ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01912:01916

Extra

PDB:
ATOM 1 O3' C A1911 112.238 89.008 95.768 1.00 96.35 O
ATOM 2 P U A1912 112.178 89.522 94.244 1.00 95.48 P
ATOM 3 OP1 U A1912 111.680 88.416 93.383 1.00 94.95 O
ATOM 4 OP2 U A1912 113.484 90.164 93.932 1.00 95.02 O
ATOM 5 O5' U A1912 111.066 90.660 94.280 1.00 95.51 O
ATOM 6 C5' U A1912 109.687 90.334 94.540 1.00 94.82 C
ATOM 7 C4' U A1912 108.825 91.568 94.425 1.00 94.58 C
ATOM 8 O4' U A1912 109.154 92.497 95.493 1.00 93.81 O
ATOM 9 C3' U A1912 109.015 92.386 93.159 1.00 94.19 C
ATOM 10 O3' U A1912 108.314 91.847 92.048 1.00 94.25 O
ATOM 11 C2' U A1912 108.496 93.751 93.584 1.00 93.61 C
ATOM 12 O2' U A1912 107.084 93.818 93.601 1.00 93.93 O
ATOM 13 C1' U A1912 109.022 93.829 95.019 1.00 93.25 C
ATOM 14 N1 U A1912 110.334 94.491 95.117 1.00 92.51 N
ATOM 15 C2 U A1912 110.373 95.772 95.645 1.00 91.51 C
ATOM 16 O2 U A1912 109.372 96.371 96.027 1.00 90.40 O
ATOM 17 N3 U A1912 111.628 96.328 95.713 1.00 90.49 N
ATOM 18 C4 U A1912 112.821 95.753 95.321 1.00 89.52 C
ATOM 19 O4 U A1912 113.872 96.361 95.508 1.00 87.79 O
ATOM 20 C5 U A1912 112.699 94.436 94.779 1.00 90.05 C
ATOM 21 C6 U A1912 111.495 93.862 94.698 1.00 91.66 C
ATOM 22 P U A1913 108.957 91.955 90.579 1.00 95.01 P
ATOM 23 OP1 U A1913 107.975 91.364 89.631 1.00 94.47 O
ATOM 24 OP2 U A1913 110.346 91.416 90.633 1.00 93.58 O
ATOM 25 O5' U A1913 109.035 93.526 90.314 1.00 93.90 O
TER

ATOM 1 O3' A B1915 119.580 102.263 95.404 1.00 61.54 O
ATOM 2 P G B1916 119.652 101.625 96.879 1.00 62.79 P
ATOM 3 OP1 G B1916 120.977 101.988 97.443 1.00 61.96 O
ATOM 4 OP2 G B1916 119.254 100.198 96.809 1.00 63.08 O
ATOM 5 O5' G B1916 118.530 102.406 97.694 1.00 61.40 O
ATOM 6 C5' G B1916 118.583 103.835 97.855 1.00 60.30 C
ATOM 7 C4' G B1916 117.403 104.301 98.668 1.00 60.23 C
ATOM 8 O4' G B1916 116.180 104.036 97.918 1.00 60.52 O
ATOM 9 C3' G B1916 117.246 103.573 100.006 1.00 60.52 C
ATOM 10 O3' G B1916 116.664 104.410 101.001 1.00 61.53 O
ATOM 11 C2' G B1916 116.205 102.516 99.669 1.00 60.29 C
ATOM 12 O2' G B1916 115.486 102.060 100.793 1.00 59.90 O
ATOM 13 C1' G B1916 115.297 103.311 98.740 1.00 61.16 C
ATOM 14 N9 G B1916 114.380 102.513 97.929 1.00 62.47 N
ATOM 15 C8 G B1916 113.042 102.765 97.740 1.00 62.55 C
ATOM 16 N7 G B1916 112.430 101.822 97.076 1.00 62.22 N
ATOM 17 C5 G B1916 113.428 100.903 96.787 1.00 62.90 C
ATOM 18 C6 G B1916 113.357 99.657 96.116 1.00 63.35 C
ATOM 19 O6 G B1916 112.360 99.085 95.654 1.00 62.32 O
ATOM 20 N1 G B1916 114.612 99.059 96.017 1.00 63.98 N
ATOM 21 C2 G B1916 115.780 99.587 96.512 1.00 63.24 C
ATOM 22 N2 G B1916 116.891 98.871 96.288 1.00 63.70 N
ATOM 23 N3 G B1916 115.854 100.733 97.168 1.00 63.09 N
ATOM 24 C4 G B1916 114.649 101.334 97.269 1.00 62.73 C
ATOM 25 P G B1917 117.406 105.752 101.463 1.00 61.31 P
ATOM 26 OP1 G B1917 118.840 105.647 101.090 1.00 60.23 O
ATOM 27 OP2 G B1917 117.028 106.007 102.879 1.00 58.51 O
ATOM 28 O5' G B1917 116.677 106.859 100.574 1.00 62.89 O
TER

Atoms:
C4: (112.821,95.753,95.321)
N3: (111.628,96.328,95.713)
OP1: (111.680,88.416,93.383)
OP2: (113.484,90.164,93.932)
C2: (110.373,95.772,95.645)
C1': (109.022,93.829,95.019)
C3': (109.015,92.386,93.159)
O5': (111.066,90.660,94.280)
O4': (109.154,92.497,95.493)
C5': (109.687,90.334,94.540)
P: (112.178,89.522,94.244)
C4': (108.825,91.568,94.425)
C2': (108.496,93.751,93.584)
O2': (107.084,93.818,93.601)
N1: (110.334,94.491,95.117)
O4: (113.872,96.361,95.508)
O2: (109.372,96.371,96.027)
C6: (111.495,93.862,94.698)
C5: (112.699,94.436,94.779)
O3': (108.314,91.847,92.048)
OP1: (120.977,101.988,97.443)
OP2: (119.254,100.198,96.809)
C3': (117.246,103.573,100.006)
C1': (115.297,103.311,98.740)
C5': (118.583,103.835,97.855)
O6: (112.360,99.085,95.654)
O4': (116.180,104.036,97.918)
C8: (113.042,102.765,97.740)
C2: (115.780,99.587,96.512)
C6: (113.357,99.657,96.116)
C5: (113.428,100.903,96.787)
C4: (114.649,101.334,97.269)
P: (119.652,101.625,96.879)
C4': (117.403,104.301,98.668)
C2': (116.205,102.516,99.669)
O2': (115.486,102.060,100.793)
N1: (114.612,99.059,96.017)
N2: (116.891,98.871,96.288)
N3: (115.854,100.733,97.168)
N7: (112.430,101.822,97.076)
N9: (114.380,102.513,97.929)
O5': (118.530,102.406,97.694)
O3': (116.664,104.410,101.001)
Image (generated by PyMOL):
PyMOL image
show in jmol