Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1272:A1271
Extra
PDB:
ATOM 1 O3' U A1271 14.213 -74.133 -16.535 1.00 58.78 O
ATOM 2 P A A1272 14.943 -75.328 -15.776 1.00 53.75 P
ATOM 3 OP1 A A1272 14.051 -75.733 -14.663 1.00 55.24 O
ATOM 4 OP2 A A1272 16.322 -74.863 -15.478 1.00 58.40 O
ATOM 5 O5' A A1272 15.062 -76.472 -16.887 1.00 45.57 O
ATOM 6 C5' A A1272 13.908 -77.158 -17.398 1.00 51.70 C
ATOM 7 C4' A A1272 14.319 -78.317 -18.293 1.00 57.53 C
ATOM 8 O4' A A1272 14.772 -77.841 -19.590 1.00 59.09 O
ATOM 9 C3' A A1272 15.473 -79.149 -17.755 1.00 58.67 C
ATOM 10 O3' A A1272 15.022 -80.106 -16.801 1.00 55.76 O
ATOM 11 C2' A A1272 16.096 -79.747 -19.015 1.00 55.20 C
ATOM 12 O2' A A1272 15.509 -80.965 -19.408 1.00 45.65 O
ATOM 13 C1' A A1272 15.868 -78.630 -20.042 1.00 55.89 C
ATOM 14 N9 A A1272 17.043 -77.758 -20.124 1.00 61.13 N
ATOM 15 C8 A A1272 17.228 -76.584 -19.436 1.00 61.74 C
ATOM 16 N7 A A1272 18.409 -76.047 -19.611 1.00 66.04 N
ATOM 17 C5 A A1272 19.044 -76.910 -20.489 1.00 62.12 C
ATOM 18 C6 A A1272 20.332 -76.909 -21.038 1.00 60.93 C
ATOM 19 N6 A A1272 21.262 -75.998 -20.740 1.00 62.93 N
ATOM 20 N1 A A1272 20.646 -77.898 -21.899 1.00 60.27 N
ATOM 21 C2 A A1272 19.728 -78.835 -22.160 1.00 59.05 C
ATOM 22 N3 A A1272 18.491 -78.962 -21.684 1.00 59.54 N
ATOM 23 C4 A A1272 18.204 -77.955 -20.841 1.00 60.51 C
ATOM 24 P C A1273 16.092 -81.013 -16.017 1.00 62.37 P
ATOM 25 OP1 C A1273 15.409 -81.772 -14.935 1.00 57.81 O
ATOM 26 OP2 C A1273 17.282 -80.177 -15.677 1.00 56.35 O
ATOM 27 O5' C A1273 16.487 -82.051 -17.144 1.00 55.63 O
TER
ATOM 1 O3' C B1270 15.881 -68.427 -16.166 1.00 64.50 O
ATOM 2 P U B1271 16.222 -69.827 -15.441 1.00 67.92 P
ATOM 3 OP1 U B1271 15.329 -69.959 -14.271 1.00 67.94 O
ATOM 4 OP2 U B1271 17.695 -69.828 -15.234 1.00 69.34 O
ATOM 5 O5' U B1271 15.823 -70.937 -16.527 1.00 56.31 O
ATOM 6 C5' U B1271 14.501 -70.946 -17.087 1.00 59.91 C
ATOM 7 C4' U B1271 14.275 -72.154 -17.982 1.00 63.82 C
ATOM 8 O4' U B1271 14.766 -71.947 -19.335 1.00 67.00 O
ATOM 9 C3' U B1271 14.904 -73.467 -17.564 1.00 62.57 C
ATOM 10 O3' U B1271 14.213 -74.133 -16.535 1.00 58.78 O
ATOM 11 C2' U B1271 14.878 -74.284 -18.848 1.00 65.44 C
ATOM 12 O2' U B1271 13.646 -74.944 -19.036 1.00 60.79 O
ATOM 13 C1' U B1271 15.098 -73.207 -19.914 1.00 65.25 C
ATOM 14 N1 U B1271 16.511 -73.203 -20.323 1.00 63.75 N
ATOM 15 C2 U B1271 16.893 -74.007 -21.392 1.00 64.10 C
ATOM 16 O2 U B1271 16.103 -74.653 -22.072 1.00 60.66 O
ATOM 17 N3 U B1271 18.241 -74.021 -21.638 1.00 63.41 N
ATOM 18 C4 U B1271 19.220 -73.323 -20.957 1.00 63.72 C
ATOM 19 O4 U B1271 20.401 -73.543 -21.200 1.00 59.54 O
ATOM 20 C5 U B1271 18.740 -72.487 -19.914 1.00 68.35 C
ATOM 21 C6 U B1271 17.438 -72.455 -19.637 1.00 67.60 C
ATOM 22 P A B1272 14.943 -75.328 -15.776 1.00 53.75 P
ATOM 23 OP1 A B1272 14.051 -75.733 -14.663 1.00 55.24 O
ATOM 24 OP2 A B1272 16.322 -74.863 -15.478 1.00 58.40 O
ATOM 25 O5' A B1272 15.062 -76.472 -16.887 1.00 45.57 O
TER
ATOM 2 P A A1272 14.943 -75.328 -15.776 1.00 53.75 P
ATOM 3 OP1 A A1272 14.051 -75.733 -14.663 1.00 55.24 O
ATOM 4 OP2 A A1272 16.322 -74.863 -15.478 1.00 58.40 O
ATOM 5 O5' A A1272 15.062 -76.472 -16.887 1.00 45.57 O
ATOM 6 C5' A A1272 13.908 -77.158 -17.398 1.00 51.70 C
ATOM 7 C4' A A1272 14.319 -78.317 -18.293 1.00 57.53 C
ATOM 8 O4' A A1272 14.772 -77.841 -19.590 1.00 59.09 O
ATOM 9 C3' A A1272 15.473 -79.149 -17.755 1.00 58.67 C
ATOM 10 O3' A A1272 15.022 -80.106 -16.801 1.00 55.76 O
ATOM 11 C2' A A1272 16.096 -79.747 -19.015 1.00 55.20 C
ATOM 12 O2' A A1272 15.509 -80.965 -19.408 1.00 45.65 O
ATOM 13 C1' A A1272 15.868 -78.630 -20.042 1.00 55.89 C
ATOM 14 N9 A A1272 17.043 -77.758 -20.124 1.00 61.13 N
ATOM 15 C8 A A1272 17.228 -76.584 -19.436 1.00 61.74 C
ATOM 16 N7 A A1272 18.409 -76.047 -19.611 1.00 66.04 N
ATOM 17 C5 A A1272 19.044 -76.910 -20.489 1.00 62.12 C
ATOM 18 C6 A A1272 20.332 -76.909 -21.038 1.00 60.93 C
ATOM 19 N6 A A1272 21.262 -75.998 -20.740 1.00 62.93 N
ATOM 20 N1 A A1272 20.646 -77.898 -21.899 1.00 60.27 N
ATOM 21 C2 A A1272 19.728 -78.835 -22.160 1.00 59.05 C
ATOM 22 N3 A A1272 18.491 -78.962 -21.684 1.00 59.54 N
ATOM 23 C4 A A1272 18.204 -77.955 -20.841 1.00 60.51 C
ATOM 24 P C A1273 16.092 -81.013 -16.017 1.00 62.37 P
ATOM 25 OP1 C A1273 15.409 -81.772 -14.935 1.00 57.81 O
ATOM 26 OP2 C A1273 17.282 -80.177 -15.677 1.00 56.35 O
ATOM 27 O5' C A1273 16.487 -82.051 -17.144 1.00 55.63 O
TER
ATOM 1 O3' C B1270 15.881 -68.427 -16.166 1.00 64.50 O
ATOM 2 P U B1271 16.222 -69.827 -15.441 1.00 67.92 P
ATOM 3 OP1 U B1271 15.329 -69.959 -14.271 1.00 67.94 O
ATOM 4 OP2 U B1271 17.695 -69.828 -15.234 1.00 69.34 O
ATOM 5 O5' U B1271 15.823 -70.937 -16.527 1.00 56.31 O
ATOM 6 C5' U B1271 14.501 -70.946 -17.087 1.00 59.91 C
ATOM 7 C4' U B1271 14.275 -72.154 -17.982 1.00 63.82 C
ATOM 8 O4' U B1271 14.766 -71.947 -19.335 1.00 67.00 O
ATOM 9 C3' U B1271 14.904 -73.467 -17.564 1.00 62.57 C
ATOM 10 O3' U B1271 14.213 -74.133 -16.535 1.00 58.78 O
ATOM 11 C2' U B1271 14.878 -74.284 -18.848 1.00 65.44 C
ATOM 12 O2' U B1271 13.646 -74.944 -19.036 1.00 60.79 O
ATOM 13 C1' U B1271 15.098 -73.207 -19.914 1.00 65.25 C
ATOM 14 N1 U B1271 16.511 -73.203 -20.323 1.00 63.75 N
ATOM 15 C2 U B1271 16.893 -74.007 -21.392 1.00 64.10 C
ATOM 16 O2 U B1271 16.103 -74.653 -22.072 1.00 60.66 O
ATOM 17 N3 U B1271 18.241 -74.021 -21.638 1.00 63.41 N
ATOM 18 C4 U B1271 19.220 -73.323 -20.957 1.00 63.72 C
ATOM 19 O4 U B1271 20.401 -73.543 -21.200 1.00 59.54 O
ATOM 20 C5 U B1271 18.740 -72.487 -19.914 1.00 68.35 C
ATOM 21 C6 U B1271 17.438 -72.455 -19.637 1.00 67.60 C
ATOM 22 P A B1272 14.943 -75.328 -15.776 1.00 53.75 P
ATOM 23 OP1 A B1272 14.051 -75.733 -14.663 1.00 55.24 O
ATOM 24 OP2 A B1272 16.322 -74.863 -15.478 1.00 58.40 O
ATOM 25 O5' A B1272 15.062 -76.472 -16.887 1.00 45.57 O
TER
Atoms:
OP1: (14.051,-75.733,-14.663)
OP2: (16.322,-74.863,-15.478)
C3': (15.473,-79.149,-17.755)
C1': (15.868,-78.630,-20.042)
C5': (13.908,-77.158,-17.398)
O4': (14.772,-77.841,-19.590)
C8: (17.228,-76.584,-19.436)
O2': (15.509,-80.965,-19.408)
C6: (20.332,-76.909,-21.038)
C5: (19.044,-76.910,-20.489)
C4: (18.204,-77.955,-20.841)
P: (14.943,-75.328,-15.776)
C4': (14.319,-78.317,-18.293)
C2': (16.096,-79.747,-19.015)
C2: (19.728,-78.835,-22.160)
N1: (20.646,-77.898,-21.899)
N3: (18.491,-78.962,-21.684)
N6: (21.262,-75.998,-20.740)
N7: (18.409,-76.047,-19.611)
N9: (17.043,-77.758,-20.124)
O5': (15.062,-76.472,-16.887)
O3': (15.022,-80.106,-16.801)
OP2: (16.322,-74.863,-15.478)
C3': (15.473,-79.149,-17.755)
C1': (15.868,-78.630,-20.042)
C5': (13.908,-77.158,-17.398)
O4': (14.772,-77.841,-19.590)
C8: (17.228,-76.584,-19.436)
O2': (15.509,-80.965,-19.408)
C6: (20.332,-76.909,-21.038)
C5: (19.044,-76.910,-20.489)
C4: (18.204,-77.955,-20.841)
P: (14.943,-75.328,-15.776)
C4': (14.319,-78.317,-18.293)
C2': (16.096,-79.747,-19.015)
C2: (19.728,-78.835,-22.160)
N1: (20.646,-77.898,-21.899)
N3: (18.491,-78.962,-21.684)
N6: (21.262,-75.998,-20.740)
N7: (18.409,-76.047,-19.611)
N9: (17.043,-77.758,-20.124)
O5': (15.062,-76.472,-16.887)
O3': (15.022,-80.106,-16.801)
C4: (19.220,-73.323,-20.957)
N3: (18.241,-74.021,-21.638)
OP1: (15.329,-69.959,-14.271)
OP2: (17.695,-69.828,-15.234)
C2: (16.893,-74.007,-21.392)
C1': (15.098,-73.207,-19.914)
C3': (14.904,-73.467,-17.564)
O5': (15.823,-70.937,-16.527)
O4': (14.766,-71.947,-19.335)
C5': (14.501,-70.946,-17.087)
P: (16.222,-69.827,-15.441)
C4': (14.275,-72.154,-17.982)
C2': (14.878,-74.284,-18.848)
O2': (13.646,-74.944,-19.036)
N1: (16.511,-73.203,-20.323)
O4: (20.401,-73.543,-21.200)
O2: (16.103,-74.653,-22.072)
C6: (17.438,-72.455,-19.637)
C5: (18.740,-72.487,-19.914)
O3': (14.213,-74.133,-16.535)
N3: (18.241,-74.021,-21.638)
OP1: (15.329,-69.959,-14.271)
OP2: (17.695,-69.828,-15.234)
C2: (16.893,-74.007,-21.392)
C1': (15.098,-73.207,-19.914)
C3': (14.904,-73.467,-17.564)
O5': (15.823,-70.937,-16.527)
O4': (14.766,-71.947,-19.335)
C5': (14.501,-70.946,-17.087)
P: (16.222,-69.827,-15.441)
C4': (14.275,-72.154,-17.982)
C2': (14.878,-74.284,-18.848)
O2': (13.646,-74.944,-19.036)
N1: (16.511,-73.203,-20.323)
O4: (20.401,-73.543,-21.200)
O2: (16.103,-74.653,-22.072)
C6: (17.438,-72.455,-19.637)
C5: (18.740,-72.487,-19.914)
O3': (14.213,-74.133,-16.535)
Image (generated by PyMOL):