Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12127:12126
Extra
PDB:
ATOM 1 O3' U A2126 -15.714 16.880 88.160 1.00 48.97 O
ATOM 2 P A A2127 -14.923 17.895 87.261 1.00 45.81 P
ATOM 3 OP1 A A2127 -15.758 18.187 86.070 1.00 45.97 O
ATOM 4 OP2 A A2127 -13.590 17.310 87.042 1.00 45.34 O
ATOM 5 O5' A A2127 -14.839 19.186 88.221 1.00 46.15 O
ATOM 6 C5' A A2127 -16.018 19.920 88.564 1.00 46.65 C
ATOM 7 C4' A A2127 -15.997 20.407 89.985 1.00 46.91 C
ATOM 8 O4' A A2127 -16.060 19.279 90.882 1.00 46.80 O
ATOM 9 C3' A A2127 -14.755 21.162 90.426 1.00 46.81 C
ATOM 10 O3' A A2127 -14.771 22.520 90.055 1.00 47.07 O
ATOM 11 C2' A A2127 -14.742 20.940 91.936 1.00 46.95 C
ATOM 12 O2' A A2127 -15.642 21.813 92.598 1.00 47.46 O
ATOM 13 C1' A A2127 -15.285 19.523 92.034 1.00 46.81 C
ATOM 14 N9 A A2127 -14.194 18.552 92.068 1.00 46.34 N
ATOM 15 C8 A A2127 -13.708 17.740 91.083 1.00 45.92 C
ATOM 16 N7 A A2127 -12.704 17.000 91.439 1.00 45.58 N
ATOM 17 C5 A A2127 -12.505 17.382 92.739 1.00 45.79 C
ATOM 18 C6 A A2127 -11.581 16.977 93.666 1.00 45.62 C
ATOM 19 N6 A A2127 -10.648 16.091 93.420 1.00 45.20 N
ATOM 20 N1 A A2127 -11.650 17.539 94.871 1.00 45.93 N
ATOM 21 C2 A A2127 -12.594 18.458 95.110 1.00 46.37 C
ATOM 22 N3 A A2127 -13.548 18.957 94.333 1.00 46.58 N
ATOM 23 C4 A A2127 -13.414 18.345 93.143 1.00 46.25 C
ATOM 24 P A A2128 -13.477 23.183 89.368 1.00 47.41 P
ATOM 25 OP1 A A2128 -13.795 24.627 89.142 1.00 47.80 O
ATOM 26 OP2 A A2128 -13.094 22.325 88.181 1.00 46.99 O
ATOM 27 O5' A A2128 -12.387 23.059 90.505 1.00 47.26 O
TER
ATOM 1 O3' U B2125 -17.816 11.664 84.252 1.00 48.23 O
ATOM 2 P U B2126 -17.053 13.065 84.208 1.00 48.27 P
ATOM 3 OP1 U B2126 -17.918 14.011 83.410 1.00 48.60 O
ATOM 4 OP2 U B2126 -15.640 12.807 83.741 1.00 47.82 O
ATOM 5 O5' U B2126 -17.093 13.458 85.734 1.00 48.48 O
ATOM 6 C5' U B2126 -16.893 14.770 86.173 1.00 48.69 C
ATOM 7 C4' U B2126 -16.620 14.750 87.627 1.00 48.76 C
ATOM 8 O4' U B2126 -16.324 13.404 88.039 1.00 48.50 O
ATOM 9 C3' U B2126 -15.431 15.525 88.087 1.00 48.64 C
ATOM 10 O3' U B2126 -15.714 16.880 88.160 1.00 48.97 O
ATOM 11 C2' U B2126 -15.158 14.893 89.442 1.00 48.61 C
ATOM 12 O2' U B2126 -16.104 15.349 90.420 1.00 49.05 O
ATOM 13 C1' U B2126 -15.467 13.430 89.144 1.00 48.40 C
ATOM 14 N1 U B2126 -14.257 12.659 88.828 1.00 47.93 N
ATOM 15 C2 U B2126 -13.542 12.220 89.933 1.00 47.81 C
ATOM 16 O2 U B2126 -13.896 12.442 91.103 1.00 48.08 O
ATOM 17 N3 U B2126 -12.408 11.521 89.611 1.00 47.39 N
ATOM 18 C4 U B2126 -11.976 11.215 88.349 1.00 47.09 C
ATOM 19 O4 U B2126 -10.954 10.562 88.243 1.00 46.74 O
ATOM 20 C5 U B2126 -12.773 11.690 87.274 1.00 47.24 C
ATOM 21 C6 U B2126 -13.861 12.388 87.544 1.00 47.65 C
ATOM 22 P A B2127 -14.923 17.895 87.261 1.00 45.81 P
ATOM 23 OP1 A B2127 -15.758 18.187 86.070 1.00 45.97 O
ATOM 24 OP2 A B2127 -13.590 17.310 87.042 1.00 45.34 O
ATOM 25 O5' A B2127 -14.839 19.186 88.221 1.00 46.15 O
TER
ATOM 2 P A A2127 -14.923 17.895 87.261 1.00 45.81 P
ATOM 3 OP1 A A2127 -15.758 18.187 86.070 1.00 45.97 O
ATOM 4 OP2 A A2127 -13.590 17.310 87.042 1.00 45.34 O
ATOM 5 O5' A A2127 -14.839 19.186 88.221 1.00 46.15 O
ATOM 6 C5' A A2127 -16.018 19.920 88.564 1.00 46.65 C
ATOM 7 C4' A A2127 -15.997 20.407 89.985 1.00 46.91 C
ATOM 8 O4' A A2127 -16.060 19.279 90.882 1.00 46.80 O
ATOM 9 C3' A A2127 -14.755 21.162 90.426 1.00 46.81 C
ATOM 10 O3' A A2127 -14.771 22.520 90.055 1.00 47.07 O
ATOM 11 C2' A A2127 -14.742 20.940 91.936 1.00 46.95 C
ATOM 12 O2' A A2127 -15.642 21.813 92.598 1.00 47.46 O
ATOM 13 C1' A A2127 -15.285 19.523 92.034 1.00 46.81 C
ATOM 14 N9 A A2127 -14.194 18.552 92.068 1.00 46.34 N
ATOM 15 C8 A A2127 -13.708 17.740 91.083 1.00 45.92 C
ATOM 16 N7 A A2127 -12.704 17.000 91.439 1.00 45.58 N
ATOM 17 C5 A A2127 -12.505 17.382 92.739 1.00 45.79 C
ATOM 18 C6 A A2127 -11.581 16.977 93.666 1.00 45.62 C
ATOM 19 N6 A A2127 -10.648 16.091 93.420 1.00 45.20 N
ATOM 20 N1 A A2127 -11.650 17.539 94.871 1.00 45.93 N
ATOM 21 C2 A A2127 -12.594 18.458 95.110 1.00 46.37 C
ATOM 22 N3 A A2127 -13.548 18.957 94.333 1.00 46.58 N
ATOM 23 C4 A A2127 -13.414 18.345 93.143 1.00 46.25 C
ATOM 24 P A A2128 -13.477 23.183 89.368 1.00 47.41 P
ATOM 25 OP1 A A2128 -13.795 24.627 89.142 1.00 47.80 O
ATOM 26 OP2 A A2128 -13.094 22.325 88.181 1.00 46.99 O
ATOM 27 O5' A A2128 -12.387 23.059 90.505 1.00 47.26 O
TER
ATOM 1 O3' U B2125 -17.816 11.664 84.252 1.00 48.23 O
ATOM 2 P U B2126 -17.053 13.065 84.208 1.00 48.27 P
ATOM 3 OP1 U B2126 -17.918 14.011 83.410 1.00 48.60 O
ATOM 4 OP2 U B2126 -15.640 12.807 83.741 1.00 47.82 O
ATOM 5 O5' U B2126 -17.093 13.458 85.734 1.00 48.48 O
ATOM 6 C5' U B2126 -16.893 14.770 86.173 1.00 48.69 C
ATOM 7 C4' U B2126 -16.620 14.750 87.627 1.00 48.76 C
ATOM 8 O4' U B2126 -16.324 13.404 88.039 1.00 48.50 O
ATOM 9 C3' U B2126 -15.431 15.525 88.087 1.00 48.64 C
ATOM 10 O3' U B2126 -15.714 16.880 88.160 1.00 48.97 O
ATOM 11 C2' U B2126 -15.158 14.893 89.442 1.00 48.61 C
ATOM 12 O2' U B2126 -16.104 15.349 90.420 1.00 49.05 O
ATOM 13 C1' U B2126 -15.467 13.430 89.144 1.00 48.40 C
ATOM 14 N1 U B2126 -14.257 12.659 88.828 1.00 47.93 N
ATOM 15 C2 U B2126 -13.542 12.220 89.933 1.00 47.81 C
ATOM 16 O2 U B2126 -13.896 12.442 91.103 1.00 48.08 O
ATOM 17 N3 U B2126 -12.408 11.521 89.611 1.00 47.39 N
ATOM 18 C4 U B2126 -11.976 11.215 88.349 1.00 47.09 C
ATOM 19 O4 U B2126 -10.954 10.562 88.243 1.00 46.74 O
ATOM 20 C5 U B2126 -12.773 11.690 87.274 1.00 47.24 C
ATOM 21 C6 U B2126 -13.861 12.388 87.544 1.00 47.65 C
ATOM 22 P A B2127 -14.923 17.895 87.261 1.00 45.81 P
ATOM 23 OP1 A B2127 -15.758 18.187 86.070 1.00 45.97 O
ATOM 24 OP2 A B2127 -13.590 17.310 87.042 1.00 45.34 O
ATOM 25 O5' A B2127 -14.839 19.186 88.221 1.00 46.15 O
TER
Atoms:
OP1: (-15.758,18.187,86.070)
OP2: (-13.590,17.310,87.042)
C3': (-14.755,21.162,90.426)
C1': (-15.285,19.523,92.034)
C5': (-16.018,19.920,88.564)
O4': (-16.060,19.279,90.882)
C8: (-13.708,17.740,91.083)
O2': (-15.642,21.813,92.598)
C6: (-11.581,16.977,93.666)
C5: (-12.505,17.382,92.739)
C4: (-13.414,18.345,93.143)
P: (-14.923,17.895,87.261)
C4': (-15.997,20.407,89.985)
C2': (-14.742,20.940,91.936)
C2: (-12.594,18.458,95.110)
N1: (-11.650,17.539,94.871)
N3: (-13.548,18.957,94.333)
N6: (-10.648,16.091,93.420)
N7: (-12.704,17.000,91.439)
N9: (-14.194,18.552,92.068)
O5': (-14.839,19.186,88.221)
O3': (-14.771,22.520,90.055)
OP2: (-13.590,17.310,87.042)
C3': (-14.755,21.162,90.426)
C1': (-15.285,19.523,92.034)
C5': (-16.018,19.920,88.564)
O4': (-16.060,19.279,90.882)
C8: (-13.708,17.740,91.083)
O2': (-15.642,21.813,92.598)
C6: (-11.581,16.977,93.666)
C5: (-12.505,17.382,92.739)
C4: (-13.414,18.345,93.143)
P: (-14.923,17.895,87.261)
C4': (-15.997,20.407,89.985)
C2': (-14.742,20.940,91.936)
C2: (-12.594,18.458,95.110)
N1: (-11.650,17.539,94.871)
N3: (-13.548,18.957,94.333)
N6: (-10.648,16.091,93.420)
N7: (-12.704,17.000,91.439)
N9: (-14.194,18.552,92.068)
O5': (-14.839,19.186,88.221)
O3': (-14.771,22.520,90.055)
C4: (-11.976,11.215,88.349)
N3: (-12.408,11.521,89.611)
OP1: (-17.918,14.011,83.410)
OP2: (-15.640,12.807,83.741)
C2: (-13.542,12.220,89.933)
C1': (-15.467,13.430,89.144)
C3': (-15.431,15.525,88.087)
O5': (-17.093,13.458,85.734)
O4': (-16.324,13.404,88.039)
C5': (-16.893,14.770,86.173)
P: (-17.053,13.065,84.208)
C4': (-16.620,14.750,87.627)
C2': (-15.158,14.893,89.442)
O2': (-16.104,15.349,90.420)
N1: (-14.257,12.659,88.828)
O4: (-10.954,10.562,88.243)
O2: (-13.896,12.442,91.103)
C6: (-13.861,12.388,87.544)
C5: (-12.773,11.690,87.274)
O3': (-15.714,16.880,88.160)
N3: (-12.408,11.521,89.611)
OP1: (-17.918,14.011,83.410)
OP2: (-15.640,12.807,83.741)
C2: (-13.542,12.220,89.933)
C1': (-15.467,13.430,89.144)
C3': (-15.431,15.525,88.087)
O5': (-17.093,13.458,85.734)
O4': (-16.324,13.404,88.039)
C5': (-16.893,14.770,86.173)
P: (-17.053,13.065,84.208)
C4': (-16.620,14.750,87.627)
C2': (-15.158,14.893,89.442)
O2': (-16.104,15.349,90.420)
N1: (-14.257,12.659,88.828)
O4: (-10.954,10.562,88.243)
O2: (-13.896,12.442,91.103)
C6: (-13.861,12.388,87.544)
C5: (-12.773,11.690,87.274)
O3': (-15.714,16.880,88.160)
Image (generated by PyMOL):