ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A334:A333

Extra

PDB:
ATOM 1 O3' U A 333 145.720 27.131 4.896 1.00 88.69 O
ATOM 2 P A A 334 147.130 26.370 5.100 1.00 89.81 P
ATOM 3 OP1 A A 334 148.117 26.913 4.114 1.00 89.08 O
ATOM 4 OP2 A A 334 147.428 26.433 6.557 1.00 89.00 O
ATOM 5 O5' A A 334 146.799 24.856 4.692 1.00 91.10 O
ATOM 6 C5' A A 334 147.417 24.208 3.546 1.00 92.55 C
ATOM 7 C4' A A 334 146.442 23.230 2.926 1.00 93.77 C
ATOM 8 O4' A A 334 145.805 22.519 4.017 1.00 94.07 O
ATOM 9 C3' A A 334 145.316 23.898 2.147 1.00 94.76 C
ATOM 10 O3' A A 334 145.688 24.091 0.743 1.00 96.52 O
ATOM 11 C2' A A 334 144.066 23.070 2.459 1.00 94.35 C
ATOM 12 O2' A A 334 143.754 22.025 1.568 1.00 94.30 O
ATOM 13 C1' A A 334 144.404 22.481 3.831 1.00 94.37 C
ATOM 14 N9 A A 334 143.792 23.113 4.999 1.00 94.57 N
ATOM 15 C8 A A 334 143.913 24.411 5.430 1.00 94.82 C
ATOM 16 N7 A A 334 143.296 24.652 6.563 1.00 95.48 N
ATOM 17 C5 A A 334 142.713 23.435 6.892 1.00 95.31 C
ATOM 18 C6 A A 334 141.918 23.022 7.986 1.00 95.20 C
ATOM 19 N6 A A 334 141.564 23.820 8.996 1.00 94.88 N
ATOM 20 N1 A A 334 141.497 21.739 8.004 1.00 95.16 N
ATOM 21 C2 A A 334 141.853 20.934 6.995 1.00 95.20 C
ATOM 22 N3 A A 334 142.593 21.201 5.920 1.00 95.11 N
ATOM 23 C4 A A 334 142.998 22.483 5.928 1.00 95.12 C
ATOM 24 P C A 335 145.927 22.820 -0.240 1.00 97.04 P
ATOM 25 OP1 C A 335 147.017 22.004 0.369 1.00 96.74 O
ATOM 26 OP2 C A 335 144.620 22.196 -0.577 1.00 96.64 O
ATOM 27 O5' C A 335 146.537 23.452 -1.589 1.00 97.38 O
TER

ATOM 1 O3' C B 332 145.495 32.575 7.926 1.00 81.19 O
ATOM 2 P U B 333 146.605 31.421 7.719 1.00 82.50 P
ATOM 3 OP1 U B 333 147.910 32.082 7.384 1.00 81.48 O
ATOM 4 OP2 U B 333 146.515 30.519 8.898 1.00 82.47 O
ATOM 5 O5' U B 333 146.113 30.643 6.410 1.00 82.70 O
ATOM 6 C5' U B 333 144.878 29.903 6.413 1.00 83.67 C
ATOM 7 C4' U B 333 144.604 29.317 5.047 1.00 85.06 C
ATOM 8 O4' U B 333 144.393 30.385 4.085 1.00 84.87 O
ATOM 9 C3' U B 333 145.704 28.472 4.422 1.00 86.49 C
ATOM 10 O3' U B 333 145.720 27.131 4.896 1.00 88.69 O
ATOM 11 C2' U B 333 145.355 28.534 2.938 1.00 85.90 C
ATOM 12 O2' U B 333 144.346 27.611 2.579 1.00 85.64 O
ATOM 13 C1' U B 333 144.817 29.959 2.799 1.00 84.86 C
ATOM 14 N1 U B 333 145.836 30.890 2.283 1.00 84.09 N
ATOM 15 C2 U B 333 146.038 30.926 0.902 1.00 84.27 C
ATOM 16 O2 U B 333 145.391 30.255 0.111 1.00 83.89 O
ATOM 17 N3 U B 333 147.031 31.777 0.483 1.00 84.08 N
ATOM 18 C4 U B 333 147.825 32.583 1.273 1.00 84.33 C
ATOM 19 O4 U B 333 148.716 33.257 0.746 1.00 84.38 O
ATOM 20 C5 U B 333 147.543 32.507 2.679 1.00 84.00 C
ATOM 21 C6 U B 333 146.583 31.686 3.124 1.00 83.65 C
ATOM 22 P A B 334 147.130 26.370 5.100 1.00 89.81 P
ATOM 23 OP1 A B 334 148.117 26.913 4.114 1.00 89.08 O
ATOM 24 OP2 A B 334 147.428 26.433 6.557 1.00 89.00 O
ATOM 25 O5' A B 334 146.799 24.856 4.692 1.00 91.10 O
TER

Atoms:
OP1: (148.117,26.913,4.114)
OP2: (147.428,26.433,6.557)
C3': (145.316,23.898,2.147)
C1': (144.404,22.481,3.831)
C5': (147.417,24.208,3.546)
O4': (145.805,22.519,4.017)
C8: (143.913,24.411,5.430)
O2': (143.754,22.025,1.568)
C6: (141.918,23.022,7.986)
C5: (142.713,23.435,6.892)
C4: (142.998,22.483,5.928)
P: (147.130,26.370,5.100)
C4': (146.442,23.230,2.926)
C2': (144.066,23.070,2.459)
C2: (141.853,20.934,6.995)
N1: (141.497,21.739,8.004)
N3: (142.593,21.201,5.920)
N6: (141.564,23.820,8.996)
N7: (143.296,24.652,6.563)
N9: (143.792,23.113,4.999)
O5': (146.799,24.856,4.692)
O3': (145.688,24.091,0.743)
C4: (147.825,32.583,1.273)
N3: (147.031,31.777,0.483)
OP1: (147.910,32.082,7.384)
OP2: (146.515,30.519,8.898)
C2: (146.038,30.926,0.902)
C1': (144.817,29.959,2.799)
C3': (145.704,28.472,4.422)
O5': (146.113,30.643,6.410)
O4': (144.393,30.385,4.085)
C5': (144.878,29.903,6.413)
P: (146.605,31.421,7.719)
C4': (144.604,29.317,5.047)
C2': (145.355,28.534,2.938)
O2': (144.346,27.611,2.579)
N1: (145.836,30.890,2.283)
O4: (148.716,33.257,0.746)
O2: (145.391,30.255,0.111)
C6: (146.583,31.686,3.124)
C5: (147.543,32.507,2.679)
O3': (145.720,27.131,4.896)
Image (generated by PyMOL):
PyMOL image
show in jmol