Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GCA:A12:A11
Extra
PDB:
ATOM 1 O3' U A 11 39.111 39.788 18.880 1.00121.04 O
ATOM 2 P A A 12 38.105 40.976 19.350 1.00122.96 P
ATOM 3 OP1 A A 12 38.853 42.223 19.682 1.00123.15 O
ATOM 4 OP2 A A 12 37.186 40.376 20.364 1.00123.26 O
ATOM 5 O5' A A 12 37.200 41.276 18.076 1.00121.60 O
ATOM 6 C5' A A 12 37.725 41.968 16.956 1.00121.26 C
ATOM 7 C4' A A 12 37.268 41.299 15.684 1.00121.31 C
ATOM 8 O4' A A 12 38.127 40.195 15.309 1.00121.41 O
ATOM 9 C3' A A 12 35.906 40.664 15.811 1.00121.04 C
ATOM 10 O3' A A 12 34.940 41.672 15.694 1.00120.18 O
ATOM 11 C2' A A 12 35.886 39.648 14.679 1.00121.20 C
ATOM 12 O2' A A 12 35.477 40.199 13.445 1.00122.53 O
ATOM 13 C1' A A 12 37.355 39.206 14.642 1.00120.71 C
ATOM 14 N9 A A 12 37.616 37.927 15.296 1.00120.03 N
ATOM 15 C8 A A 12 38.479 37.678 16.340 1.00119.60 C
ATOM 16 N7 A A 12 38.499 36.424 16.717 1.00119.10 N
ATOM 17 C5 A A 12 37.589 35.807 15.868 1.00119.64 C
ATOM 18 C6 A A 12 37.144 34.483 15.765 1.00119.66 C
ATOM 19 N6 A A 12 37.560 33.495 16.561 1.00118.63 N
ATOM 20 N1 A A 12 36.236 34.200 14.806 1.00119.64 N
ATOM 21 C2 A A 12 35.802 35.194 14.016 1.00119.77 C
ATOM 22 N3 A A 12 36.136 36.480 14.024 1.00119.64 N
ATOM 23 C4 A A 12 37.044 36.722 14.985 1.00119.76 C
ATOM 24 P A A 13 33.973 41.952 16.927 1.00121.33 P
ATOM 25 OP1 A A 13 33.635 43.402 16.933 1.00120.68 O
ATOM 26 OP2 A A 13 34.607 41.336 18.123 1.00121.44 O
ATOM 27 O5' A A 13 32.705 41.093 16.525 1.00117.84 O
TER
ATOM 1 O3' G B 10 40.937 36.655 22.271 1.00 98.37 O
ATOM 2 P U B 11 42.320 37.092 21.573 1.00104.43 P
ATOM 3 OP1 U B 11 42.400 36.616 20.156 1.00103.75 O
ATOM 4 OP2 U B 11 43.389 36.724 22.541 1.00103.44 O
ATOM 5 O5' U B 11 42.194 38.680 21.500 1.00107.07 O
ATOM 6 C5' U B 11 40.920 39.325 21.614 1.00111.86 C
ATOM 7 C4' U B 11 40.776 40.380 20.545 1.00115.16 C
ATOM 8 O4' U B 11 42.041 41.058 20.474 1.00116.93 O
ATOM 9 C3' U B 11 40.521 39.887 19.126 1.00117.50 C
ATOM 10 O3' U B 11 39.111 39.788 18.880 1.00121.04 O
ATOM 11 C2' U B 11 41.220 40.905 18.226 1.00117.63 C
ATOM 12 O2' U B 11 40.411 41.945 17.725 1.00118.24 O
ATOM 13 C1' U B 11 42.288 41.482 19.153 1.00118.01 C
ATOM 14 N1 U B 11 43.676 41.147 18.817 1.00119.12 N
ATOM 15 C2 U B 11 44.339 42.018 17.976 1.00119.31 C
ATOM 16 O2 U B 11 43.791 42.991 17.472 1.00118.53 O
ATOM 17 N3 U B 11 45.659 41.707 17.747 1.00119.59 N
ATOM 18 C4 U B 11 46.357 40.623 18.255 1.00120.08 C
ATOM 19 O4 U B 11 47.548 40.485 17.970 1.00120.52 O
ATOM 20 C5 U B 11 45.584 39.750 19.094 1.00120.18 C
ATOM 21 C6 U B 11 44.300 40.034 19.337 1.00119.53 C
ATOM 22 P A B 12 38.105 40.976 19.350 1.00122.96 P
ATOM 23 OP1 A B 12 38.853 42.223 19.682 1.00123.15 O
ATOM 24 OP2 A B 12 37.186 40.376 20.364 1.00123.26 O
ATOM 25 O5' A B 12 37.200 41.276 18.076 1.00121.60 O
TER
ATOM 2 P A A 12 38.105 40.976 19.350 1.00122.96 P
ATOM 3 OP1 A A 12 38.853 42.223 19.682 1.00123.15 O
ATOM 4 OP2 A A 12 37.186 40.376 20.364 1.00123.26 O
ATOM 5 O5' A A 12 37.200 41.276 18.076 1.00121.60 O
ATOM 6 C5' A A 12 37.725 41.968 16.956 1.00121.26 C
ATOM 7 C4' A A 12 37.268 41.299 15.684 1.00121.31 C
ATOM 8 O4' A A 12 38.127 40.195 15.309 1.00121.41 O
ATOM 9 C3' A A 12 35.906 40.664 15.811 1.00121.04 C
ATOM 10 O3' A A 12 34.940 41.672 15.694 1.00120.18 O
ATOM 11 C2' A A 12 35.886 39.648 14.679 1.00121.20 C
ATOM 12 O2' A A 12 35.477 40.199 13.445 1.00122.53 O
ATOM 13 C1' A A 12 37.355 39.206 14.642 1.00120.71 C
ATOM 14 N9 A A 12 37.616 37.927 15.296 1.00120.03 N
ATOM 15 C8 A A 12 38.479 37.678 16.340 1.00119.60 C
ATOM 16 N7 A A 12 38.499 36.424 16.717 1.00119.10 N
ATOM 17 C5 A A 12 37.589 35.807 15.868 1.00119.64 C
ATOM 18 C6 A A 12 37.144 34.483 15.765 1.00119.66 C
ATOM 19 N6 A A 12 37.560 33.495 16.561 1.00118.63 N
ATOM 20 N1 A A 12 36.236 34.200 14.806 1.00119.64 N
ATOM 21 C2 A A 12 35.802 35.194 14.016 1.00119.77 C
ATOM 22 N3 A A 12 36.136 36.480 14.024 1.00119.64 N
ATOM 23 C4 A A 12 37.044 36.722 14.985 1.00119.76 C
ATOM 24 P A A 13 33.973 41.952 16.927 1.00121.33 P
ATOM 25 OP1 A A 13 33.635 43.402 16.933 1.00120.68 O
ATOM 26 OP2 A A 13 34.607 41.336 18.123 1.00121.44 O
ATOM 27 O5' A A 13 32.705 41.093 16.525 1.00117.84 O
TER
ATOM 1 O3' G B 10 40.937 36.655 22.271 1.00 98.37 O
ATOM 2 P U B 11 42.320 37.092 21.573 1.00104.43 P
ATOM 3 OP1 U B 11 42.400 36.616 20.156 1.00103.75 O
ATOM 4 OP2 U B 11 43.389 36.724 22.541 1.00103.44 O
ATOM 5 O5' U B 11 42.194 38.680 21.500 1.00107.07 O
ATOM 6 C5' U B 11 40.920 39.325 21.614 1.00111.86 C
ATOM 7 C4' U B 11 40.776 40.380 20.545 1.00115.16 C
ATOM 8 O4' U B 11 42.041 41.058 20.474 1.00116.93 O
ATOM 9 C3' U B 11 40.521 39.887 19.126 1.00117.50 C
ATOM 10 O3' U B 11 39.111 39.788 18.880 1.00121.04 O
ATOM 11 C2' U B 11 41.220 40.905 18.226 1.00117.63 C
ATOM 12 O2' U B 11 40.411 41.945 17.725 1.00118.24 O
ATOM 13 C1' U B 11 42.288 41.482 19.153 1.00118.01 C
ATOM 14 N1 U B 11 43.676 41.147 18.817 1.00119.12 N
ATOM 15 C2 U B 11 44.339 42.018 17.976 1.00119.31 C
ATOM 16 O2 U B 11 43.791 42.991 17.472 1.00118.53 O
ATOM 17 N3 U B 11 45.659 41.707 17.747 1.00119.59 N
ATOM 18 C4 U B 11 46.357 40.623 18.255 1.00120.08 C
ATOM 19 O4 U B 11 47.548 40.485 17.970 1.00120.52 O
ATOM 20 C5 U B 11 45.584 39.750 19.094 1.00120.18 C
ATOM 21 C6 U B 11 44.300 40.034 19.337 1.00119.53 C
ATOM 22 P A B 12 38.105 40.976 19.350 1.00122.96 P
ATOM 23 OP1 A B 12 38.853 42.223 19.682 1.00123.15 O
ATOM 24 OP2 A B 12 37.186 40.376 20.364 1.00123.26 O
ATOM 25 O5' A B 12 37.200 41.276 18.076 1.00121.60 O
TER
Atoms:
OP1: (38.853,42.223,19.682)
OP2: (37.186,40.376,20.364)
C3': (35.906,40.664,15.811)
C1': (37.355,39.206,14.642)
C5': (37.725,41.968,16.956)
O4': (38.127,40.195,15.309)
C8: (38.479,37.678,16.340)
O2': (35.477,40.199,13.445)
C6: (37.144,34.483,15.765)
C5: (37.589,35.807,15.868)
C4: (37.044,36.722,14.985)
P: (38.105,40.976,19.350)
C4': (37.268,41.299,15.684)
C2': (35.886,39.648,14.679)
C2: (35.802,35.194,14.016)
N1: (36.236,34.200,14.806)
N3: (36.136,36.480,14.024)
N6: (37.560,33.495,16.561)
N7: (38.499,36.424,16.717)
N9: (37.616,37.927,15.296)
O5': (37.200,41.276,18.076)
O3': (34.940,41.672,15.694)
OP2: (37.186,40.376,20.364)
C3': (35.906,40.664,15.811)
C1': (37.355,39.206,14.642)
C5': (37.725,41.968,16.956)
O4': (38.127,40.195,15.309)
C8: (38.479,37.678,16.340)
O2': (35.477,40.199,13.445)
C6: (37.144,34.483,15.765)
C5: (37.589,35.807,15.868)
C4: (37.044,36.722,14.985)
P: (38.105,40.976,19.350)
C4': (37.268,41.299,15.684)
C2': (35.886,39.648,14.679)
C2: (35.802,35.194,14.016)
N1: (36.236,34.200,14.806)
N3: (36.136,36.480,14.024)
N6: (37.560,33.495,16.561)
N7: (38.499,36.424,16.717)
N9: (37.616,37.927,15.296)
O5': (37.200,41.276,18.076)
O3': (34.940,41.672,15.694)
C4: (46.357,40.623,18.255)
N3: (45.659,41.707,17.747)
OP1: (42.400,36.616,20.156)
OP2: (43.389,36.724,22.541)
C2: (44.339,42.018,17.976)
C1': (42.288,41.482,19.153)
C3': (40.521,39.887,19.126)
O5': (42.194,38.680,21.500)
O4': (42.041,41.058,20.474)
C5': (40.920,39.325,21.614)
P: (42.320,37.092,21.573)
C4': (40.776,40.380,20.545)
C2': (41.220,40.905,18.226)
O2': (40.411,41.945,17.725)
N1: (43.676,41.147,18.817)
O4: (47.548,40.485,17.970)
O2: (43.791,42.991,17.472)
C6: (44.300,40.034,19.337)
C5: (45.584,39.750,19.094)
O3': (39.111,39.788,18.880)
N3: (45.659,41.707,17.747)
OP1: (42.400,36.616,20.156)
OP2: (43.389,36.724,22.541)
C2: (44.339,42.018,17.976)
C1': (42.288,41.482,19.153)
C3': (40.521,39.887,19.126)
O5': (42.194,38.680,21.500)
O4': (42.041,41.058,20.474)
C5': (40.920,39.325,21.614)
P: (42.320,37.092,21.573)
C4': (40.776,40.380,20.545)
C2': (41.220,40.905,18.226)
O2': (40.411,41.945,17.725)
N1: (43.676,41.147,18.817)
O4: (47.548,40.485,17.970)
O2: (43.791,42.991,17.472)
C6: (44.300,40.034,19.337)
C5: (45.584,39.750,19.094)
O3': (39.111,39.788,18.880)
Image (generated by PyMOL):