Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5O:E61:E60
Extra
PDB:
ATOM 1 O3' U A 60 -6.247 18.811 121.684 1.00 87.73 O
ATOM 2 P A A 61 -6.959 17.401 121.383 1.00 81.61 P
ATOM 3 OP1 A A 61 -7.743 17.014 122.579 1.00 83.17 O
ATOM 4 OP2 A A 61 -5.945 16.466 120.841 1.00 98.91 O
ATOM 5 O5' A A 61 -7.988 17.745 120.216 1.00 92.66 O
ATOM 6 C5' A A 61 -8.343 19.097 119.918 1.00 84.08 C
ATOM 7 C4' A A 61 -8.662 19.234 118.447 1.00 90.42 C
ATOM 8 O4' A A 61 -7.461 18.966 117.676 1.00 87.87 O
ATOM 9 C3' A A 61 -9.698 18.248 117.926 1.00 90.89 C
ATOM 10 O3' A A 61 -11.011 18.786 118.064 1.00 98.37 O
ATOM 11 C2' A A 61 -9.310 18.107 116.459 1.00 95.08 C
ATOM 12 O2' A A 61 -9.797 19.167 115.661 1.00 98.38 O
ATOM 13 C1' A A 61 -7.783 18.184 116.537 1.00 88.00 C
ATOM 14 N9 A A 61 -7.130 16.882 116.685 1.00 80.24 N
ATOM 15 C8 A A 61 -6.273 16.492 117.684 1.00 80.11 C
ATOM 16 N7 A A 61 -5.842 15.261 117.564 1.00 80.51 N
ATOM 17 C5 A A 61 -6.455 14.806 116.406 1.00 78.93 C
ATOM 18 C6 A A 61 -6.409 13.572 115.736 1.00 79.63 C
ATOM 19 N6 A A 61 -5.688 12.527 116.153 1.00 78.88 N
ATOM 20 N1 A A 61 -7.139 13.445 114.607 1.00 79.07 N
ATOM 21 C2 A A 61 -7.862 14.492 114.192 1.00 79.37 C
ATOM 22 N3 A A 61 -7.987 15.701 114.735 1.00 78.30 N
ATOM 23 C4 A A 61 -7.250 15.795 115.853 1.00 78.30 C
ATOM 24 P C A 62 -12.223 17.838 118.534 1.00 93.11 P
ATOM 25 OP1 C A 62 -13.487 18.513 118.150 1.00 99.39 O
ATOM 26 OP2 C A 62 -11.997 17.455 119.951 1.00 95.44 O
ATOM 27 O5' C A 62 -12.068 16.530 117.640 1.00 89.60 O
TER
ATOM 1 O3' U B 59 -0.100 18.120 123.809 1.00 87.41 O
ATOM 2 P U B 60 -1.575 18.288 124.430 1.00 69.44 P
ATOM 3 OP1 U B 60 -1.469 19.244 125.556 1.00 74.44 O
ATOM 4 OP2 U B 60 -2.153 16.941 124.666 1.00 79.73 O
ATOM 5 O5' U B 60 -2.407 18.997 123.269 1.00 86.98 O
ATOM 6 C5' U B 60 -3.403 19.964 123.585 1.00 85.84 C
ATOM 7 C4' U B 60 -4.320 20.199 122.405 1.00 85.63 C
ATOM 8 O4' U B 60 -3.586 20.874 121.347 1.00 87.82 O
ATOM 9 C3' U B 60 -4.825 18.895 121.797 1.00 81.80 C
ATOM 10 O3' U B 60 -6.247 18.811 121.684 1.00 87.73 O
ATOM 11 C2' U B 60 -3.944 18.620 120.576 1.00 81.54 C
ATOM 12 O2' U B 60 -4.682 18.172 119.461 1.00100.32 O
ATOM 13 C1' U B 60 -3.438 20.021 120.232 1.00 85.08 C
ATOM 14 N1 U B 60 -2.085 20.154 119.673 1.00 86.10 N
ATOM 15 C2 U B 60 -1.969 20.102 118.293 1.00 85.01 C
ATOM 16 O2 U B 60 -2.924 19.946 117.554 1.00 84.96 O
ATOM 17 N3 U B 60 -0.695 20.244 117.811 1.00 85.35 N
ATOM 18 C4 U B 60 0.453 20.427 118.546 1.00 86.94 C
ATOM 19 O4 U B 60 1.532 20.536 117.960 1.00 88.31 O
ATOM 20 C5 U B 60 0.255 20.468 119.966 1.00 86.94 C
ATOM 21 C6 U B 60 -0.979 20.331 120.468 1.00 86.24 C
ATOM 22 P A B 61 -6.959 17.401 121.383 1.00 81.61 P
ATOM 23 OP1 A B 61 -7.743 17.014 122.579 1.00 83.17 O
ATOM 24 OP2 A B 61 -5.945 16.466 120.841 1.00 98.91 O
ATOM 25 O5' A B 61 -7.988 17.745 120.216 1.00 92.66 O
TER
ATOM 2 P A A 61 -6.959 17.401 121.383 1.00 81.61 P
ATOM 3 OP1 A A 61 -7.743 17.014 122.579 1.00 83.17 O
ATOM 4 OP2 A A 61 -5.945 16.466 120.841 1.00 98.91 O
ATOM 5 O5' A A 61 -7.988 17.745 120.216 1.00 92.66 O
ATOM 6 C5' A A 61 -8.343 19.097 119.918 1.00 84.08 C
ATOM 7 C4' A A 61 -8.662 19.234 118.447 1.00 90.42 C
ATOM 8 O4' A A 61 -7.461 18.966 117.676 1.00 87.87 O
ATOM 9 C3' A A 61 -9.698 18.248 117.926 1.00 90.89 C
ATOM 10 O3' A A 61 -11.011 18.786 118.064 1.00 98.37 O
ATOM 11 C2' A A 61 -9.310 18.107 116.459 1.00 95.08 C
ATOM 12 O2' A A 61 -9.797 19.167 115.661 1.00 98.38 O
ATOM 13 C1' A A 61 -7.783 18.184 116.537 1.00 88.00 C
ATOM 14 N9 A A 61 -7.130 16.882 116.685 1.00 80.24 N
ATOM 15 C8 A A 61 -6.273 16.492 117.684 1.00 80.11 C
ATOM 16 N7 A A 61 -5.842 15.261 117.564 1.00 80.51 N
ATOM 17 C5 A A 61 -6.455 14.806 116.406 1.00 78.93 C
ATOM 18 C6 A A 61 -6.409 13.572 115.736 1.00 79.63 C
ATOM 19 N6 A A 61 -5.688 12.527 116.153 1.00 78.88 N
ATOM 20 N1 A A 61 -7.139 13.445 114.607 1.00 79.07 N
ATOM 21 C2 A A 61 -7.862 14.492 114.192 1.00 79.37 C
ATOM 22 N3 A A 61 -7.987 15.701 114.735 1.00 78.30 N
ATOM 23 C4 A A 61 -7.250 15.795 115.853 1.00 78.30 C
ATOM 24 P C A 62 -12.223 17.838 118.534 1.00 93.11 P
ATOM 25 OP1 C A 62 -13.487 18.513 118.150 1.00 99.39 O
ATOM 26 OP2 C A 62 -11.997 17.455 119.951 1.00 95.44 O
ATOM 27 O5' C A 62 -12.068 16.530 117.640 1.00 89.60 O
TER
ATOM 1 O3' U B 59 -0.100 18.120 123.809 1.00 87.41 O
ATOM 2 P U B 60 -1.575 18.288 124.430 1.00 69.44 P
ATOM 3 OP1 U B 60 -1.469 19.244 125.556 1.00 74.44 O
ATOM 4 OP2 U B 60 -2.153 16.941 124.666 1.00 79.73 O
ATOM 5 O5' U B 60 -2.407 18.997 123.269 1.00 86.98 O
ATOM 6 C5' U B 60 -3.403 19.964 123.585 1.00 85.84 C
ATOM 7 C4' U B 60 -4.320 20.199 122.405 1.00 85.63 C
ATOM 8 O4' U B 60 -3.586 20.874 121.347 1.00 87.82 O
ATOM 9 C3' U B 60 -4.825 18.895 121.797 1.00 81.80 C
ATOM 10 O3' U B 60 -6.247 18.811 121.684 1.00 87.73 O
ATOM 11 C2' U B 60 -3.944 18.620 120.576 1.00 81.54 C
ATOM 12 O2' U B 60 -4.682 18.172 119.461 1.00100.32 O
ATOM 13 C1' U B 60 -3.438 20.021 120.232 1.00 85.08 C
ATOM 14 N1 U B 60 -2.085 20.154 119.673 1.00 86.10 N
ATOM 15 C2 U B 60 -1.969 20.102 118.293 1.00 85.01 C
ATOM 16 O2 U B 60 -2.924 19.946 117.554 1.00 84.96 O
ATOM 17 N3 U B 60 -0.695 20.244 117.811 1.00 85.35 N
ATOM 18 C4 U B 60 0.453 20.427 118.546 1.00 86.94 C
ATOM 19 O4 U B 60 1.532 20.536 117.960 1.00 88.31 O
ATOM 20 C5 U B 60 0.255 20.468 119.966 1.00 86.94 C
ATOM 21 C6 U B 60 -0.979 20.331 120.468 1.00 86.24 C
ATOM 22 P A B 61 -6.959 17.401 121.383 1.00 81.61 P
ATOM 23 OP1 A B 61 -7.743 17.014 122.579 1.00 83.17 O
ATOM 24 OP2 A B 61 -5.945 16.466 120.841 1.00 98.91 O
ATOM 25 O5' A B 61 -7.988 17.745 120.216 1.00 92.66 O
TER
Atoms:
OP1: (-7.743,17.014,122.579)
OP2: (-5.945,16.466,120.841)
C3': (-9.698,18.248,117.926)
C1': (-7.783,18.184,116.537)
C5': (-8.343,19.097,119.918)
O4': (-7.461,18.966,117.676)
C8: (-6.273,16.492,117.684)
O2': (-9.797,19.167,115.661)
C6: (-6.409,13.572,115.736)
C5: (-6.455,14.806,116.406)
C4: (-7.250,15.795,115.853)
P: (-6.959,17.401,121.383)
C4': (-8.662,19.234,118.447)
C2': (-9.310,18.107,116.459)
C2: (-7.862,14.492,114.192)
N1: (-7.139,13.445,114.607)
N3: (-7.987,15.701,114.735)
N6: (-5.688,12.527,116.153)
N7: (-5.842,15.261,117.564)
N9: (-7.130,16.882,116.685)
O5': (-7.988,17.745,120.216)
O3': (-11.011,18.786,118.064)
OP2: (-5.945,16.466,120.841)
C3': (-9.698,18.248,117.926)
C1': (-7.783,18.184,116.537)
C5': (-8.343,19.097,119.918)
O4': (-7.461,18.966,117.676)
C8: (-6.273,16.492,117.684)
O2': (-9.797,19.167,115.661)
C6: (-6.409,13.572,115.736)
C5: (-6.455,14.806,116.406)
C4: (-7.250,15.795,115.853)
P: (-6.959,17.401,121.383)
C4': (-8.662,19.234,118.447)
C2': (-9.310,18.107,116.459)
C2: (-7.862,14.492,114.192)
N1: (-7.139,13.445,114.607)
N3: (-7.987,15.701,114.735)
N6: (-5.688,12.527,116.153)
N7: (-5.842,15.261,117.564)
N9: (-7.130,16.882,116.685)
O5': (-7.988,17.745,120.216)
O3': (-11.011,18.786,118.064)
C4: (0.453,20.427,118.546)
N3: (-0.695,20.244,117.811)
OP1: (-1.469,19.244,125.556)
OP2: (-2.153,16.941,124.666)
C2: (-1.969,20.102,118.293)
C1': (-3.438,20.021,120.232)
C3': (-4.825,18.895,121.797)
O5': (-2.407,18.997,123.269)
O4': (-3.586,20.874,121.347)
C5': (-3.403,19.964,123.585)
P: (-1.575,18.288,124.430)
C4': (-4.320,20.199,122.405)
C2': (-3.944,18.620,120.576)
O2': (-4.682,18.172,119.461)
N1: (-2.085,20.154,119.673)
O4: (1.532,20.536,117.960)
O2: (-2.924,19.946,117.554)
C6: (-0.979,20.331,120.468)
C5: (0.255,20.468,119.966)
O3': (-6.247,18.811,121.684)
N3: (-0.695,20.244,117.811)
OP1: (-1.469,19.244,125.556)
OP2: (-2.153,16.941,124.666)
C2: (-1.969,20.102,118.293)
C1': (-3.438,20.021,120.232)
C3': (-4.825,18.895,121.797)
O5': (-2.407,18.997,123.269)
O4': (-3.586,20.874,121.347)
C5': (-3.403,19.964,123.585)
P: (-1.575,18.288,124.430)
C4': (-4.320,20.199,122.405)
C2': (-3.944,18.620,120.576)
O2': (-4.682,18.172,119.461)
N1: (-2.085,20.154,119.673)
O4: (1.532,20.536,117.960)
O2: (-2.924,19.946,117.554)
C6: (-0.979,20.331,120.468)
C5: (0.255,20.468,119.966)
O3': (-6.247,18.811,121.684)
Image (generated by PyMOL):