Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1682:A1681
Extra
PDB:
ATOM 1 O3' U A1681 -8.517 90.422 125.552 1.00 17.05 O
ATOM 2 P A A1682 -8.408 91.131 124.125 1.00 12.01 P
ATOM 3 OP1 A A1682 -7.831 90.150 123.204 1.00 12.01 O
ATOM 4 OP2 A A1682 -7.709 92.420 124.315 1.00 12.01 O
ATOM 5 O5' A A1682 -9.917 91.399 123.745 1.00 12.01 O
ATOM 6 C5' A A1682 -10.782 90.334 123.411 1.00 12.01 C
ATOM 7 C4' A A1682 -12.195 90.716 123.687 1.00 12.01 C
ATOM 8 O4' A A1682 -12.359 90.900 125.111 1.00 12.01 O
ATOM 9 C3' A A1682 -12.638 92.042 123.098 1.00 12.01 C
ATOM 10 O3' A A1682 -13.020 91.940 121.752 1.00 12.01 O
ATOM 11 C2' A A1682 -13.773 92.450 124.017 1.00 12.01 C
ATOM 12 O2' A A1682 -14.964 91.729 123.714 1.00 12.01 O
ATOM 13 C1' A A1682 -13.245 91.967 125.354 1.00 12.01 C
ATOM 14 N9 A A1682 -12.523 93.011 126.086 1.00 12.36 N
ATOM 15 C8 A A1682 -11.220 92.994 126.458 1.00 12.36 C
ATOM 16 N7 A A1682 -10.882 94.045 127.161 1.00 12.36 N
ATOM 17 C5 A A1682 -12.038 94.788 127.268 1.00 12.36 C
ATOM 18 C6 A A1682 -12.316 96.000 127.907 1.00 12.36 C
ATOM 19 N6 A A1682 -11.452 96.760 128.592 1.00 12.36 N
ATOM 20 N1 A A1682 -13.573 96.436 127.781 1.00 12.36 N
ATOM 21 C2 A A1682 -14.467 95.709 127.094 1.00 12.36 C
ATOM 22 N3 A A1682 -14.323 94.547 126.470 1.00 12.36 N
ATOM 23 C4 A A1682 -13.058 94.150 126.601 1.00 12.36 C
ATOM 24 P A A1683 -12.965 93.229 120.809 1.00 13.68 P
ATOM 25 OP1 A A1683 -12.913 92.742 119.406 1.00 13.68 O
ATOM 26 OP2 A A1683 -11.868 94.085 121.319 1.00 13.68 O
ATOM 27 O5' A A1683 -14.365 93.922 121.078 1.00 13.68 O
TER
ATOM 1 O3' G B1680 -3.896 86.036 126.109 1.00 14.98 O
ATOM 2 P U B1681 -4.081 87.170 124.981 1.00 17.05 P
ATOM 3 OP1 U B1681 -4.775 86.530 123.828 1.00 17.05 O
ATOM 4 OP2 U B1681 -2.760 87.795 124.764 1.00 17.05 O
ATOM 5 O5' U B1681 -5.051 88.213 125.680 1.00 17.05 O
ATOM 6 C5' U B1681 -6.450 87.998 125.710 1.00 17.05 C
ATOM 7 C4' U B1681 -7.102 88.857 126.750 1.00 17.05 C
ATOM 8 O4' U B1681 -6.229 88.983 127.900 1.00 17.05 O
ATOM 9 C3' U B1681 -7.371 90.290 126.355 1.00 17.05 C
ATOM 10 O3' U B1681 -8.517 90.422 125.552 1.00 17.05 O
ATOM 11 C2' U B1681 -7.502 90.971 127.706 1.00 17.05 C
ATOM 12 O2' U B1681 -8.773 90.696 128.279 1.00 17.05 O
ATOM 13 C1' U B1681 -6.441 90.234 128.518 1.00 17.05 C
ATOM 14 N1 U B1681 -5.158 90.967 128.573 1.00 17.68 N
ATOM 15 C2 U B1681 -5.078 92.024 129.454 1.00 17.68 C
ATOM 16 O2 U B1681 -6.011 92.375 130.146 1.00 17.68 O
ATOM 17 N3 U B1681 -3.881 92.668 129.497 1.00 17.68 N
ATOM 18 C4 U B1681 -2.763 92.348 128.770 1.00 17.68 C
ATOM 19 O4 U B1681 -1.739 93.025 128.904 1.00 17.68 O
ATOM 20 C5 U B1681 -2.912 91.229 127.897 1.00 17.68 C
ATOM 21 C6 U B1681 -4.079 90.591 127.834 1.00 17.68 C
ATOM 22 P A B1682 -8.408 91.131 124.125 1.00 12.01 P
ATOM 23 OP1 A B1682 -7.831 90.150 123.204 1.00 12.01 O
ATOM 24 OP2 A B1682 -7.709 92.420 124.315 1.00 12.01 O
ATOM 25 O5' A B1682 -9.917 91.399 123.745 1.00 12.01 O
TER
ATOM 2 P A A1682 -8.408 91.131 124.125 1.00 12.01 P
ATOM 3 OP1 A A1682 -7.831 90.150 123.204 1.00 12.01 O
ATOM 4 OP2 A A1682 -7.709 92.420 124.315 1.00 12.01 O
ATOM 5 O5' A A1682 -9.917 91.399 123.745 1.00 12.01 O
ATOM 6 C5' A A1682 -10.782 90.334 123.411 1.00 12.01 C
ATOM 7 C4' A A1682 -12.195 90.716 123.687 1.00 12.01 C
ATOM 8 O4' A A1682 -12.359 90.900 125.111 1.00 12.01 O
ATOM 9 C3' A A1682 -12.638 92.042 123.098 1.00 12.01 C
ATOM 10 O3' A A1682 -13.020 91.940 121.752 1.00 12.01 O
ATOM 11 C2' A A1682 -13.773 92.450 124.017 1.00 12.01 C
ATOM 12 O2' A A1682 -14.964 91.729 123.714 1.00 12.01 O
ATOM 13 C1' A A1682 -13.245 91.967 125.354 1.00 12.01 C
ATOM 14 N9 A A1682 -12.523 93.011 126.086 1.00 12.36 N
ATOM 15 C8 A A1682 -11.220 92.994 126.458 1.00 12.36 C
ATOM 16 N7 A A1682 -10.882 94.045 127.161 1.00 12.36 N
ATOM 17 C5 A A1682 -12.038 94.788 127.268 1.00 12.36 C
ATOM 18 C6 A A1682 -12.316 96.000 127.907 1.00 12.36 C
ATOM 19 N6 A A1682 -11.452 96.760 128.592 1.00 12.36 N
ATOM 20 N1 A A1682 -13.573 96.436 127.781 1.00 12.36 N
ATOM 21 C2 A A1682 -14.467 95.709 127.094 1.00 12.36 C
ATOM 22 N3 A A1682 -14.323 94.547 126.470 1.00 12.36 N
ATOM 23 C4 A A1682 -13.058 94.150 126.601 1.00 12.36 C
ATOM 24 P A A1683 -12.965 93.229 120.809 1.00 13.68 P
ATOM 25 OP1 A A1683 -12.913 92.742 119.406 1.00 13.68 O
ATOM 26 OP2 A A1683 -11.868 94.085 121.319 1.00 13.68 O
ATOM 27 O5' A A1683 -14.365 93.922 121.078 1.00 13.68 O
TER
ATOM 1 O3' G B1680 -3.896 86.036 126.109 1.00 14.98 O
ATOM 2 P U B1681 -4.081 87.170 124.981 1.00 17.05 P
ATOM 3 OP1 U B1681 -4.775 86.530 123.828 1.00 17.05 O
ATOM 4 OP2 U B1681 -2.760 87.795 124.764 1.00 17.05 O
ATOM 5 O5' U B1681 -5.051 88.213 125.680 1.00 17.05 O
ATOM 6 C5' U B1681 -6.450 87.998 125.710 1.00 17.05 C
ATOM 7 C4' U B1681 -7.102 88.857 126.750 1.00 17.05 C
ATOM 8 O4' U B1681 -6.229 88.983 127.900 1.00 17.05 O
ATOM 9 C3' U B1681 -7.371 90.290 126.355 1.00 17.05 C
ATOM 10 O3' U B1681 -8.517 90.422 125.552 1.00 17.05 O
ATOM 11 C2' U B1681 -7.502 90.971 127.706 1.00 17.05 C
ATOM 12 O2' U B1681 -8.773 90.696 128.279 1.00 17.05 O
ATOM 13 C1' U B1681 -6.441 90.234 128.518 1.00 17.05 C
ATOM 14 N1 U B1681 -5.158 90.967 128.573 1.00 17.68 N
ATOM 15 C2 U B1681 -5.078 92.024 129.454 1.00 17.68 C
ATOM 16 O2 U B1681 -6.011 92.375 130.146 1.00 17.68 O
ATOM 17 N3 U B1681 -3.881 92.668 129.497 1.00 17.68 N
ATOM 18 C4 U B1681 -2.763 92.348 128.770 1.00 17.68 C
ATOM 19 O4 U B1681 -1.739 93.025 128.904 1.00 17.68 O
ATOM 20 C5 U B1681 -2.912 91.229 127.897 1.00 17.68 C
ATOM 21 C6 U B1681 -4.079 90.591 127.834 1.00 17.68 C
ATOM 22 P A B1682 -8.408 91.131 124.125 1.00 12.01 P
ATOM 23 OP1 A B1682 -7.831 90.150 123.204 1.00 12.01 O
ATOM 24 OP2 A B1682 -7.709 92.420 124.315 1.00 12.01 O
ATOM 25 O5' A B1682 -9.917 91.399 123.745 1.00 12.01 O
TER
Atoms:
OP1: (-7.831,90.150,123.204)
OP2: (-7.709,92.420,124.315)
C3': (-12.638,92.042,123.098)
C1': (-13.245,91.967,125.354)
C5': (-10.782,90.334,123.411)
O4': (-12.359,90.900,125.111)
C8: (-11.220,92.994,126.458)
O2': (-14.964,91.729,123.714)
C6: (-12.316,96.000,127.907)
C5: (-12.038,94.788,127.268)
C4: (-13.058,94.150,126.601)
P: (-8.408,91.131,124.125)
C4': (-12.195,90.716,123.687)
C2': (-13.773,92.450,124.017)
C2: (-14.467,95.709,127.094)
N1: (-13.573,96.436,127.781)
N3: (-14.323,94.547,126.470)
N6: (-11.452,96.760,128.592)
N7: (-10.882,94.045,127.161)
N9: (-12.523,93.011,126.086)
O5': (-9.917,91.399,123.745)
O3': (-13.020,91.940,121.752)
OP2: (-7.709,92.420,124.315)
C3': (-12.638,92.042,123.098)
C1': (-13.245,91.967,125.354)
C5': (-10.782,90.334,123.411)
O4': (-12.359,90.900,125.111)
C8: (-11.220,92.994,126.458)
O2': (-14.964,91.729,123.714)
C6: (-12.316,96.000,127.907)
C5: (-12.038,94.788,127.268)
C4: (-13.058,94.150,126.601)
P: (-8.408,91.131,124.125)
C4': (-12.195,90.716,123.687)
C2': (-13.773,92.450,124.017)
C2: (-14.467,95.709,127.094)
N1: (-13.573,96.436,127.781)
N3: (-14.323,94.547,126.470)
N6: (-11.452,96.760,128.592)
N7: (-10.882,94.045,127.161)
N9: (-12.523,93.011,126.086)
O5': (-9.917,91.399,123.745)
O3': (-13.020,91.940,121.752)
C4: (-2.763,92.348,128.770)
N3: (-3.881,92.668,129.497)
OP1: (-4.775,86.530,123.828)
OP2: (-2.760,87.795,124.764)
C2: (-5.078,92.024,129.454)
C1': (-6.441,90.234,128.518)
C3': (-7.371,90.290,126.355)
O5': (-5.051,88.213,125.680)
O4': (-6.229,88.983,127.900)
C5': (-6.450,87.998,125.710)
P: (-4.081,87.170,124.981)
C4': (-7.102,88.857,126.750)
C2': (-7.502,90.971,127.706)
O2': (-8.773,90.696,128.279)
N1: (-5.158,90.967,128.573)
O4: (-1.739,93.025,128.904)
O2: (-6.011,92.375,130.146)
C6: (-4.079,90.591,127.834)
C5: (-2.912,91.229,127.897)
O3': (-8.517,90.422,125.552)
N3: (-3.881,92.668,129.497)
OP1: (-4.775,86.530,123.828)
OP2: (-2.760,87.795,124.764)
C2: (-5.078,92.024,129.454)
C1': (-6.441,90.234,128.518)
C3': (-7.371,90.290,126.355)
O5': (-5.051,88.213,125.680)
O4': (-6.229,88.983,127.900)
C5': (-6.450,87.998,125.710)
P: (-4.081,87.170,124.981)
C4': (-7.102,88.857,126.750)
C2': (-7.502,90.971,127.706)
O2': (-8.773,90.696,128.279)
N1: (-5.158,90.967,128.573)
O4: (-1.739,93.025,128.904)
O2: (-6.011,92.375,130.146)
C6: (-4.079,90.591,127.834)
C5: (-2.912,91.229,127.897)
O3': (-8.517,90.422,125.552)
Image (generated by PyMOL):