ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:01300:01272

Extra

PDB:
ATOM 1 O3' G A1299 17.572 140.592 54.865 1.00 41.00 O
ATOM 2 P A A1300 18.367 140.925 53.506 1.00 41.45 P
ATOM 3 OP1 A A1300 19.591 141.717 53.810 1.00 44.22 O
ATOM 4 OP2 A A1300 17.384 141.448 52.522 1.00 42.55 O
ATOM 5 O5' A A1300 18.838 139.487 53.026 1.00 40.34 O
ATOM 6 C5' A A1300 19.673 138.683 53.869 1.00 40.56 C
ATOM 7 C4' A A1300 19.349 137.224 53.680 1.00 41.82 C
ATOM 8 O4' A A1300 18.129 136.873 54.396 1.00 42.15 O
ATOM 9 C3' A A1300 19.134 136.791 52.239 1.00 40.52 C
ATOM 10 O3' A A1300 19.629 135.479 52.104 1.00 42.52 O
ATOM 11 C2' A A1300 17.613 136.788 52.114 1.00 40.96 C
ATOM 12 O2' A A1300 17.161 135.914 51.098 1.00 41.10 O
ATOM 13 C1' A A1300 17.206 136.283 53.499 1.00 40.23 C
ATOM 14 N9 A A1300 15.849 136.617 53.950 1.00 37.72 N
ATOM 15 C8 A A1300 15.379 137.818 54.427 1.00 37.28 C
ATOM 16 N7 A A1300 14.124 137.781 54.811 1.00 36.13 N
ATOM 17 C5 A A1300 13.738 136.471 54.561 1.00 35.39 C
ATOM 18 C6 A A1300 12.520 135.788 54.754 1.00 35.91 C
ATOM 19 N6 A A1300 11.426 136.342 55.298 1.00 36.25 N
ATOM 20 N1 A A1300 12.461 134.494 54.373 1.00 36.06 N
ATOM 21 C2 A A1300 13.556 133.933 53.847 1.00 36.98 C
ATOM 22 N3 A A1300 14.759 134.466 53.629 1.00 36.81 N
ATOM 23 C4 A A1300 14.783 135.751 54.012 1.00 35.39 C
ATOM 24 P C A1301 20.550 135.112 50.850 1.00 42.93 P
ATOM 25 OP1 C A1301 21.906 135.627 51.127 1.00 45.08 O
ATOM 26 OP2 C A1301 19.821 135.577 49.648 1.00 47.69 O
ATOM 27 O5' C A1301 20.550 133.522 50.838 1.00 43.07 O
TER

ATOM 1 O3' G B1271 5.750 127.193 54.203 1.00 36.48 O
ATOM 2 P A B1272 5.433 128.626 53.547 1.00 38.04 P
ATOM 3 OP1 A B1272 4.428 129.328 54.404 1.00 34.60 O
ATOM 4 OP2 A B1272 5.145 128.415 52.100 1.00 36.95 O
ATOM 5 O5' A B1272 6.820 129.404 53.670 1.00 37.03 O
ATOM 6 C5' A B1272 7.257 129.921 54.942 1.00 39.42 C
ATOM 7 C4' A B1272 8.275 131.023 54.750 1.00 39.38 C
ATOM 8 O4' A B1272 9.538 130.484 54.279 1.00 40.19 O
ATOM 9 C3' A B1272 7.930 132.091 53.731 1.00 38.59 C
ATOM 10 O3' A B1272 7.045 133.049 54.291 1.00 39.28 O
ATOM 11 C2' A B1272 9.299 132.688 53.447 1.00 38.89 C
ATOM 12 O2' A B1272 9.724 133.527 54.504 1.00 40.74 O
ATOM 13 C1' A B1272 10.179 131.436 53.450 1.00 38.30 C
ATOM 14 N9 A B1272 10.354 130.840 52.126 1.00 38.63 N
ATOM 15 C8 A B1272 9.602 129.848 51.543 1.00 37.63 C
ATOM 16 N7 A B1272 10.024 129.492 50.354 1.00 37.12 N
ATOM 17 C5 A B1272 11.126 130.304 50.135 1.00 37.14 C
ATOM 18 C6 A B1272 12.022 130.403 49.061 1.00 37.65 C
ATOM 19 N6 A B1272 11.954 129.634 47.971 1.00 35.89 N
ATOM 20 N1 A B1272 13.006 131.328 49.144 1.00 38.83 N
ATOM 21 C2 A B1272 13.074 132.094 50.245 1.00 39.10 C
ATOM 22 N3 A B1272 12.295 132.088 51.325 1.00 38.33 N
ATOM 23 C4 A B1272 11.331 131.154 51.208 1.00 38.21 C
ATOM 24 P U B1273 6.046 133.874 53.339 1.00 39.01 P
ATOM 25 OP1 U B1273 4.655 133.566 53.754 1.00 39.16 O
ATOM 26 OP2 U B1273 6.450 133.702 51.916 1.00 40.36 O
ATOM 27 O5' U B1273 6.350 135.380 53.725 1.00 38.46 O
TER

Atoms:
OP1: (19.591,141.717,53.810)
OP2: (17.384,141.448,52.522)
C3': (19.134,136.791,52.239)
C1': (17.206,136.283,53.499)
C5': (19.673,138.683,53.869)
O4': (18.129,136.873,54.396)
C8: (15.379,137.818,54.427)
O2': (17.161,135.914,51.098)
C6: (12.520,135.788,54.754)
C5: (13.738,136.471,54.561)
C4: (14.783,135.751,54.012)
P: (18.367,140.925,53.506)
C4': (19.349,137.224,53.680)
C2': (17.613,136.788,52.114)
C2: (13.556,133.933,53.847)
N1: (12.461,134.494,54.373)
N3: (14.759,134.466,53.629)
N6: (11.426,136.342,55.298)
N7: (14.124,137.781,54.811)
N9: (15.849,136.617,53.950)
O5': (18.838,139.487,53.026)
O3': (19.629,135.479,52.104)
OP1: (4.428,129.328,54.404)
OP2: (5.145,128.415,52.100)
C3': (7.930,132.091,53.731)
C1': (10.179,131.436,53.450)
C5': (7.257,129.921,54.942)
O4': (9.538,130.484,54.279)
C8: (9.602,129.848,51.543)
O2': (9.724,133.527,54.504)
C6: (12.022,130.403,49.061)
C5: (11.126,130.304,50.135)
C4: (11.331,131.154,51.208)
P: (5.433,128.626,53.547)
C4': (8.275,131.023,54.750)
C2': (9.299,132.688,53.447)
C2: (13.074,132.094,50.245)
N1: (13.006,131.328,49.144)
N3: (12.295,132.088,51.325)
N6: (11.954,129.634,47.971)
N7: (10.024,129.492,50.354)
N9: (10.354,130.840,52.126)
O5': (6.820,129.404,53.670)
O3': (7.045,133.049,54.291)
Image (generated by PyMOL):
PyMOL image
show in jmol