Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1F:A2598:A2045
Extra
PDB:
ATOM 1 O3' U A2597 -10.661 113.374 183.548 1.00 42.77 O
ATOM 2 P A A2598 -11.541 112.136 184.051 1.00 34.60 P
ATOM 3 OP1 A A2598 -11.017 111.657 185.365 1.00 26.99 O
ATOM 4 OP2 A A2598 -11.678 111.217 182.890 1.00 43.52 O
ATOM 5 O5' A A2598 -12.973 112.805 184.272 1.00 31.09 O
ATOM 6 C5' A A2598 -13.024 113.990 185.008 1.00 32.82 C
ATOM 7 C4' A A2598 -14.222 113.935 185.918 1.00 32.02 C
ATOM 8 O4' A A2598 -15.378 113.768 185.072 1.00 29.60 O
ATOM 9 C3' A A2598 -14.194 112.759 186.884 1.00 31.95 C
ATOM 10 O3' A A2598 -14.687 113.125 188.167 1.00 27.50 O
ATOM 11 C2' A A2598 -15.115 111.757 186.205 1.00 36.30 C
ATOM 12 O2' A A2598 -15.809 110.978 187.144 1.00 49.80 O
ATOM 13 C1' A A2598 -16.115 112.656 185.510 1.00 35.28 C
ATOM 14 N9 A A2598 -16.686 112.033 184.325 1.00 45.67 N
ATOM 15 C8 A A2598 -16.014 111.409 183.305 1.00 52.76 C
ATOM 16 N7 A A2598 -16.807 110.945 182.360 1.00 57.17 N
ATOM 17 C5 A A2598 -18.080 111.291 182.789 1.00 51.84 C
ATOM 18 C6 A A2598 -19.358 111.086 182.241 1.00 53.64 C
ATOM 19 N6 A A2598 -19.562 110.457 181.088 1.00 63.06 N
ATOM 20 N1 A A2598 -20.420 111.549 182.918 1.00 46.65 N
ATOM 21 C2 A A2598 -20.203 112.180 184.073 1.00 49.76 C
ATOM 22 N3 A A2598 -19.056 112.433 184.699 1.00 46.36 N
ATOM 23 C4 A A2598 -18.021 111.959 183.996 1.00 48.82 C
ATOM 24 P U A2599 -13.716 113.315 189.429 1.00 47.63 P
ATOM 25 OP1 U A2599 -12.333 113.644 189.012 1.00 42.69 O
ATOM 26 OP2 U A2599 -13.940 112.196 190.354 1.00 50.74 O
ATOM 27 O5' U A2599 -14.402 114.592 190.077 1.00 34.76 O
TER
ATOM 1 O3' C B2044 -17.407 103.072 179.748 1.00 26.56 O
ATOM 2 P A B2045 -17.335 104.164 178.577 1.00 34.42 P
ATOM 3 OP1 A B2045 -17.555 103.488 177.263 1.00 34.34 O
ATOM 4 OP2 A B2045 -16.108 104.964 178.766 1.00 39.37 O
ATOM 5 O5' A B2045 -18.568 105.121 178.934 1.00 45.35 O
ATOM 6 C5' A B2045 -19.809 104.887 178.300 1.00 48.04 C
ATOM 7 C4' A B2045 -20.977 105.361 179.135 1.00 40.36 C
ATOM 8 O4' A B2045 -20.537 105.489 180.507 1.00 38.28 O
ATOM 9 C3' A B2045 -21.563 106.712 178.756 1.00 38.11 C
ATOM 10 O3' A B2045 -22.923 106.716 179.135 1.00 31.64 O
ATOM 11 C2' A B2045 -20.797 107.666 179.658 1.00 49.07 C
ATOM 12 O2' A B2045 -21.555 108.828 179.930 1.00 47.96 O
ATOM 13 C1' A B2045 -20.676 106.831 180.930 1.00 47.95 C
ATOM 14 N9 A B2045 -19.539 107.135 181.800 1.00 43.80 N
ATOM 15 C8 A B2045 -18.232 106.782 181.613 1.00 50.60 C
ATOM 16 N7 A B2045 -17.428 107.179 182.572 1.00 53.91 N
ATOM 17 C5 A B2045 -18.261 107.833 183.452 1.00 44.21 C
ATOM 18 C6 A B2045 -18.012 108.480 184.668 1.00 47.90 C
ATOM 19 N6 A B2045 -16.801 108.573 185.215 1.00 56.26 N
ATOM 20 N1 A B2045 -19.056 109.033 185.302 1.00 46.83 N
ATOM 21 C2 A B2045 -20.261 108.932 184.731 1.00 53.39 C
ATOM 22 N3 A B2045 -20.622 108.351 183.588 1.00 48.95 N
ATOM 23 C4 A B2045 -19.559 107.812 182.993 1.00 42.77 C
ATOM 24 P G B2046 -24.117 106.365 178.128 1.00 32.97 P
ATOM 25 OP1 G B2046 -24.067 104.961 177.666 1.00 45.38 O
ATOM 26 OP2 G B2046 -24.203 107.451 177.119 1.00 44.11 O
ATOM 27 O5' G B2046 -25.330 106.518 179.167 1.00 40.02 O
TER
ATOM 2 P A A2598 -11.541 112.136 184.051 1.00 34.60 P
ATOM 3 OP1 A A2598 -11.017 111.657 185.365 1.00 26.99 O
ATOM 4 OP2 A A2598 -11.678 111.217 182.890 1.00 43.52 O
ATOM 5 O5' A A2598 -12.973 112.805 184.272 1.00 31.09 O
ATOM 6 C5' A A2598 -13.024 113.990 185.008 1.00 32.82 C
ATOM 7 C4' A A2598 -14.222 113.935 185.918 1.00 32.02 C
ATOM 8 O4' A A2598 -15.378 113.768 185.072 1.00 29.60 O
ATOM 9 C3' A A2598 -14.194 112.759 186.884 1.00 31.95 C
ATOM 10 O3' A A2598 -14.687 113.125 188.167 1.00 27.50 O
ATOM 11 C2' A A2598 -15.115 111.757 186.205 1.00 36.30 C
ATOM 12 O2' A A2598 -15.809 110.978 187.144 1.00 49.80 O
ATOM 13 C1' A A2598 -16.115 112.656 185.510 1.00 35.28 C
ATOM 14 N9 A A2598 -16.686 112.033 184.325 1.00 45.67 N
ATOM 15 C8 A A2598 -16.014 111.409 183.305 1.00 52.76 C
ATOM 16 N7 A A2598 -16.807 110.945 182.360 1.00 57.17 N
ATOM 17 C5 A A2598 -18.080 111.291 182.789 1.00 51.84 C
ATOM 18 C6 A A2598 -19.358 111.086 182.241 1.00 53.64 C
ATOM 19 N6 A A2598 -19.562 110.457 181.088 1.00 63.06 N
ATOM 20 N1 A A2598 -20.420 111.549 182.918 1.00 46.65 N
ATOM 21 C2 A A2598 -20.203 112.180 184.073 1.00 49.76 C
ATOM 22 N3 A A2598 -19.056 112.433 184.699 1.00 46.36 N
ATOM 23 C4 A A2598 -18.021 111.959 183.996 1.00 48.82 C
ATOM 24 P U A2599 -13.716 113.315 189.429 1.00 47.63 P
ATOM 25 OP1 U A2599 -12.333 113.644 189.012 1.00 42.69 O
ATOM 26 OP2 U A2599 -13.940 112.196 190.354 1.00 50.74 O
ATOM 27 O5' U A2599 -14.402 114.592 190.077 1.00 34.76 O
TER
ATOM 1 O3' C B2044 -17.407 103.072 179.748 1.00 26.56 O
ATOM 2 P A B2045 -17.335 104.164 178.577 1.00 34.42 P
ATOM 3 OP1 A B2045 -17.555 103.488 177.263 1.00 34.34 O
ATOM 4 OP2 A B2045 -16.108 104.964 178.766 1.00 39.37 O
ATOM 5 O5' A B2045 -18.568 105.121 178.934 1.00 45.35 O
ATOM 6 C5' A B2045 -19.809 104.887 178.300 1.00 48.04 C
ATOM 7 C4' A B2045 -20.977 105.361 179.135 1.00 40.36 C
ATOM 8 O4' A B2045 -20.537 105.489 180.507 1.00 38.28 O
ATOM 9 C3' A B2045 -21.563 106.712 178.756 1.00 38.11 C
ATOM 10 O3' A B2045 -22.923 106.716 179.135 1.00 31.64 O
ATOM 11 C2' A B2045 -20.797 107.666 179.658 1.00 49.07 C
ATOM 12 O2' A B2045 -21.555 108.828 179.930 1.00 47.96 O
ATOM 13 C1' A B2045 -20.676 106.831 180.930 1.00 47.95 C
ATOM 14 N9 A B2045 -19.539 107.135 181.800 1.00 43.80 N
ATOM 15 C8 A B2045 -18.232 106.782 181.613 1.00 50.60 C
ATOM 16 N7 A B2045 -17.428 107.179 182.572 1.00 53.91 N
ATOM 17 C5 A B2045 -18.261 107.833 183.452 1.00 44.21 C
ATOM 18 C6 A B2045 -18.012 108.480 184.668 1.00 47.90 C
ATOM 19 N6 A B2045 -16.801 108.573 185.215 1.00 56.26 N
ATOM 20 N1 A B2045 -19.056 109.033 185.302 1.00 46.83 N
ATOM 21 C2 A B2045 -20.261 108.932 184.731 1.00 53.39 C
ATOM 22 N3 A B2045 -20.622 108.351 183.588 1.00 48.95 N
ATOM 23 C4 A B2045 -19.559 107.812 182.993 1.00 42.77 C
ATOM 24 P G B2046 -24.117 106.365 178.128 1.00 32.97 P
ATOM 25 OP1 G B2046 -24.067 104.961 177.666 1.00 45.38 O
ATOM 26 OP2 G B2046 -24.203 107.451 177.119 1.00 44.11 O
ATOM 27 O5' G B2046 -25.330 106.518 179.167 1.00 40.02 O
TER
Atoms:
OP1: (-11.017,111.657,185.365)
OP2: (-11.678,111.217,182.890)
C3': (-14.194,112.759,186.884)
C1': (-16.115,112.656,185.510)
C5': (-13.024,113.990,185.008)
O4': (-15.378,113.768,185.072)
C8: (-16.014,111.409,183.305)
O2': (-15.809,110.978,187.144)
C6: (-19.358,111.086,182.241)
C5: (-18.080,111.291,182.789)
C4: (-18.021,111.959,183.996)
P: (-11.541,112.136,184.051)
C4': (-14.222,113.935,185.918)
C2': (-15.115,111.757,186.205)
C2: (-20.203,112.180,184.073)
N1: (-20.420,111.549,182.918)
N3: (-19.056,112.433,184.699)
N6: (-19.562,110.457,181.088)
N7: (-16.807,110.945,182.360)
N9: (-16.686,112.033,184.325)
O5': (-12.973,112.805,184.272)
O3': (-14.687,113.125,188.167)
OP2: (-11.678,111.217,182.890)
C3': (-14.194,112.759,186.884)
C1': (-16.115,112.656,185.510)
C5': (-13.024,113.990,185.008)
O4': (-15.378,113.768,185.072)
C8: (-16.014,111.409,183.305)
O2': (-15.809,110.978,187.144)
C6: (-19.358,111.086,182.241)
C5: (-18.080,111.291,182.789)
C4: (-18.021,111.959,183.996)
P: (-11.541,112.136,184.051)
C4': (-14.222,113.935,185.918)
C2': (-15.115,111.757,186.205)
C2: (-20.203,112.180,184.073)
N1: (-20.420,111.549,182.918)
N3: (-19.056,112.433,184.699)
N6: (-19.562,110.457,181.088)
N7: (-16.807,110.945,182.360)
N9: (-16.686,112.033,184.325)
O5': (-12.973,112.805,184.272)
O3': (-14.687,113.125,188.167)
OP1: (-17.555,103.488,177.263)
OP2: (-16.108,104.964,178.766)
C3': (-21.563,106.712,178.756)
C1': (-20.676,106.831,180.930)
C5': (-19.809,104.887,178.300)
O4': (-20.537,105.489,180.507)
C8: (-18.232,106.782,181.613)
O2': (-21.555,108.828,179.930)
C6: (-18.012,108.480,184.668)
C5: (-18.261,107.833,183.452)
C4: (-19.559,107.812,182.993)
P: (-17.335,104.164,178.577)
C4': (-20.977,105.361,179.135)
C2': (-20.797,107.666,179.658)
C2: (-20.261,108.932,184.731)
N1: (-19.056,109.033,185.302)
N3: (-20.622,108.351,183.588)
N6: (-16.801,108.573,185.215)
N7: (-17.428,107.179,182.572)
N9: (-19.539,107.135,181.800)
O5': (-18.568,105.121,178.934)
O3': (-22.923,106.716,179.135)
OP2: (-16.108,104.964,178.766)
C3': (-21.563,106.712,178.756)
C1': (-20.676,106.831,180.930)
C5': (-19.809,104.887,178.300)
O4': (-20.537,105.489,180.507)
C8: (-18.232,106.782,181.613)
O2': (-21.555,108.828,179.930)
C6: (-18.012,108.480,184.668)
C5: (-18.261,107.833,183.452)
C4: (-19.559,107.812,182.993)
P: (-17.335,104.164,178.577)
C4': (-20.977,105.361,179.135)
C2': (-20.797,107.666,179.658)
C2: (-20.261,108.932,184.731)
N1: (-19.056,109.033,185.302)
N3: (-20.622,108.351,183.588)
N6: (-16.801,108.573,185.215)
N7: (-17.428,107.179,182.572)
N9: (-19.539,107.135,181.800)
O5': (-18.568,105.121,178.934)
O3': (-22.923,106.716,179.135)
Image (generated by PyMOL):