ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3B5A:C12:C11

Extra

PDB:
ATOM 1 O3' U A 11 28.375 26.871 46.169 1.00 65.18 O
ATOM 2 P A A 12 27.377 28.048 45.902 1.00 64.92 P
ATOM 3 OP1 A A 12 27.490 29.021 47.020 1.00 65.60 O
ATOM 4 OP2 A A 12 26.041 27.457 45.570 1.00 61.90 O
ATOM 5 O5' A A 12 28.115 28.653 44.625 1.00 63.70 O
ATOM 6 C5' A A 12 29.426 29.232 44.742 1.00 63.39 C
ATOM 7 C4' A A 12 30.268 28.916 43.523 1.00 66.00 C
ATOM 8 O4' A A 12 30.542 27.500 43.479 1.00 69.19 O
ATOM 9 C3' A A 12 29.658 29.222 42.172 1.00 68.67 C
ATOM 10 O3' A A 12 29.925 30.569 41.831 1.00 73.94 O
ATOM 11 C2' A A 12 30.413 28.269 41.254 1.00 65.48 C
ATOM 12 O2' A A 12 31.719 28.722 40.986 1.00 63.99 O
ATOM 13 C1' A A 12 30.535 27.039 42.140 1.00 65.47 C
ATOM 14 N9 A A 12 29.434 26.086 42.005 1.00 64.31 N
ATOM 15 C8 A A 12 28.677 25.583 43.026 1.00 64.17 C
ATOM 16 N7 A A 12 27.772 24.715 42.645 1.00 62.82 N
ATOM 17 C5 A A 12 27.939 24.645 41.278 1.00 64.05 C
ATOM 18 C6 A A 12 27.279 23.891 40.287 1.00 64.40 C
ATOM 19 N6 A A 12 26.297 23.022 40.543 1.00 59.75 N
ATOM 20 N1 A A 12 27.673 24.059 39.010 1.00 66.09 N
ATOM 21 C2 A A 12 28.676 24.925 38.759 1.00 67.16 C
ATOM 22 N3 A A 12 29.382 25.683 39.610 1.00 66.62 N
ATOM 23 C4 A A 12 28.957 25.494 40.865 1.00 64.87 C
ATOM 24 P C A 13 28.709 31.557 41.484 1.00 73.40 P
ATOM 25 OP1 C A 13 29.375 32.790 41.022 1.00 75.34 O
ATOM 26 OP2 C A 13 27.781 31.613 42.633 1.00 72.23 O
ATOM 27 O5' C A 13 27.961 30.860 40.258 1.00 72.58 O
TER

ATOM 1 O3' U B 10 27.393 22.928 50.645 1.00 57.31 O
ATOM 2 P U B 11 27.189 24.488 50.730 1.00 55.54 P
ATOM 3 OP1 U B 11 27.120 24.869 52.177 1.00 53.19 O
ATOM 4 OP2 U B 11 26.037 24.931 49.902 1.00 50.26 O
ATOM 5 O5' U B 11 28.553 25.047 50.130 1.00 56.50 O
ATOM 6 C5' U B 11 28.628 26.446 49.839 1.00 60.27 C
ATOM 7 C4' U B 11 29.188 26.567 48.461 1.00 62.39 C
ATOM 8 O4' U B 11 30.346 25.715 48.362 1.00 60.98 O
ATOM 9 C3' U B 11 28.256 26.137 47.341 1.00 62.41 C
ATOM 10 O3' U B 11 28.375 26.871 46.169 1.00 65.18 O
ATOM 11 C2' U B 11 28.647 24.707 47.108 1.00 58.91 C
ATOM 12 O2' U B 11 28.289 24.269 45.812 1.00 66.85 O
ATOM 13 C1' U B 11 30.139 24.794 47.311 1.00 58.33 C
ATOM 14 N1 U B 11 30.859 23.561 47.601 1.00 58.29 N
ATOM 15 C2 U B 11 31.745 23.148 46.646 1.00 59.30 C
ATOM 16 O2 U B 11 32.003 23.799 45.653 1.00 57.89 O
ATOM 17 N3 U B 11 32.331 21.942 46.897 1.00 57.34 N
ATOM 18 C4 U B 11 32.132 21.151 47.986 1.00 60.09 C
ATOM 19 O4 U B 11 32.715 20.079 48.095 1.00 60.01 O
ATOM 20 C5 U B 11 31.226 21.683 48.944 1.00 59.60 C
ATOM 21 C6 U B 11 30.640 22.846 48.720 1.00 60.33 C
ATOM 22 P A B 12 27.377 28.048 45.902 1.00 64.92 P
ATOM 23 OP1 A B 12 27.490 29.021 47.020 1.00 65.60 O
ATOM 24 OP2 A B 12 26.041 27.457 45.570 1.00 61.90 O
ATOM 25 O5' A B 12 28.115 28.653 44.625 1.00 63.70 O
TER

Atoms:
OP1: (27.490,29.021,47.020)
OP2: (26.041,27.457,45.570)
C3': (29.658,29.222,42.172)
C1': (30.535,27.039,42.140)
C5': (29.426,29.232,44.742)
O4': (30.542,27.500,43.479)
C8: (28.677,25.583,43.026)
O2': (31.719,28.722,40.986)
C6: (27.279,23.891,40.287)
C5: (27.939,24.645,41.278)
C4: (28.957,25.494,40.865)
P: (27.377,28.048,45.902)
C4': (30.268,28.916,43.523)
C2': (30.413,28.269,41.254)
C2: (28.676,24.925,38.759)
N1: (27.673,24.059,39.010)
N3: (29.382,25.683,39.610)
N6: (26.297,23.022,40.543)
N7: (27.772,24.715,42.645)
N9: (29.434,26.086,42.005)
O5': (28.115,28.653,44.625)
O3': (29.925,30.569,41.831)
C4: (32.132,21.151,47.986)
N3: (32.331,21.942,46.897)
OP1: (27.120,24.869,52.177)
OP2: (26.037,24.931,49.902)
C2: (31.745,23.148,46.646)
C1': (30.139,24.794,47.311)
C3': (28.256,26.137,47.341)
O5': (28.553,25.047,50.130)
O4': (30.346,25.715,48.362)
C5': (28.628,26.446,49.839)
P: (27.189,24.488,50.730)
C4': (29.188,26.567,48.461)
C2': (28.647,24.707,47.108)
O2': (28.289,24.269,45.812)
N1: (30.859,23.561,47.601)
O4: (32.715,20.079,48.095)
O2: (32.003,23.799,45.653)
C6: (30.640,22.846,48.720)
C5: (31.226,21.683,48.944)
O3': (28.375,26.871,46.169)
Image (generated by PyMOL):
PyMOL image
show in jmol