Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1462:A1461
Extra
PDB:
ATOM 1 O3' U A1461 4.499 -34.301 11.991 1.00 0.96 O
ATOM 2 P A A1462 4.079 -32.766 12.081 1.00 0.01 P
ATOM 3 OP1 A A1462 3.370 -32.439 10.830 1.00 0.01 O
ATOM 4 OP2 A A1462 5.285 -31.987 12.447 1.00 0.01 O
ATOM 5 O5' A A1462 3.062 -32.763 13.288 1.00 0.01 O
ATOM 6 C5' A A1462 1.789 -33.345 13.148 1.00 0.01 C
ATOM 7 C4' A A1462 1.311 -33.904 14.454 1.00 0.01 C
ATOM 8 O4' A A1462 1.992 -35.141 14.725 1.00 0.01 O
ATOM 9 C3' A A1462 1.575 -33.043 15.673 1.00 0.01 C
ATOM 10 O3' A A1462 0.556 -32.080 15.867 1.00 0.01 O
ATOM 11 C2' A A1462 1.641 -34.068 16.781 1.00 0.01 C
ATOM 12 O2' A A1462 0.336 -34.466 17.147 1.00 0.01 O
ATOM 13 C1' A A1462 2.302 -35.235 16.081 1.00 0.01 C
ATOM 14 N9 A A1462 3.769 -35.241 16.221 1.00 0.01 N
ATOM 15 C8 A A1462 4.698 -35.133 15.216 1.00 0.01 C
ATOM 16 N7 A A1462 5.941 -35.219 15.599 1.00 0.01 N
ATOM 17 C5 A A1462 5.797 -35.426 16.940 1.00 0.01 C
ATOM 18 C6 A A1462 6.740 -35.619 17.917 1.00 0.01 C
ATOM 19 N6 A A1462 8.039 -35.593 17.654 1.00 0.01 N
ATOM 20 N1 A A1462 6.308 -35.826 19.174 1.00 0.01 N
ATOM 21 C2 A A1462 4.997 -35.819 19.406 1.00 0.01 C
ATOM 22 N3 A A1462 4.005 -35.649 18.553 1.00 0.01 N
ATOM 23 C4 A A1462 4.490 -35.462 17.335 1.00 0.01 C
ATOM 24 P A A1463 0.880 -30.627 16.474 1.00 1.05 P
ATOM 25 OP1 A A1463 -0.269 -29.757 16.126 1.00 1.05 O
ATOM 26 OP2 A A1463 2.236 -30.245 15.992 1.00 1.05 O
ATOM 27 O5' A A1463 0.910 -30.892 18.065 1.00 1.05 O
TER
ATOM 1 O3' U B1460 2.254 -36.131 5.718 1.00 6.62 O
ATOM 2 P U B1461 2.451 -34.760 6.516 1.00 0.96 P
ATOM 3 OP1 U B1461 1.151 -34.031 6.517 1.00 0.96 O
ATOM 4 OP2 U B1461 3.644 -34.108 5.906 1.00 0.96 O
ATOM 5 O5' U B1461 2.796 -35.274 7.990 1.00 0.96 O
ATOM 6 C5' U B1461 3.717 -34.570 8.820 1.00 0.96 C
ATOM 7 C4' U B1461 4.348 -35.484 9.854 1.00 0.96 C
ATOM 8 O4' U B1461 5.224 -36.446 9.201 1.00 0.96 O
ATOM 9 C3' U B1461 5.235 -34.807 10.892 1.00 0.96 C
ATOM 10 O3' U B1461 4.499 -34.301 11.991 1.00 0.96 O
ATOM 11 C2' U B1461 6.182 -35.929 11.301 1.00 0.96 C
ATOM 12 O2' U B1461 5.572 -36.784 12.258 1.00 0.96 O
ATOM 13 C1' U B1461 6.351 -36.703 10.009 1.00 0.96 C
ATOM 14 N1 U B1461 7.581 -36.302 9.288 1.00 0.77 N
ATOM 15 C2 U B1461 8.774 -36.604 9.899 1.00 0.77 C
ATOM 16 O2 U B1461 8.812 -37.153 10.959 1.00 0.77 O
ATOM 17 N3 U B1461 9.899 -36.244 9.237 1.00 0.77 N
ATOM 18 C4 U B1461 9.941 -35.601 8.036 1.00 0.77 C
ATOM 19 O4 U B1461 11.019 -35.338 7.558 1.00 0.77 O
ATOM 20 C5 U B1461 8.695 -35.294 7.435 1.00 0.77 C
ATOM 21 C6 U B1461 7.573 -35.652 8.071 1.00 0.77 C
ATOM 22 P A B1462 4.079 -32.766 12.081 1.00 0.01 P
ATOM 23 OP1 A B1462 3.370 -32.439 10.830 1.00 0.01 O
ATOM 24 OP2 A B1462 5.285 -31.987 12.447 1.00 0.01 O
ATOM 25 O5' A B1462 3.062 -32.763 13.288 1.00 0.01 O
TER
ATOM 2 P A A1462 4.079 -32.766 12.081 1.00 0.01 P
ATOM 3 OP1 A A1462 3.370 -32.439 10.830 1.00 0.01 O
ATOM 4 OP2 A A1462 5.285 -31.987 12.447 1.00 0.01 O
ATOM 5 O5' A A1462 3.062 -32.763 13.288 1.00 0.01 O
ATOM 6 C5' A A1462 1.789 -33.345 13.148 1.00 0.01 C
ATOM 7 C4' A A1462 1.311 -33.904 14.454 1.00 0.01 C
ATOM 8 O4' A A1462 1.992 -35.141 14.725 1.00 0.01 O
ATOM 9 C3' A A1462 1.575 -33.043 15.673 1.00 0.01 C
ATOM 10 O3' A A1462 0.556 -32.080 15.867 1.00 0.01 O
ATOM 11 C2' A A1462 1.641 -34.068 16.781 1.00 0.01 C
ATOM 12 O2' A A1462 0.336 -34.466 17.147 1.00 0.01 O
ATOM 13 C1' A A1462 2.302 -35.235 16.081 1.00 0.01 C
ATOM 14 N9 A A1462 3.769 -35.241 16.221 1.00 0.01 N
ATOM 15 C8 A A1462 4.698 -35.133 15.216 1.00 0.01 C
ATOM 16 N7 A A1462 5.941 -35.219 15.599 1.00 0.01 N
ATOM 17 C5 A A1462 5.797 -35.426 16.940 1.00 0.01 C
ATOM 18 C6 A A1462 6.740 -35.619 17.917 1.00 0.01 C
ATOM 19 N6 A A1462 8.039 -35.593 17.654 1.00 0.01 N
ATOM 20 N1 A A1462 6.308 -35.826 19.174 1.00 0.01 N
ATOM 21 C2 A A1462 4.997 -35.819 19.406 1.00 0.01 C
ATOM 22 N3 A A1462 4.005 -35.649 18.553 1.00 0.01 N
ATOM 23 C4 A A1462 4.490 -35.462 17.335 1.00 0.01 C
ATOM 24 P A A1463 0.880 -30.627 16.474 1.00 1.05 P
ATOM 25 OP1 A A1463 -0.269 -29.757 16.126 1.00 1.05 O
ATOM 26 OP2 A A1463 2.236 -30.245 15.992 1.00 1.05 O
ATOM 27 O5' A A1463 0.910 -30.892 18.065 1.00 1.05 O
TER
ATOM 1 O3' U B1460 2.254 -36.131 5.718 1.00 6.62 O
ATOM 2 P U B1461 2.451 -34.760 6.516 1.00 0.96 P
ATOM 3 OP1 U B1461 1.151 -34.031 6.517 1.00 0.96 O
ATOM 4 OP2 U B1461 3.644 -34.108 5.906 1.00 0.96 O
ATOM 5 O5' U B1461 2.796 -35.274 7.990 1.00 0.96 O
ATOM 6 C5' U B1461 3.717 -34.570 8.820 1.00 0.96 C
ATOM 7 C4' U B1461 4.348 -35.484 9.854 1.00 0.96 C
ATOM 8 O4' U B1461 5.224 -36.446 9.201 1.00 0.96 O
ATOM 9 C3' U B1461 5.235 -34.807 10.892 1.00 0.96 C
ATOM 10 O3' U B1461 4.499 -34.301 11.991 1.00 0.96 O
ATOM 11 C2' U B1461 6.182 -35.929 11.301 1.00 0.96 C
ATOM 12 O2' U B1461 5.572 -36.784 12.258 1.00 0.96 O
ATOM 13 C1' U B1461 6.351 -36.703 10.009 1.00 0.96 C
ATOM 14 N1 U B1461 7.581 -36.302 9.288 1.00 0.77 N
ATOM 15 C2 U B1461 8.774 -36.604 9.899 1.00 0.77 C
ATOM 16 O2 U B1461 8.812 -37.153 10.959 1.00 0.77 O
ATOM 17 N3 U B1461 9.899 -36.244 9.237 1.00 0.77 N
ATOM 18 C4 U B1461 9.941 -35.601 8.036 1.00 0.77 C
ATOM 19 O4 U B1461 11.019 -35.338 7.558 1.00 0.77 O
ATOM 20 C5 U B1461 8.695 -35.294 7.435 1.00 0.77 C
ATOM 21 C6 U B1461 7.573 -35.652 8.071 1.00 0.77 C
ATOM 22 P A B1462 4.079 -32.766 12.081 1.00 0.01 P
ATOM 23 OP1 A B1462 3.370 -32.439 10.830 1.00 0.01 O
ATOM 24 OP2 A B1462 5.285 -31.987 12.447 1.00 0.01 O
ATOM 25 O5' A B1462 3.062 -32.763 13.288 1.00 0.01 O
TER
Atoms:
OP1: (3.370,-32.439,10.830)
OP2: (5.285,-31.987,12.447)
C3': (1.575,-33.043,15.673)
C1': (2.302,-35.235,16.081)
C5': (1.789,-33.345,13.148)
O4': (1.992,-35.141,14.725)
C8: (4.698,-35.133,15.216)
O2': (0.336,-34.466,17.147)
C6: (6.740,-35.619,17.917)
C5: (5.797,-35.426,16.940)
C4: (4.490,-35.462,17.335)
P: (4.079,-32.766,12.081)
C4': (1.311,-33.904,14.454)
C2': (1.641,-34.068,16.781)
C2: (4.997,-35.819,19.406)
N1: (6.308,-35.826,19.174)
N3: (4.005,-35.649,18.553)
N6: (8.039,-35.593,17.654)
N7: (5.941,-35.219,15.599)
N9: (3.769,-35.241,16.221)
O5': (3.062,-32.763,13.288)
O3': (0.556,-32.080,15.867)
OP2: (5.285,-31.987,12.447)
C3': (1.575,-33.043,15.673)
C1': (2.302,-35.235,16.081)
C5': (1.789,-33.345,13.148)
O4': (1.992,-35.141,14.725)
C8: (4.698,-35.133,15.216)
O2': (0.336,-34.466,17.147)
C6: (6.740,-35.619,17.917)
C5: (5.797,-35.426,16.940)
C4: (4.490,-35.462,17.335)
P: (4.079,-32.766,12.081)
C4': (1.311,-33.904,14.454)
C2': (1.641,-34.068,16.781)
C2: (4.997,-35.819,19.406)
N1: (6.308,-35.826,19.174)
N3: (4.005,-35.649,18.553)
N6: (8.039,-35.593,17.654)
N7: (5.941,-35.219,15.599)
N9: (3.769,-35.241,16.221)
O5': (3.062,-32.763,13.288)
O3': (0.556,-32.080,15.867)
C4: (9.941,-35.601,8.036)
N3: (9.899,-36.244,9.237)
OP1: (1.151,-34.031,6.517)
OP2: (3.644,-34.108,5.906)
C2: (8.774,-36.604,9.899)
C1': (6.351,-36.703,10.009)
C3': (5.235,-34.807,10.892)
O5': (2.796,-35.274,7.990)
O4': (5.224,-36.446,9.201)
C5': (3.717,-34.570,8.820)
P: (2.451,-34.760,6.516)
C4': (4.348,-35.484,9.854)
C2': (6.182,-35.929,11.301)
O2': (5.572,-36.784,12.258)
N1: (7.581,-36.302,9.288)
O4: (11.019,-35.338,7.558)
O2: (8.812,-37.153,10.959)
C6: (7.573,-35.652,8.071)
C5: (8.695,-35.294,7.435)
O3': (4.499,-34.301,11.991)
N3: (9.899,-36.244,9.237)
OP1: (1.151,-34.031,6.517)
OP2: (3.644,-34.108,5.906)
C2: (8.774,-36.604,9.899)
C1': (6.351,-36.703,10.009)
C3': (5.235,-34.807,10.892)
O5': (2.796,-35.274,7.990)
O4': (5.224,-36.446,9.201)
C5': (3.717,-34.570,8.820)
P: (2.451,-34.760,6.516)
C4': (4.348,-35.484,9.854)
C2': (6.182,-35.929,11.301)
O2': (5.572,-36.784,12.258)
N1: (7.581,-36.302,9.288)
O4: (11.019,-35.338,7.558)
O2: (8.812,-37.153,10.959)
C6: (7.573,-35.652,8.071)
C5: (8.695,-35.294,7.435)
O3': (4.499,-34.301,11.991)
Image (generated by PyMOL):