Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2CKY:A28:A43
Extra
PDB:
ATOM 1 O3' G A 27 8.465 5.042 -41.736 1.00 34.97 O
ATOM 2 P A A 28 9.545 3.886 -41.551 1.00 35.78 P
ATOM 3 OP1 A A 28 8.682 2.707 -41.328 1.00 37.65 O
ATOM 4 OP2 A A 28 10.611 4.308 -40.615 1.00 35.58 O
ATOM 5 O5' A A 28 10.186 3.643 -42.977 1.00 34.20 O
ATOM 6 C5' A A 28 11.524 3.982 -43.250 1.00 34.86 C
ATOM 7 C4' A A 28 11.560 4.246 -44.736 1.00 34.53 C
ATOM 8 O4' A A 28 10.282 3.847 -45.244 1.00 33.50 O
ATOM 9 C3' A A 28 11.593 5.682 -45.178 1.00 33.56 C
ATOM 10 O3' A A 28 12.900 6.198 -45.104 1.00 33.56 O
ATOM 11 C2' A A 28 11.084 5.574 -46.594 1.00 33.44 C
ATOM 12 O2' A A 28 12.137 5.223 -47.451 1.00 34.47 O
ATOM 13 C1' A A 28 10.045 4.468 -46.474 1.00 33.83 C
ATOM 14 N9 A A 28 8.647 4.866 -46.430 1.00 33.20 N
ATOM 15 C8 A A 28 7.694 4.513 -45.507 1.00 33.31 C
ATOM 16 N7 A A 28 6.510 5.031 -45.734 1.00 32.75 N
ATOM 17 C5 A A 28 6.698 5.772 -46.889 1.00 32.18 C
ATOM 18 C6 A A 28 5.833 6.561 -47.665 1.00 31.98 C
ATOM 19 N6 A A 28 4.547 6.786 -47.401 1.00 31.83 N
ATOM 20 N1 A A 28 6.354 7.147 -48.745 1.00 33.04 N
ATOM 21 C2 A A 28 7.654 6.964 -49.019 1.00 33.65 C
ATOM 22 N3 A A 28 8.568 6.250 -48.382 1.00 33.02 N
ATOM 23 C4 A A 28 8.010 5.676 -47.321 1.00 32.67 C
ATOM 24 P G A 29 13.028 7.586 -44.336 1.00 31.99 P
ATOM 25 OP1 G A 29 14.462 7.913 -44.234 1.00 33.02 O
ATOM 26 OP2 G A 29 12.224 7.593 -43.084 1.00 31.24 O
ATOM 27 O5' G A 29 12.328 8.474 -45.441 1.00 29.34 O
TER
ATOM 1 O3' A B 42 -1.550 3.350 -46.969 1.00 31.65 O
ATOM 2 P A B 43 -0.092 3.042 -47.533 1.00 31.45 P
ATOM 3 OP1 A B 43 0.003 1.655 -48.035 1.00 32.88 O
ATOM 4 OP2 A B 43 0.938 3.450 -46.561 1.00 28.87 O
ATOM 5 O5' A B 43 -0.179 3.908 -48.877 1.00 32.22 O
ATOM 6 C5' A B 43 0.045 5.284 -48.906 1.00 32.51 C
ATOM 7 C4' A B 43 1.083 5.679 -49.931 1.00 33.27 C
ATOM 8 O4' A B 43 0.706 5.230 -51.267 1.00 35.29 O
ATOM 9 C3' A B 43 1.224 7.185 -50.051 1.00 33.44 C
ATOM 10 O3' A B 43 2.116 7.693 -49.086 1.00 33.26 O
ATOM 11 C2' A B 43 1.777 7.300 -51.456 1.00 35.11 C
ATOM 12 O2' A B 43 3.162 6.997 -51.477 1.00 36.25 O
ATOM 13 C1' A B 43 0.971 6.245 -52.219 1.00 36.12 C
ATOM 14 N9 A B 43 -0.294 6.639 -52.864 1.00 36.39 N
ATOM 15 C8 A B 43 -1.561 6.415 -52.414 1.00 36.24 C
ATOM 16 N7 A B 43 -2.511 6.854 -53.202 1.00 35.95 N
ATOM 17 C5 A B 43 -1.832 7.403 -54.254 1.00 36.92 C
ATOM 18 C6 A B 43 -2.271 8.047 -55.428 1.00 39.09 C
ATOM 19 N6 A B 43 -3.569 8.227 -55.714 1.00 39.67 N
ATOM 20 N1 A B 43 -1.327 8.511 -56.298 1.00 39.81 N
ATOM 21 C2 A B 43 -0.023 8.342 -56.010 1.00 38.85 C
ATOM 22 N3 A B 43 0.492 7.746 -54.924 1.00 39.17 N
ATOM 23 C4 A B 43 -0.465 7.291 -54.072 1.00 37.65 C
ATOM 24 P C B 44 1.557 8.636 -47.919 1.00 34.89 P
ATOM 25 OP1 C B 44 2.694 8.980 -47.032 1.00 32.21 O
ATOM 26 OP2 C B 44 0.264 8.103 -47.408 1.00 33.71 O
ATOM 27 O5' C B 44 1.265 9.952 -48.743 1.00 36.49 O
TER
ATOM 2 P A A 28 9.545 3.886 -41.551 1.00 35.78 P
ATOM 3 OP1 A A 28 8.682 2.707 -41.328 1.00 37.65 O
ATOM 4 OP2 A A 28 10.611 4.308 -40.615 1.00 35.58 O
ATOM 5 O5' A A 28 10.186 3.643 -42.977 1.00 34.20 O
ATOM 6 C5' A A 28 11.524 3.982 -43.250 1.00 34.86 C
ATOM 7 C4' A A 28 11.560 4.246 -44.736 1.00 34.53 C
ATOM 8 O4' A A 28 10.282 3.847 -45.244 1.00 33.50 O
ATOM 9 C3' A A 28 11.593 5.682 -45.178 1.00 33.56 C
ATOM 10 O3' A A 28 12.900 6.198 -45.104 1.00 33.56 O
ATOM 11 C2' A A 28 11.084 5.574 -46.594 1.00 33.44 C
ATOM 12 O2' A A 28 12.137 5.223 -47.451 1.00 34.47 O
ATOM 13 C1' A A 28 10.045 4.468 -46.474 1.00 33.83 C
ATOM 14 N9 A A 28 8.647 4.866 -46.430 1.00 33.20 N
ATOM 15 C8 A A 28 7.694 4.513 -45.507 1.00 33.31 C
ATOM 16 N7 A A 28 6.510 5.031 -45.734 1.00 32.75 N
ATOM 17 C5 A A 28 6.698 5.772 -46.889 1.00 32.18 C
ATOM 18 C6 A A 28 5.833 6.561 -47.665 1.00 31.98 C
ATOM 19 N6 A A 28 4.547 6.786 -47.401 1.00 31.83 N
ATOM 20 N1 A A 28 6.354 7.147 -48.745 1.00 33.04 N
ATOM 21 C2 A A 28 7.654 6.964 -49.019 1.00 33.65 C
ATOM 22 N3 A A 28 8.568 6.250 -48.382 1.00 33.02 N
ATOM 23 C4 A A 28 8.010 5.676 -47.321 1.00 32.67 C
ATOM 24 P G A 29 13.028 7.586 -44.336 1.00 31.99 P
ATOM 25 OP1 G A 29 14.462 7.913 -44.234 1.00 33.02 O
ATOM 26 OP2 G A 29 12.224 7.593 -43.084 1.00 31.24 O
ATOM 27 O5' G A 29 12.328 8.474 -45.441 1.00 29.34 O
TER
ATOM 1 O3' A B 42 -1.550 3.350 -46.969 1.00 31.65 O
ATOM 2 P A B 43 -0.092 3.042 -47.533 1.00 31.45 P
ATOM 3 OP1 A B 43 0.003 1.655 -48.035 1.00 32.88 O
ATOM 4 OP2 A B 43 0.938 3.450 -46.561 1.00 28.87 O
ATOM 5 O5' A B 43 -0.179 3.908 -48.877 1.00 32.22 O
ATOM 6 C5' A B 43 0.045 5.284 -48.906 1.00 32.51 C
ATOM 7 C4' A B 43 1.083 5.679 -49.931 1.00 33.27 C
ATOM 8 O4' A B 43 0.706 5.230 -51.267 1.00 35.29 O
ATOM 9 C3' A B 43 1.224 7.185 -50.051 1.00 33.44 C
ATOM 10 O3' A B 43 2.116 7.693 -49.086 1.00 33.26 O
ATOM 11 C2' A B 43 1.777 7.300 -51.456 1.00 35.11 C
ATOM 12 O2' A B 43 3.162 6.997 -51.477 1.00 36.25 O
ATOM 13 C1' A B 43 0.971 6.245 -52.219 1.00 36.12 C
ATOM 14 N9 A B 43 -0.294 6.639 -52.864 1.00 36.39 N
ATOM 15 C8 A B 43 -1.561 6.415 -52.414 1.00 36.24 C
ATOM 16 N7 A B 43 -2.511 6.854 -53.202 1.00 35.95 N
ATOM 17 C5 A B 43 -1.832 7.403 -54.254 1.00 36.92 C
ATOM 18 C6 A B 43 -2.271 8.047 -55.428 1.00 39.09 C
ATOM 19 N6 A B 43 -3.569 8.227 -55.714 1.00 39.67 N
ATOM 20 N1 A B 43 -1.327 8.511 -56.298 1.00 39.81 N
ATOM 21 C2 A B 43 -0.023 8.342 -56.010 1.00 38.85 C
ATOM 22 N3 A B 43 0.492 7.746 -54.924 1.00 39.17 N
ATOM 23 C4 A B 43 -0.465 7.291 -54.072 1.00 37.65 C
ATOM 24 P C B 44 1.557 8.636 -47.919 1.00 34.89 P
ATOM 25 OP1 C B 44 2.694 8.980 -47.032 1.00 32.21 O
ATOM 26 OP2 C B 44 0.264 8.103 -47.408 1.00 33.71 O
ATOM 27 O5' C B 44 1.265 9.952 -48.743 1.00 36.49 O
TER
Atoms:
OP1: (8.682,2.707,-41.328)
OP2: (10.611,4.308,-40.615)
C3': (11.593,5.682,-45.178)
C1': (10.045,4.468,-46.474)
C5': (11.524,3.982,-43.250)
O4': (10.282,3.847,-45.244)
C8: (7.694,4.513,-45.507)
O2': (12.137,5.223,-47.451)
C6: (5.833,6.561,-47.665)
C5: (6.698,5.772,-46.889)
C4: (8.010,5.676,-47.321)
P: (9.545,3.886,-41.551)
C4': (11.560,4.246,-44.736)
C2': (11.084,5.574,-46.594)
C2: (7.654,6.964,-49.019)
N1: (6.354,7.147,-48.745)
N3: (8.568,6.250,-48.382)
N6: (4.547,6.786,-47.401)
N7: (6.510,5.031,-45.734)
N9: (8.647,4.866,-46.430)
O5': (10.186,3.643,-42.977)
O3': (12.900,6.198,-45.104)
OP2: (10.611,4.308,-40.615)
C3': (11.593,5.682,-45.178)
C1': (10.045,4.468,-46.474)
C5': (11.524,3.982,-43.250)
O4': (10.282,3.847,-45.244)
C8: (7.694,4.513,-45.507)
O2': (12.137,5.223,-47.451)
C6: (5.833,6.561,-47.665)
C5: (6.698,5.772,-46.889)
C4: (8.010,5.676,-47.321)
P: (9.545,3.886,-41.551)
C4': (11.560,4.246,-44.736)
C2': (11.084,5.574,-46.594)
C2: (7.654,6.964,-49.019)
N1: (6.354,7.147,-48.745)
N3: (8.568,6.250,-48.382)
N6: (4.547,6.786,-47.401)
N7: (6.510,5.031,-45.734)
N9: (8.647,4.866,-46.430)
O5': (10.186,3.643,-42.977)
O3': (12.900,6.198,-45.104)
OP1: (0.003,1.655,-48.035)
OP2: (0.938,3.450,-46.561)
C3': (1.224,7.185,-50.051)
C1': (0.971,6.245,-52.219)
C5': (0.045,5.284,-48.906)
O4': (0.706,5.230,-51.267)
C8: (-1.561,6.415,-52.414)
O2': (3.162,6.997,-51.477)
C6: (-2.271,8.047,-55.428)
C5: (-1.832,7.403,-54.254)
C4: (-0.465,7.291,-54.072)
P: (-0.092,3.042,-47.533)
C4': (1.083,5.679,-49.931)
C2': (1.777,7.300,-51.456)
C2: (-0.023,8.342,-56.010)
N1: (-1.327,8.511,-56.298)
N3: (0.492,7.746,-54.924)
N6: (-3.569,8.227,-55.714)
N7: (-2.511,6.854,-53.202)
N9: (-0.294,6.639,-52.864)
O5': (-0.179,3.908,-48.877)
O3': (2.116,7.693,-49.086)
OP2: (0.938,3.450,-46.561)
C3': (1.224,7.185,-50.051)
C1': (0.971,6.245,-52.219)
C5': (0.045,5.284,-48.906)
O4': (0.706,5.230,-51.267)
C8: (-1.561,6.415,-52.414)
O2': (3.162,6.997,-51.477)
C6: (-2.271,8.047,-55.428)
C5: (-1.832,7.403,-54.254)
C4: (-0.465,7.291,-54.072)
P: (-0.092,3.042,-47.533)
C4': (1.083,5.679,-49.931)
C2': (1.777,7.300,-51.456)
C2: (-0.023,8.342,-56.010)
N1: (-1.327,8.511,-56.298)
N3: (0.492,7.746,-54.924)
N6: (-3.569,8.227,-55.714)
N7: (-2.511,6.854,-53.202)
N9: (-0.294,6.639,-52.864)
O5': (-0.179,3.908,-48.877)
O3': (2.116,7.693,-49.086)
Image (generated by PyMOL):