ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A364:A363

Extra

PDB:
ATOM 1 O3' U A 363 -76.171 2.520 -69.923 1.00 11.84 O
ATOM 2 P A A 364 -76.531 1.023 -70.290 1.00 13.69 P
ATOM 3 OP1 A A 364 -77.474 0.542 -69.229 1.00 13.69 O
ATOM 4 OP2 A A 364 -75.231 0.301 -70.495 1.00 13.69 O
ATOM 5 O5' A A 364 -77.300 1.167 -71.684 1.00 13.69 O
ATOM 6 C5' A A 364 -78.428 2.035 -71.831 1.00 13.69 C
ATOM 7 C4' A A 364 -78.522 2.575 -73.239 1.00 13.69 C
ATOM 8 O4' A A 364 -77.753 3.811 -73.328 1.00 13.69 O
ATOM 9 C3' A A 364 -77.947 1.649 -74.301 1.00 13.69 C
ATOM 10 O3' A A 364 -78.639 1.832 -75.533 1.00 13.69 O
ATOM 11 C2' A A 364 -76.509 2.140 -74.420 1.00 13.69 C
ATOM 12 O2' A A 364 -75.855 1.812 -75.625 1.00 13.69 O
ATOM 13 C1' A A 364 -76.689 3.646 -74.255 1.00 13.69 C
ATOM 14 N9 A A 364 -75.501 4.318 -73.726 1.00 13.85 N
ATOM 15 C8 A A 364 -75.142 4.485 -72.414 1.00 13.85 C
ATOM 16 N7 A A 364 -73.996 5.101 -72.270 1.00 13.85 N
ATOM 17 C5 A A 364 -73.576 5.347 -73.566 1.00 13.85 C
ATOM 18 C6 A A 364 -72.426 5.969 -74.077 1.00 13.85 C
ATOM 19 N6 A A 364 -71.465 6.469 -73.300 1.00 13.85 N
ATOM 20 N1 A A 364 -72.290 6.071 -75.420 1.00 13.85 N
ATOM 21 C2 A A 364 -73.270 5.543 -76.179 1.00 13.85 C
ATOM 22 N3 A A 364 -74.397 4.923 -75.803 1.00 13.85 N
ATOM 23 C4 A A 364 -74.491 4.866 -74.469 1.00 13.85 C
ATOM 24 P U A 365 -79.284 0.559 -76.293 1.00 27.81 P
ATOM 25 OP1 U A 365 -80.595 1.002 -76.845 1.00 27.81 O
ATOM 26 OP2 U A 365 -79.266 -0.586 -75.340 1.00 27.81 O
ATOM 27 O5' U A 365 -78.252 0.292 -77.491 1.00 27.81 O
TER

ATOM 1 O3' A B 362 -80.021 3.313 -65.423 1.00 20.04 O
ATOM 2 P U B 363 -80.034 1.950 -66.272 1.00 11.84 P
ATOM 3 OP1 U B 363 -81.322 1.929 -67.031 1.00 11.84 O
ATOM 4 OP2 U B 363 -79.729 0.826 -65.320 1.00 11.84 O
ATOM 5 O5' U B 363 -78.817 2.157 -67.285 1.00 11.84 O
ATOM 6 C5' U B 363 -78.842 3.207 -68.234 1.00 11.84 C
ATOM 7 C4' U B 363 -77.488 3.865 -68.390 1.00 11.84 C
ATOM 8 O4' U B 363 -77.137 4.617 -67.208 1.00 11.84 O
ATOM 9 C3' U B 363 -76.299 2.936 -68.595 1.00 11.84 C
ATOM 10 O3' U B 363 -76.171 2.520 -69.923 1.00 11.84 O
ATOM 11 C2' U B 363 -75.099 3.749 -68.118 1.00 11.84 C
ATOM 12 O2' U B 363 -74.424 4.355 -69.216 1.00 11.84 O
ATOM 13 C1' U B 363 -75.743 4.834 -67.235 1.00 11.84 C
ATOM 14 N1 U B 363 -75.192 4.852 -65.863 1.00 13.55 N
ATOM 15 C2 U B 363 -74.808 6.132 -65.511 1.00 13.55 C
ATOM 16 O2 U B 363 -74.977 7.080 -66.266 1.00 13.55 O
ATOM 17 N3 U B 363 -74.247 6.281 -64.277 1.00 13.55 N
ATOM 18 C4 U B 363 -74.025 5.270 -63.395 1.00 13.55 C
ATOM 19 O4 U B 363 -73.508 5.608 -62.337 1.00 13.55 O
ATOM 20 C5 U B 363 -74.425 3.950 -63.825 1.00 13.55 C
ATOM 21 C6 U B 363 -74.972 3.778 -65.034 1.00 13.55 C
ATOM 22 P A B 364 -76.531 1.023 -70.290 1.00 13.69 P
ATOM 23 OP1 A B 364 -77.474 0.542 -69.229 1.00 13.69 O
ATOM 24 OP2 A B 364 -75.231 0.301 -70.495 1.00 13.69 O
ATOM 25 O5' A B 364 -77.300 1.167 -71.684 1.00 13.69 O
TER

Atoms:
OP1: (-77.474,0.542,-69.229)
OP2: (-75.231,0.301,-70.495)
C3': (-77.947,1.649,-74.301)
C1': (-76.689,3.646,-74.255)
C5': (-78.428,2.035,-71.831)
O4': (-77.753,3.811,-73.328)
C8: (-75.142,4.485,-72.414)
O2': (-75.855,1.812,-75.625)
C6: (-72.426,5.969,-74.077)
C5: (-73.576,5.347,-73.566)
C4: (-74.491,4.866,-74.469)
P: (-76.531,1.023,-70.290)
C4': (-78.522,2.575,-73.239)
C2': (-76.509,2.140,-74.420)
C2: (-73.270,5.543,-76.179)
N1: (-72.290,6.071,-75.420)
N3: (-74.397,4.923,-75.803)
N6: (-71.465,6.469,-73.300)
N7: (-73.996,5.101,-72.270)
N9: (-75.501,4.318,-73.726)
O5': (-77.300,1.167,-71.684)
O3': (-78.639,1.832,-75.533)
C4: (-74.025,5.270,-63.395)
N3: (-74.247,6.281,-64.277)
OP1: (-81.322,1.929,-67.031)
OP2: (-79.729,0.826,-65.320)
C2: (-74.808,6.132,-65.511)
C1': (-75.743,4.834,-67.235)
C3': (-76.299,2.936,-68.595)
O5': (-78.817,2.157,-67.285)
O4': (-77.137,4.617,-67.208)
C5': (-78.842,3.207,-68.234)
P: (-80.034,1.950,-66.272)
C4': (-77.488,3.865,-68.390)
C2': (-75.099,3.749,-68.118)
O2': (-74.424,4.355,-69.216)
N1: (-75.192,4.852,-65.863)
O4: (-73.508,5.608,-62.337)
O2: (-74.977,7.080,-66.266)
C6: (-74.972,3.778,-65.034)
C5: (-74.425,3.950,-63.825)
O3': (-76.171,2.520,-69.923)
Image (generated by PyMOL):
PyMOL image
show in jmol