Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12267:12266
Extra
PDB:
ATOM 1 O3' U A2266 14.411 -30.944 142.226 1.00 57.45 O
ATOM 2 P A A2267 14.533 -29.901 141.015 1.00 62.23 P
ATOM 3 OP1 A A2267 15.589 -28.936 141.379 1.00 62.24 O
ATOM 4 OP2 A A2267 13.159 -29.388 140.717 1.00 62.14 O
ATOM 5 O5' A A2267 15.035 -30.831 139.820 1.00 61.76 O
ATOM 6 C5' A A2267 16.325 -31.448 139.871 1.00 61.77 C
ATOM 7 C4' A A2267 16.733 -32.024 138.531 1.00 61.22 C
ATOM 8 O4' A A2267 15.828 -33.096 138.183 1.00 61.25 O
ATOM 9 C3' A A2267 16.670 -31.070 137.342 1.00 60.61 C
ATOM 10 O3' A A2267 17.850 -30.290 137.199 1.00 60.40 O
ATOM 11 C2' A A2267 16.422 -32.013 136.171 1.00 60.23 C
ATOM 12 O2' A A2267 17.626 -32.655 135.783 1.00 60.07 O
ATOM 13 C1' A A2267 15.533 -33.066 136.811 1.00 60.67 C
ATOM 14 N9 A A2267 14.095 -32.791 136.637 1.00 60.66 N
ATOM 15 C8 A A2267 13.206 -32.487 137.609 1.00 61.10 C
ATOM 16 N7 A A2267 11.988 -32.314 137.143 1.00 60.98 N
ATOM 17 C5 A A2267 12.063 -32.527 135.781 1.00 60.43 C
ATOM 18 C6 A A2267 11.105 -32.504 134.734 1.00 60.07 C
ATOM 19 N6 A A2267 9.799 -32.229 134.850 1.00 60.20 N
ATOM 20 N1 A A2267 11.561 -32.779 133.491 1.00 59.56 N
ATOM 21 C2 A A2267 12.854 -33.058 133.336 1.00 59.43 C
ATOM 22 N3 A A2267 13.830 -33.108 134.232 1.00 59.73 N
ATOM 23 C4 A A2267 13.372 -32.828 135.462 1.00 60.23 C
ATOM 24 P U A2268 17.776 -28.696 136.959 1.00 67.43 P
ATOM 25 OP1 U A2268 19.161 -28.214 136.798 1.00 67.25 O
ATOM 26 OP2 U A2268 16.948 -28.122 138.035 1.00 67.89 O
ATOM 27 O5' U A2268 17.028 -28.580 135.583 1.00 66.88 O
TER
ATOM 1 O3' U B2265 8.571 -31.200 144.298 1.00 73.82 O
ATOM 2 P U B2266 9.741 -31.752 145.260 1.00 59.28 P
ATOM 3 OP1 U B2266 9.739 -33.238 145.208 1.00 59.42 O
ATOM 4 OP2 U B2266 9.574 -31.089 146.558 1.00 59.85 O
ATOM 5 O5' U B2266 11.051 -31.217 144.602 1.00 58.81 O
ATOM 6 C5' U B2266 12.305 -31.457 145.243 1.00 59.05 C
ATOM 7 C4' U B2266 13.377 -31.782 144.245 1.00 58.54 C
ATOM 8 O4' U B2266 13.417 -33.221 144.060 1.00 58.61 O
ATOM 9 C3' U B2266 13.149 -31.180 142.860 1.00 57.85 C
ATOM 10 O3' U B2266 14.411 -30.944 142.226 1.00 57.45 O
ATOM 11 C2' U B2266 12.405 -32.312 142.163 1.00 57.70 C
ATOM 12 O2' U B2266 12.397 -32.262 140.753 1.00 57.06 O
ATOM 13 C1' U B2266 13.141 -33.530 142.714 1.00 58.04 C
ATOM 14 N1 U B2266 12.358 -34.748 142.683 1.00 58.23 N
ATOM 15 C2 U B2266 12.663 -35.582 141.670 1.00 57.86 C
ATOM 16 O2 U B2266 13.538 -35.311 140.901 1.00 57.42 O
ATOM 17 N3 U B2266 11.948 -36.717 141.569 1.00 58.02 N
ATOM 18 C4 U B2266 10.955 -37.094 142.425 1.00 58.53 C
ATOM 19 O4 U B2266 10.375 -38.181 142.239 1.00 58.65 O
ATOM 20 C5 U B2266 10.699 -36.147 143.483 1.00 58.90 C
ATOM 21 C6 U B2266 11.395 -35.017 143.581 1.00 58.75 C
ATOM 22 P A B2267 14.533 -29.901 141.015 1.00 62.23 P
ATOM 23 OP1 A B2267 15.589 -28.936 141.379 1.00 62.24 O
ATOM 24 OP2 A B2267 13.159 -29.388 140.717 1.00 62.14 O
ATOM 25 O5' A B2267 15.035 -30.831 139.820 1.00 61.76 O
TER
ATOM 2 P A A2267 14.533 -29.901 141.015 1.00 62.23 P
ATOM 3 OP1 A A2267 15.589 -28.936 141.379 1.00 62.24 O
ATOM 4 OP2 A A2267 13.159 -29.388 140.717 1.00 62.14 O
ATOM 5 O5' A A2267 15.035 -30.831 139.820 1.00 61.76 O
ATOM 6 C5' A A2267 16.325 -31.448 139.871 1.00 61.77 C
ATOM 7 C4' A A2267 16.733 -32.024 138.531 1.00 61.22 C
ATOM 8 O4' A A2267 15.828 -33.096 138.183 1.00 61.25 O
ATOM 9 C3' A A2267 16.670 -31.070 137.342 1.00 60.61 C
ATOM 10 O3' A A2267 17.850 -30.290 137.199 1.00 60.40 O
ATOM 11 C2' A A2267 16.422 -32.013 136.171 1.00 60.23 C
ATOM 12 O2' A A2267 17.626 -32.655 135.783 1.00 60.07 O
ATOM 13 C1' A A2267 15.533 -33.066 136.811 1.00 60.67 C
ATOM 14 N9 A A2267 14.095 -32.791 136.637 1.00 60.66 N
ATOM 15 C8 A A2267 13.206 -32.487 137.609 1.00 61.10 C
ATOM 16 N7 A A2267 11.988 -32.314 137.143 1.00 60.98 N
ATOM 17 C5 A A2267 12.063 -32.527 135.781 1.00 60.43 C
ATOM 18 C6 A A2267 11.105 -32.504 134.734 1.00 60.07 C
ATOM 19 N6 A A2267 9.799 -32.229 134.850 1.00 60.20 N
ATOM 20 N1 A A2267 11.561 -32.779 133.491 1.00 59.56 N
ATOM 21 C2 A A2267 12.854 -33.058 133.336 1.00 59.43 C
ATOM 22 N3 A A2267 13.830 -33.108 134.232 1.00 59.73 N
ATOM 23 C4 A A2267 13.372 -32.828 135.462 1.00 60.23 C
ATOM 24 P U A2268 17.776 -28.696 136.959 1.00 67.43 P
ATOM 25 OP1 U A2268 19.161 -28.214 136.798 1.00 67.25 O
ATOM 26 OP2 U A2268 16.948 -28.122 138.035 1.00 67.89 O
ATOM 27 O5' U A2268 17.028 -28.580 135.583 1.00 66.88 O
TER
ATOM 1 O3' U B2265 8.571 -31.200 144.298 1.00 73.82 O
ATOM 2 P U B2266 9.741 -31.752 145.260 1.00 59.28 P
ATOM 3 OP1 U B2266 9.739 -33.238 145.208 1.00 59.42 O
ATOM 4 OP2 U B2266 9.574 -31.089 146.558 1.00 59.85 O
ATOM 5 O5' U B2266 11.051 -31.217 144.602 1.00 58.81 O
ATOM 6 C5' U B2266 12.305 -31.457 145.243 1.00 59.05 C
ATOM 7 C4' U B2266 13.377 -31.782 144.245 1.00 58.54 C
ATOM 8 O4' U B2266 13.417 -33.221 144.060 1.00 58.61 O
ATOM 9 C3' U B2266 13.149 -31.180 142.860 1.00 57.85 C
ATOM 10 O3' U B2266 14.411 -30.944 142.226 1.00 57.45 O
ATOM 11 C2' U B2266 12.405 -32.312 142.163 1.00 57.70 C
ATOM 12 O2' U B2266 12.397 -32.262 140.753 1.00 57.06 O
ATOM 13 C1' U B2266 13.141 -33.530 142.714 1.00 58.04 C
ATOM 14 N1 U B2266 12.358 -34.748 142.683 1.00 58.23 N
ATOM 15 C2 U B2266 12.663 -35.582 141.670 1.00 57.86 C
ATOM 16 O2 U B2266 13.538 -35.311 140.901 1.00 57.42 O
ATOM 17 N3 U B2266 11.948 -36.717 141.569 1.00 58.02 N
ATOM 18 C4 U B2266 10.955 -37.094 142.425 1.00 58.53 C
ATOM 19 O4 U B2266 10.375 -38.181 142.239 1.00 58.65 O
ATOM 20 C5 U B2266 10.699 -36.147 143.483 1.00 58.90 C
ATOM 21 C6 U B2266 11.395 -35.017 143.581 1.00 58.75 C
ATOM 22 P A B2267 14.533 -29.901 141.015 1.00 62.23 P
ATOM 23 OP1 A B2267 15.589 -28.936 141.379 1.00 62.24 O
ATOM 24 OP2 A B2267 13.159 -29.388 140.717 1.00 62.14 O
ATOM 25 O5' A B2267 15.035 -30.831 139.820 1.00 61.76 O
TER
Atoms:
OP1: (15.589,-28.936,141.379)
OP2: (13.159,-29.388,140.717)
C3': (16.670,-31.070,137.342)
C1': (15.533,-33.066,136.811)
C5': (16.325,-31.448,139.871)
O4': (15.828,-33.096,138.183)
C8: (13.206,-32.487,137.609)
O2': (17.626,-32.655,135.783)
C6: (11.105,-32.504,134.734)
C5: (12.063,-32.527,135.781)
C4: (13.372,-32.828,135.462)
P: (14.533,-29.901,141.015)
C4': (16.733,-32.024,138.531)
C2': (16.422,-32.013,136.171)
C2: (12.854,-33.058,133.336)
N1: (11.561,-32.779,133.491)
N3: (13.830,-33.108,134.232)
N6: (9.799,-32.229,134.850)
N7: (11.988,-32.314,137.143)
N9: (14.095,-32.791,136.637)
O5': (15.035,-30.831,139.820)
O3': (17.850,-30.290,137.199)
OP2: (13.159,-29.388,140.717)
C3': (16.670,-31.070,137.342)
C1': (15.533,-33.066,136.811)
C5': (16.325,-31.448,139.871)
O4': (15.828,-33.096,138.183)
C8: (13.206,-32.487,137.609)
O2': (17.626,-32.655,135.783)
C6: (11.105,-32.504,134.734)
C5: (12.063,-32.527,135.781)
C4: (13.372,-32.828,135.462)
P: (14.533,-29.901,141.015)
C4': (16.733,-32.024,138.531)
C2': (16.422,-32.013,136.171)
C2: (12.854,-33.058,133.336)
N1: (11.561,-32.779,133.491)
N3: (13.830,-33.108,134.232)
N6: (9.799,-32.229,134.850)
N7: (11.988,-32.314,137.143)
N9: (14.095,-32.791,136.637)
O5': (15.035,-30.831,139.820)
O3': (17.850,-30.290,137.199)
C4: (10.955,-37.094,142.425)
N3: (11.948,-36.717,141.569)
OP1: (9.739,-33.238,145.208)
OP2: (9.574,-31.089,146.558)
C2: (12.663,-35.582,141.670)
C1': (13.141,-33.530,142.714)
C3': (13.149,-31.180,142.860)
O5': (11.051,-31.217,144.602)
O4': (13.417,-33.221,144.060)
C5': (12.305,-31.457,145.243)
P: (9.741,-31.752,145.260)
C4': (13.377,-31.782,144.245)
C2': (12.405,-32.312,142.163)
O2': (12.397,-32.262,140.753)
N1: (12.358,-34.748,142.683)
O4: (10.375,-38.181,142.239)
O2: (13.538,-35.311,140.901)
C6: (11.395,-35.017,143.581)
C5: (10.699,-36.147,143.483)
O3': (14.411,-30.944,142.226)
N3: (11.948,-36.717,141.569)
OP1: (9.739,-33.238,145.208)
OP2: (9.574,-31.089,146.558)
C2: (12.663,-35.582,141.670)
C1': (13.141,-33.530,142.714)
C3': (13.149,-31.180,142.860)
O5': (11.051,-31.217,144.602)
O4': (13.417,-33.221,144.060)
C5': (12.305,-31.457,145.243)
P: (9.741,-31.752,145.260)
C4': (13.377,-31.782,144.245)
C2': (12.405,-32.312,142.163)
O2': (12.397,-32.262,140.753)
N1: (12.358,-34.748,142.683)
O4: (10.375,-38.181,142.239)
O2: (13.538,-35.311,140.901)
C6: (11.395,-35.017,143.581)
C5: (10.699,-36.147,143.483)
O3': (14.411,-30.944,142.226)
Image (generated by PyMOL):