.419 -2.715 239.237 1.00 50.25 O
TER
ATOM 2 P A A1625 243.251 -2.554 237.904 1.00 50.18 P
ATOM 3 OP1 A A1625 242.874 -1.262 237.234 1.00 50.15 O
ATOM 4 OP2 A A1625 244.697 -2.852 238.165 1.00 50.24 O
ATOM 5 O5' A A1625 242.419 -2.715 239.237 1.00 50.25 O
ATOM 6 C5' A A1625 242.251 -1.633 240.123 1.00 50.32 C
ATOM 7 C4' A A1625 240.885 -1.653 240.688 1.00 50.38 C
ATOM 8 O4' A A1625 239.957 -1.319 239.639 1.00 50.33 O
ATOM 9 C3' A A1625 240.441 -3.004 241.224 1.00 50.41 C
ATOM 10 O3' A A1625 239.610 -2.788 242.331 1.00 50.55 O
ATOM 11 C2' A A1625 239.621 -3.575 240.080 1.00 50.35 C
ATOM 12 O2' A A1625 238.660 -4.510 240.468 1.00 50.42 O
ATOM 13 C1' A A1625 238.986 -2.322 239.521 1.00 50.35 C
ATOM 14 N9 A A1625 238.643 -2.410 238.118 1.00 50.27 N
ATOM 15 C8 A A1625 239.500 -2.347 237.051 1.00 50.17 C
ATOM 16 N7 A A1625 238.869 -2.414 235.906 1.00 50.15 N
ATOM 17 C5 A A1625 237.522 -2.495 236.261 1.00 50.23 C
ATOM 18 C6 A A1625 236.340 -2.625 235.512 1.00 50.28 C
ATOM 19 N6 A A1625 236.241 -2.677 234.190 1.00 50.24 N
ATOM 20 N1 A A1625 235.221 -2.725 236.223 1.00 50.42 N
ATOM 21 C2 A A1625 235.260 -2.688 237.565 1.00 50.49 C
ATOM 22 N3 A A1625 236.272 -2.582 238.386 1.00 50.45 N
ATOM 23 C4 A A1625 237.376 -2.495 237.641 1.00 50.32 C
ATOM 24 P C A1626 240.277 -2.665 243.764 1.00 56.03 P
ATOM 25 OP1 C A1626 239.275 -2.021 244.670 1.00 56.20 O
ATOM 26 OP2 C A1626 241.587 -2.023 243.582 1.00 55.99 O
ATOM 27 O5' C A1626 240.498 -4.197 244.169 1.00 56.02 O
TER
ATOM 1 O3' G B1623 245.284 -6.341 232.357 1.00 54.09 O
ATOM 2 P U B1624 245.528 -5.117 233.376 1.00 53.08 P
ATOM 3 OP1 U B1624 244.876 -3.959 232.830 1.00 53.00 O
ATOM 4 OP2 U B1624 246.967 -5.039 233.651 1.00 53.18 O
ATOM 5 O5' U B1624 244.730 -5.569 234.652 1.00 53.04 O
ATOM 6 C5' U B1624 243.319 -5.668 234.589 1.00 52.99 C
ATOM 7 C4' U B1624 242.740 -5.879 235.940 1.00 53.00 C
ATOM 8 O4' U B1624 243.028 -7.224 236.394 1.00 53.05 O
ATOM 9 C3' U B1624 243.315 -4.987 236.999 1.00 53.02 C
ATOM 10 O3' U B1624 242.681 -3.734 237.006 1.00 52.99 O
ATOM 11 C2' U B1624 243.116 -5.797 238.269 1.00 53.07 C
ATOM 12 O2' U B1624 241.763 -5.725 238.682 1.00 53.07 O
ATOM 13 C1' U B1624 243.367 -7.212 237.758 1.00 53.08 C
ATOM 14 N1 U B1624 244.782 -7.627 237.889 1.00 53.14 N
ATOM 15 C2 U B1624 245.155 -8.282 239.049 1.00 53.20 C
ATOM 16 O2 U B1624 244.413 -8.495 239.957 1.00 53.21 O
ATOM 17 N3 U B1624 246.454 -8.670 239.146 1.00 53.29 N
ATOM 18 C4 U B1624 247.419 -8.459 238.178 1.00 53.34 C
ATOM 19 O4 U B1624 248.533 -8.886 238.417 1.00 53.46 O
ATOM 20 C5 U B1624 246.988 -7.782 236.972 1.00 53.27 C
ATOM 21 C6 U B1624 245.700 -7.408 236.866 1.00 53.17 C
ATOM 22 P A B1625 243.251 -2.554 237.904 1.00 50.18 P
ATOM 23 OP1 A B1625 242.874 -1.262 237.234 1.00 50.15 O
ATOM 24 OP2 A B1625 244.697 -2.852 238.165 1.00 50.24 O
ATOM 25 O5' A B1625 242.419 -2.715 239.237 1.00 50.25 O
TER
Atoms:
OP1: (242.874,-1.262,237.234)
OP2: (244.697,-2.852,238.165)
C3': (240.441,-3.004,241.224)
C1': (238.986,-2.322,239.521)
C5': (242.251,-1.633,240.123)
O4': (239.957,-1.319,239.639)
C8: (239.500,-2.347,237.051)
O2': (238.660,-4.510,240.468)
C6: (236.340,-2.625,235.512)
C5: (237.522,-2.495,236.261)
C4: (237.376,-2.495,237.641)
P: (243.251,-2.554,237.904)
C4': (240.885,-1.653,240.688)
C2': (239.621,-3.575,240.080)
C2: (235.260,-2.688,237.565)
N1: (235.221,-2.725,236.223)
N3: (236.272,-2.582,238.386)
N6: (236.241,-2.677,234.190)
N7: (238.869,-2.414,235.906)
N9: (238.643,-2.410,238.118)
O5': (242.419,-2.715,239.237)
O3': (239.610,-2.788,242.331)
OP2: (244.697,-2.852,238.165)
C3': (240.441,-3.004,241.224)
C1': (238.986,-2.322,239.521)
C5': (242.251,-1.633,240.123)
O4': (239.957,-1.319,239.639)
C8: (239.500,-2.347,237.051)
O2': (238.660,-4.510,240.468)
C6: (236.340,-2.625,235.512)
C5: (237.522,-2.495,236.261)
C4: (237.376,-2.495,237.641)
P: (243.251,-2.554,237.904)
C4': (240.885,-1.653,240.688)
C2': (239.621,-3.575,240.080)
C2: (235.260,-2.688,237.565)
N1: (235.221,-2.725,236.223)
N3: (236.272,-2.582,238.386)
N6: (236.241,-2.677,234.190)
N7: (238.869,-2.414,235.906)
N9: (238.643,-2.410,238.118)
O5': (242.419,-2.715,239.237)
O3': (239.610,-2.788,242.331)
C4: (247.419,-8.459,238.178)
N3: (246.454,-8.670,239.146)
OP1: (244.876,-3.959,232.830)
OP2: (246.967,-5.039,233.651)
C2: (245.155,-8.282,239.049)
C1': (243.367,-7.212,237.758)
C3': (243.315,-4.987,236.999)
O5': (244.730,-5.569,234.652)
O4': (243.028,-7.224,236.394)
C5': (243.319,-5.668,234.589)
P: (245.528,-5.117,233.376)
C4': (242.740,-5.879,235.940)
C2': (243.116,-5.797,238.269)
O2': (241.763,-5.725,238.682)
N1: (244.782,-7.627,237.889)
O4: (248.533,-8.886,238.417)
O2: (244.413,-8.495,239.957)
C6: (245.700,-7.408,236.866)
C5: (246.988,-7.782,236.972)
O3': (242.681,-3.734,237.006)
N3: (246.454,-8.670,239.146)
OP1: (244.876,-3.959,232.830)
OP2: (246.967,-5.039,233.651)
C2: (245.155,-8.282,239.049)
C1': (243.367,-7.212,237.758)
C3': (243.315,-4.987,236.999)
O5': (244.730,-5.569,234.652)
O4': (243.028,-7.224,236.394)
C5': (243.319,-5.668,234.589)
P: (245.528,-5.117,233.376)
C4': (242.740,-5.879,235.940)
C2': (243.116,-5.797,238.269)
O2': (241.763,-5.725,238.682)
N1: (244.782,-7.627,237.889)
O4: (248.533,-8.886,238.417)
O2: (244.413,-8.495,239.957)
C6: (245.700,-7.408,236.866)
C5: (246.988,-7.782,236.972)
O3': (242.681,-3.734,237.006)
Image (generated by PyMOL):