Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02631:02630
Extra
PDB:
ATOM 1 O3' U A2630 43.218 106.862 153.023 1.00 46.07 O
ATOM 2 P A A2631 43.100 105.614 152.007 1.00 47.56 P
ATOM 3 OP1 A A2631 44.281 104.724 152.164 1.00 45.10 O
ATOM 4 OP2 A A2631 42.772 106.171 150.672 1.00 48.06 O
ATOM 5 O5' A A2631 41.794 104.846 152.503 1.00 46.15 O
ATOM 6 C5' A A2631 40.625 105.588 152.871 1.00 46.31 C
ATOM 7 C4' A A2631 39.382 104.749 152.721 1.00 47.16 C
ATOM 8 O4' A A2631 39.411 103.626 153.648 1.00 50.03 O
ATOM 9 C3' A A2631 38.138 105.521 153.111 1.00 47.48 C
ATOM 10 O3' A A2631 37.682 106.358 152.066 1.00 44.20 O
ATOM 11 C2' A A2631 37.187 104.427 153.566 1.00 48.92 C
ATOM 12 O2' A A2631 36.579 103.710 152.514 1.00 50.06 O
ATOM 13 C1' A A2631 38.159 103.522 154.323 1.00 50.54 C
ATOM 14 N9 A A2631 38.344 103.968 155.712 1.00 51.80 N
ATOM 15 C8 A A2631 39.519 104.296 156.350 1.00 51.06 C
ATOM 16 N7 A A2631 39.359 104.661 157.600 1.00 50.83 N
ATOM 17 C5 A A2631 37.990 104.567 157.802 1.00 51.12 C
ATOM 18 C6 A A2631 37.183 104.811 158.924 1.00 51.54 C
ATOM 19 N6 A A2631 37.657 105.215 160.103 1.00 52.67 N
ATOM 20 N1 A A2631 35.854 104.620 158.795 1.00 51.11 N
ATOM 21 C2 A A2631 35.379 104.210 157.616 1.00 50.92 C
ATOM 22 N3 A A2631 36.034 103.945 156.491 1.00 51.10 N
ATOM 23 C4 A A2631 37.352 104.145 156.651 1.00 50.75 C
ATOM 24 P A A2632 37.602 107.938 152.315 1.00 44.75 P
ATOM 25 OP1 A A2632 37.246 108.593 151.033 1.00 44.25 O
ATOM 26 OP2 A A2632 38.836 108.352 153.031 1.00 40.66 O
ATOM 27 O5' A A2632 36.351 108.080 153.294 1.00 46.70 O
TER
ATOM 1 O3' C B2629 45.202 106.862 159.266 1.00 45.24 O
ATOM 2 P U B2630 45.425 105.517 158.418 1.00 46.88 P
ATOM 3 OP1 U B2630 44.521 104.483 158.988 1.00 45.42 O
ATOM 4 OP2 U B2630 46.880 105.230 158.308 1.00 45.09 O
ATOM 5 O5' U B2630 44.866 105.911 156.976 1.00 46.10 O
ATOM 6 C5' U B2630 44.569 104.909 155.978 1.00 43.85 C
ATOM 7 C4' U B2630 43.537 105.443 155.007 1.00 45.22 C
ATOM 8 O4' U B2630 42.334 105.765 155.750 1.00 45.54 O
ATOM 9 C3' U B2630 43.922 106.727 154.269 1.00 45.35 C
ATOM 10 O3' U B2630 43.218 106.862 153.023 1.00 46.07 O
ATOM 11 C2' U B2630 43.378 107.794 155.207 1.00 45.30 C
ATOM 12 O2' U B2630 43.154 109.026 154.563 1.00 44.55 O
ATOM 13 C1' U B2630 42.064 107.145 155.641 1.00 46.05 C
ATOM 14 N1 U B2630 41.501 107.596 156.923 1.00 48.28 N
ATOM 15 C2 U B2630 40.120 107.714 157.008 1.00 48.36 C
ATOM 16 O2 U B2630 39.370 107.475 156.076 1.00 47.56 O
ATOM 17 N3 U B2630 39.650 108.124 158.229 1.00 49.94 N
ATOM 18 C4 U B2630 40.395 108.426 159.348 1.00 51.32 C
ATOM 19 O4 U B2630 39.820 108.796 160.372 1.00 53.49 O
ATOM 20 C5 U B2630 41.812 108.283 159.184 1.00 50.93 C
ATOM 21 C6 U B2630 42.305 107.883 158.008 1.00 49.16 C
ATOM 22 P A B2631 43.100 105.614 152.007 1.00 47.56 P
ATOM 23 OP1 A B2631 44.281 104.724 152.164 1.00 45.10 O
ATOM 24 OP2 A B2631 42.772 106.171 150.672 1.00 48.06 O
ATOM 25 O5' A B2631 41.794 104.846 152.503 1.00 46.15 O
TER
ATOM 2 P A A2631 43.100 105.614 152.007 1.00 47.56 P
ATOM 3 OP1 A A2631 44.281 104.724 152.164 1.00 45.10 O
ATOM 4 OP2 A A2631 42.772 106.171 150.672 1.00 48.06 O
ATOM 5 O5' A A2631 41.794 104.846 152.503 1.00 46.15 O
ATOM 6 C5' A A2631 40.625 105.588 152.871 1.00 46.31 C
ATOM 7 C4' A A2631 39.382 104.749 152.721 1.00 47.16 C
ATOM 8 O4' A A2631 39.411 103.626 153.648 1.00 50.03 O
ATOM 9 C3' A A2631 38.138 105.521 153.111 1.00 47.48 C
ATOM 10 O3' A A2631 37.682 106.358 152.066 1.00 44.20 O
ATOM 11 C2' A A2631 37.187 104.427 153.566 1.00 48.92 C
ATOM 12 O2' A A2631 36.579 103.710 152.514 1.00 50.06 O
ATOM 13 C1' A A2631 38.159 103.522 154.323 1.00 50.54 C
ATOM 14 N9 A A2631 38.344 103.968 155.712 1.00 51.80 N
ATOM 15 C8 A A2631 39.519 104.296 156.350 1.00 51.06 C
ATOM 16 N7 A A2631 39.359 104.661 157.600 1.00 50.83 N
ATOM 17 C5 A A2631 37.990 104.567 157.802 1.00 51.12 C
ATOM 18 C6 A A2631 37.183 104.811 158.924 1.00 51.54 C
ATOM 19 N6 A A2631 37.657 105.215 160.103 1.00 52.67 N
ATOM 20 N1 A A2631 35.854 104.620 158.795 1.00 51.11 N
ATOM 21 C2 A A2631 35.379 104.210 157.616 1.00 50.92 C
ATOM 22 N3 A A2631 36.034 103.945 156.491 1.00 51.10 N
ATOM 23 C4 A A2631 37.352 104.145 156.651 1.00 50.75 C
ATOM 24 P A A2632 37.602 107.938 152.315 1.00 44.75 P
ATOM 25 OP1 A A2632 37.246 108.593 151.033 1.00 44.25 O
ATOM 26 OP2 A A2632 38.836 108.352 153.031 1.00 40.66 O
ATOM 27 O5' A A2632 36.351 108.080 153.294 1.00 46.70 O
TER
ATOM 1 O3' C B2629 45.202 106.862 159.266 1.00 45.24 O
ATOM 2 P U B2630 45.425 105.517 158.418 1.00 46.88 P
ATOM 3 OP1 U B2630 44.521 104.483 158.988 1.00 45.42 O
ATOM 4 OP2 U B2630 46.880 105.230 158.308 1.00 45.09 O
ATOM 5 O5' U B2630 44.866 105.911 156.976 1.00 46.10 O
ATOM 6 C5' U B2630 44.569 104.909 155.978 1.00 43.85 C
ATOM 7 C4' U B2630 43.537 105.443 155.007 1.00 45.22 C
ATOM 8 O4' U B2630 42.334 105.765 155.750 1.00 45.54 O
ATOM 9 C3' U B2630 43.922 106.727 154.269 1.00 45.35 C
ATOM 10 O3' U B2630 43.218 106.862 153.023 1.00 46.07 O
ATOM 11 C2' U B2630 43.378 107.794 155.207 1.00 45.30 C
ATOM 12 O2' U B2630 43.154 109.026 154.563 1.00 44.55 O
ATOM 13 C1' U B2630 42.064 107.145 155.641 1.00 46.05 C
ATOM 14 N1 U B2630 41.501 107.596 156.923 1.00 48.28 N
ATOM 15 C2 U B2630 40.120 107.714 157.008 1.00 48.36 C
ATOM 16 O2 U B2630 39.370 107.475 156.076 1.00 47.56 O
ATOM 17 N3 U B2630 39.650 108.124 158.229 1.00 49.94 N
ATOM 18 C4 U B2630 40.395 108.426 159.348 1.00 51.32 C
ATOM 19 O4 U B2630 39.820 108.796 160.372 1.00 53.49 O
ATOM 20 C5 U B2630 41.812 108.283 159.184 1.00 50.93 C
ATOM 21 C6 U B2630 42.305 107.883 158.008 1.00 49.16 C
ATOM 22 P A B2631 43.100 105.614 152.007 1.00 47.56 P
ATOM 23 OP1 A B2631 44.281 104.724 152.164 1.00 45.10 O
ATOM 24 OP2 A B2631 42.772 106.171 150.672 1.00 48.06 O
ATOM 25 O5' A B2631 41.794 104.846 152.503 1.00 46.15 O
TER
Atoms:
OP1: (44.281,104.724,152.164)
OP2: (42.772,106.171,150.672)
C3': (38.138,105.521,153.111)
C1': (38.159,103.522,154.323)
C5': (40.625,105.588,152.871)
O4': (39.411,103.626,153.648)
C8: (39.519,104.296,156.350)
O2': (36.579,103.710,152.514)
C6: (37.183,104.811,158.924)
C5: (37.990,104.567,157.802)
C4: (37.352,104.145,156.651)
P: (43.100,105.614,152.007)
C4': (39.382,104.749,152.721)
C2': (37.187,104.427,153.566)
C2: (35.379,104.210,157.616)
N1: (35.854,104.620,158.795)
N3: (36.034,103.945,156.491)
N6: (37.657,105.215,160.103)
N7: (39.359,104.661,157.600)
N9: (38.344,103.968,155.712)
O5': (41.794,104.846,152.503)
O3': (37.682,106.358,152.066)
OP2: (42.772,106.171,150.672)
C3': (38.138,105.521,153.111)
C1': (38.159,103.522,154.323)
C5': (40.625,105.588,152.871)
O4': (39.411,103.626,153.648)
C8: (39.519,104.296,156.350)
O2': (36.579,103.710,152.514)
C6: (37.183,104.811,158.924)
C5: (37.990,104.567,157.802)
C4: (37.352,104.145,156.651)
P: (43.100,105.614,152.007)
C4': (39.382,104.749,152.721)
C2': (37.187,104.427,153.566)
C2: (35.379,104.210,157.616)
N1: (35.854,104.620,158.795)
N3: (36.034,103.945,156.491)
N6: (37.657,105.215,160.103)
N7: (39.359,104.661,157.600)
N9: (38.344,103.968,155.712)
O5': (41.794,104.846,152.503)
O3': (37.682,106.358,152.066)
C4: (40.395,108.426,159.348)
N3: (39.650,108.124,158.229)
OP1: (44.521,104.483,158.988)
OP2: (46.880,105.230,158.308)
C2: (40.120,107.714,157.008)
C1': (42.064,107.145,155.641)
C3': (43.922,106.727,154.269)
O5': (44.866,105.911,156.976)
O4': (42.334,105.765,155.750)
C5': (44.569,104.909,155.978)
P: (45.425,105.517,158.418)
C4': (43.537,105.443,155.007)
C2': (43.378,107.794,155.207)
O2': (43.154,109.026,154.563)
N1: (41.501,107.596,156.923)
O4: (39.820,108.796,160.372)
O2: (39.370,107.475,156.076)
C6: (42.305,107.883,158.008)
C5: (41.812,108.283,159.184)
O3': (43.218,106.862,153.023)
N3: (39.650,108.124,158.229)
OP1: (44.521,104.483,158.988)
OP2: (46.880,105.230,158.308)
C2: (40.120,107.714,157.008)
C1': (42.064,107.145,155.641)
C3': (43.922,106.727,154.269)
O5': (44.866,105.911,156.976)
O4': (42.334,105.765,155.750)
C5': (44.569,104.909,155.978)
P: (45.425,105.517,158.418)
C4': (43.537,105.443,155.007)
C2': (43.378,107.794,155.207)
O2': (43.154,109.026,154.563)
N1: (41.501,107.596,156.923)
O4: (39.820,108.796,160.372)
O2: (39.370,107.475,156.076)
C6: (42.305,107.883,158.008)
C5: (41.812,108.283,159.184)
O3': (43.218,106.862,153.023)
Image (generated by PyMOL):